NO02G05740, NO02G05740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05740 vs. NCBI_GenBank
Match: BAF22967.2 (Os08g0161900 [Oryza sativa Japonica Group]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY L + R A ++++ ++YRRMA+K HPDK P +K+ EAE KFK I EAYEVL+DP+KR IYD YGEEGL+AS Sbjct: 4 DYYNVLKVNRNATEEDLKKSYRRMAMKWHPDKNPGDKKKEAEAKFKKISEAYEVLSDPQKRAIYDKYGEEGLKAS 78
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_003915098.1 (dnaJ homolog subfamily B member 1 isoform X1 [Papio anubis] >XP_005588308.1 PREDICTED: dnaJ homolog subfamily B member 1 isoform X1 [Macaca fascicularis] >XP_010359868.1 PREDICTED: dnaJ homolog subfamily B member 1 [Rhinopithecus roxellana] >XP_011808604.1 PREDICTED: dnaJ homolog subfamily B member 1 [Colobus angolensis palliatus] >XP_011766219.1 dnaJ homolog subfamily B member 1 isoform X1 [Macaca nemestrina] >XP_011949556.1 PREDICTED: dnaJ homolog subfamily B member 1 [Cercocebus atys] >XP_014978629.1 PREDICTED: dnaJ homolog subfamily B member 1 isoform X1 [Macaca mulatta] >XP_017706731.1 PREDICTED: dnaJ homolog subfamily B member 1 isoform X1 [Rhinopithecus bieti] >XP_023085664.1 dnaJ homolog subfamily B member 1 [Piliocolobus tephrosceles]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY LGL RGA+ +EI RAYRR A++ HPDK NK P AE+KFK I EAY+VL+DP KR+I+D YGEEGL+ S Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK---NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75
BLAST of NO02G05740 vs. NCBI_GenBank
Match: 1HDJ_A (Chain A, Human Hsp40 (Hdj-1), Nmr) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY LGL RGA+ +EI RAYRR A++ HPDK NK P AE+KFK I EAY+VL+DP KR+I+D YGEEGL+ S Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK---NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_006918828.1 (PREDICTED: dnaJ homolog subfamily B member 1 [Pteropus alecto] >ELK06766.1 DnaJ like protein subfamily B member 1 [Pteropus alecto]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY LGL RGA+ +EI RAYRR A++ HPDK NK P AE+KFK I EAY+VL+DP KR+I+D YGEEGL+ S Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK---NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75
BLAST of NO02G05740 vs. NCBI_GenBank
Match: EMP39449.1 (DnaJ like protein subfamily B member 5 [Chelonia mydas]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLR 207 DYY LGL+ GAN+ EI +AYR+MA+K HPDK NK P AE+KFK I EAY+VL+DP+KR +YD YGEEGL+ Sbjct: 4 DYYKTLGLQSGANEDEIKKAYRKMALKYHPDK---NKDPSAEEKFKEIAEAYDVLSDPKKRAVYDQYGEEGLK 73
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_004277461.1 (PREDICTED: dnaJ homolog subfamily B member 1 [Orcinus orca] >XP_004312324.1 PREDICTED: dnaJ homolog subfamily B member 1 [Tursiops truncatus] >XP_007129498.1 dnaJ homolog subfamily B member 1 [Physeter catodon] >XP_007469104.1 PREDICTED: dnaJ homolog subfamily B member 1 [Lipotes vexillifer]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY LGL RGA+ +EI RAYRR A++ HPDK NK P AE+KFK I EAY+VL+DP KR+I+D YGEEGL+ S Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK---NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_004688740.1 (PREDICTED: dnaJ homolog subfamily B member 1 [Condylura cristata]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLRAS 209 DYY LGL RGA+ +EI RAYRR A++ HPDK NK P AE+KFK I EAY+VL+DP KR+I+D YGEEGL+ S Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK---NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_005311745.1 (dnaJ homolog subfamily B member 5 isoform X1 [Chrysemys picta bellii]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLR 207 DYY LGL+ GAN+ EI +AYR+MA+K HPDK NK P AE+KFK I EAY+VL+DP+KR +YD YGEEGL+ Sbjct: 38 DYYKTLGLQSGANEDEIKKAYRKMALKYHPDK---NKDPSAEEKFKEIAEAYDVLSDPKKRAVYDQYGEEGLK 107
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_005311746.1 (dnaJ homolog subfamily B member 5 isoform X2 [Chrysemys picta bellii]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLR 207 DYY LGL+ GAN+ EI +AYR+MA+K HPDK NK P AE+KFK I EAY+VL+DP+KR +YD YGEEGL+ Sbjct: 28 DYYKTLGLQSGANEDEIKKAYRKMALKYHPDK---NKDPSAEEKFKEIAEAYDVLSDPKKRAVYDQYGEEGLK 97
BLAST of NO02G05740 vs. NCBI_GenBank
Match: XP_005311747.1 (dnaJ homolog subfamily B member 5 isoform X3 [Chrysemys picta bellii] >XP_005311748.1 dnaJ homolog subfamily B member 5 isoform X3 [Chrysemys picta bellii]) HSP 1 Score: 96.3 bits (238), Expect = 1.900e-16 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 134 DYYTRLGLKRGANKKEIARAYRRMAVKTHPDKVPVNKRPEAEKKFKSICEAYEVLNDPEKRKIYDTYGEEGLR 207 DYY LGL+ GAN+ EI +AYR+MA+K HPDK NK P AE+KFK I EAY+VL+DP+KR +YD YGEEGL+ Sbjct: 4 DYYKTLGLQSGANEDEIKKAYRKMALKYHPDK---NKDPSAEEKFKEIAEAYDVLSDPKKRAVYDQYGEEGLK 73 The following BLAST results are available for this feature:
BLAST of NO02G05740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05740 ID=NO02G05740|Name=NO02G05740|organism=Nannochloropsis oceanica|type=gene|length=4923bpback to top protein sequence of NO02G05740.1 >NO02G05740.1-protein ID=NO02G05740.1-protein|Name=NO02G05740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
|