NO02G05420, NO02G05420 (gene) Nannochloropsis oceanica

Overview
NameNO02G05420
Unique NameNO02G05420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3314
Alignment locationchr2:1443893..1447206 +

Link to JBrowse

Properties
Property NameValue
DescriptionFatty acid desaturase domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1443893..1447206 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005804Fatty_acid_desaturase-1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_100737683.1 (fatty acid desaturase [Leptospira sp. JW3-C-A1] >PJZ41512.1 fatty acid desaturase [Leptospira sp. JW3-C-A1])

HSP 1 Score: 213.4 bits (542), Expect = 1.400e-51
Identity = 136/337 (40.36%), Postives = 188/337 (55.79%), Query Frame = 0
Query:   66 EATKVKIIRDAIRAEDKRLRSQY-FLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIVKDDPD-----FSKQVLVRYNSPVIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRAN 396
            E  K K I   IR  D R+R ++ FL R   QDT+G +I + +A    L +  + IGA+     I+ NA+  S LHE+EHDLIH+LY K N  +QN MF  +W+ ++N  NPW+RR  HL HH+ +G   DVEER+IG G+P+   + L +     A +L    + KD         + +++  Y           ++++  H L V   LV   I    F +     L    V+Y     +PN LRQ+S+ I+S+  HYYGDIP  +V+ QTQ+LN   ++PF +FCFNFGATH IHHFV  QPFYLRQ TAF   P M   G R ND  + FR+N
Sbjct:   17 EKEKTKRIIQWIRFWDNRIRFKFPFLTRH--QDTIGLSITIGSASGMILFASLYLIGAIPFWVCIVSNAILASFLHEIEHDLIHNLYHKGNAKIQNFMFWVVWLFRANTVNPWFRREIHLLHHKLSGNKEDVEERMIGNGMPFGLRRILTMIDGNFALVLQGRKVAKDAYSQLRKIKAPRIIGPYREIFFLSWYSFLLLNAFHILNV---LVGTPISEPEFLQTFRSILNAAAVVY----LIPNWLRQTSIQIVSSNMHYYGDIP--NVYNQTQVLNSWFVFPFHLFCFNFGATHGIHHFVVNQPFYLRQWTAFYALPAMKRYGIRFNDFASMFRSN 342          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_100759858.1 (fatty acid desaturase [Leptospira sp. FH2-C-A2] >PJZ64707.1 fatty acid desaturase [Leptospira sp. FH2-C-A2])

HSP 1 Score: 212.6 bits (540), Expect = 2.300e-51
Identity = 134/354 (37.85%), Postives = 194/354 (54.80%), Query Frame = 0
Query:   48 ATATGTMPRTTSISHLSQEATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLI-ADDIVKDDPDFSKQVLVRYNSP-VIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWG 399
            A A  T    T + +   +  K K I   IR  DK+LR ++  LR   QDT+G  I L +A    L    +  G +     I+ N +  S+LHE+EHDLIH+LY+K N  +QN MF  +W+ + N  +PW+RR  H  HH+ +G   D+EERLIG G+ +  FKRLL       + L  A  + K+ P F +  +VR + P ++ +  +       +   +G  L+ + +    + + +  +L    V+Y     +PN +RQ+S+ I+S+  HYYGD+    +  QTQ+LN   L+P  +FCFNFG+TH IHHFV  QPFYLRQ  A  V P M   G R ND G+ FRANR G
Sbjct:    3 AVAEKTPMVPTKLYNKLSDREKSKRIMKWIRFRDKKLRKKFGFLRH--QDTIGLGITLGSAAGMVLFGSLYIAGLIPAWVCIVANGVLASILHEVEHDLIHNLYYKDNLKLQNFMFWTVWIFRGNTVSPWYRRMIHTLHHKVSGHKEDIEERLIGNGMNF-GFKRLLTMMDGNMSFLFQAHKLRKEAPKFDRGEIVRSSWPYLVIYYHLWYNFLFLNAFYIGNELLGSPVEIPSWLDTIRNFLNIAAVVY----TIPNWIRQTSIQIVSSNMHYYGDV--GGIHDQTQVLNRWFLFPLHLFCFNFGSTHGIHHFVVNQPFYLRQAVAPFVRPAMKRYGIRFNDFGSIFRANRIG 347          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_010573423.1 (fatty acid desaturase [Leptospira kmetyi] >EQA53593.1 stearoyl-CoA 9-desaturase [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9])

HSP 1 Score: 211.8 bits (538), Expect = 3.900e-51
Identity = 135/337 (40.06%), Postives = 188/337 (55.79%), Query Frame = 0
Query:   66 EATKVKIIRDAIRAEDKRLRSQY-FLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIVKDDPD-----FSKQVLVRYNSPVIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRAN 396
            E  K K I   IR  D R+R ++ FL R   QDT+G +I + +A    L +  + IGA+     I+ NA+  S LHE+EHDLIH+LY K N  +QN +F  +W+ ++N  NPW+RR  HL HH+ +G   DVEER+IG G+P+   + L +     A +L    + KD         + +++  Y           ++++  H L V   LV   I    F +     L    V+Y     +PN LRQ+S+ I+S+  HYYGDIP  +V+ QTQ+LN   ++PF +FCFNFGATH IHHFV  QPFYLRQ TAF   P M   G R ND  + FR+N
Sbjct:   17 EKEKTKRIIQWIRFWDNRIRFRFPFLTRH--QDTIGLSITIGSASGMILFASLYLIGAIPFWVCIVSNAILASFLHEIEHDLIHNLYHKGNAKIQNFIFWVVWLFRANTVNPWFRREIHLLHHKLSGNKEDVEERMIGNGMPFGLRRILTMIDGNFALVLQGRKVAKDAYSQLRKIKAPRIIGPYREIFFLSWYSFLLLNAFHILNV---LVGTPISEPEFLQTFRSILNAAAVVY----LIPNWLRQTSIQIVSSNMHYYGDIP--NVYNQTQVLNSWFVFPFHLFCFNFGATHGIHHFVVNQPFYLRQWTAFYALPAMKRYGIRFNDFASMFRSN 342          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_061323410.1 (fatty acid desaturase [Serratia rubidaea] >AML58225.1 Fatty acid desaturase [Serratia rubidaea])

HSP 1 Score: 211.8 bits (538), Expect = 3.900e-51
Identity = 134/345 (38.84%), Postives = 194/345 (56.23%), Query Frame = 0
Query:   69 KVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIK-SNANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIV----KDDPDFSKQVLVRYNSPVIAFSTVAM-------VIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWGRKG 402
            +VK IR  I A    ++ ++ +L+  +Q+ +G  I L A  +  ++S  +    +     +I NAL +SL HE+EHDLIH LYFKKN+ + + M A +W+++ S+ANPW R+  HL+HHQY+G  +D+EER +  G  W    RLL+T    A L++A  +V    KD  D    V+    + + AF  VAM       +  L H + V   L+   I      +AL+  L   +V+       PN+L    L  +S+  HY+GD+   ++  QTQ++N   LWP Q+FCFNFG+TH IHHFV  +PFY+RQLTA     VM E G R ND G+  RANRW R G
Sbjct:   13 RVKYIRKNIIAAGSDVKQRFPILK--YQNAIGLGILLFALFSMVVVSALYLNQQIPWWLCLILNALCLSLAHEIEHDLIHSLYFKKNRFMYHLMMALVWIVRPSSANPWARKTLHLKHHQYSGSELDIEERALSNGTRWGVL-RLLMT----ADLMVAMAVVAWQDKDKGDRLGMVM----TGIKAFFPVAMLTWGLWYLFLLVHGVDVAAALLGMPIAWSASAQALIGDLDMLVVVLIG----PNILWSFCLHFVSSNMHYHGDVEHNNLLQQTQVMNPWWLWPLQLFCFNFGSTHSIHHFVVNEPFYIRQLTAATAHRVMKEMGVRFNDYGSFGRANRWKRTG 342          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_100755376.1 (fatty acid desaturase [Leptospira sp. JW2-C-B1] >PJZ30187.1 fatty acid desaturase [Leptospira sp. JW2-C-B1])

HSP 1 Score: 211.5 bits (537), Expect = 5.200e-51
Identity = 135/337 (40.06%), Postives = 187/337 (55.49%), Query Frame = 0
Query:   66 EATKVKIIRDAIRAEDKRLRSQY-FLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIVKDDPD-----FSKQVLVRYNSPVIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRAN 396
            E  K K I   IR  D R+R ++ FL R   QDT+G +I + +A    L +  + IG +     I+ NA+  S LHE+EHDLIH+LY K N  +QN MF  +W+ ++N  NPW+RR  HL HH+ +G   DVEER+IG G+P+   + L +     A +L    + KD         + +++  Y           ++++  H L V   LV   I    F +     L    V+Y     +PN LRQ+S+ I+S+  HYYGDIP  +V+ QTQ+LN   ++PF +FCFNFGATH IHHFV  QPFYLRQ TAF   P M   G R ND  + FR+N
Sbjct:   17 EKEKTKRIIQWIRFWDNRIRFKFPFLTRH--QDTIGLSITIGSASGMILFASLYLIGEIPFWVCIVSNAILASFLHEIEHDLIHNLYHKGNAKIQNFMFWVVWLFRANTVNPWFRREIHLLHHKLSGNKEDVEERMIGNGMPFGLRRILTMIDGNFALVLQGRKVAKDAYSQLRKIKAPRIIGPYREIFFLSWYSFLLLNAFHILNV---LVGTPISEPEFLQTFRSILNAAAVVY----LIPNWLRQTSIQIVSSNMHYYGDIP--NVYNQTQVLNSWFVFPFHLFCFNFGATHGIHHFVVNQPFYLRQWTAFYALPAMKRYGIRFNDFASMFRSN 342          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_016545060.1 (stearoyl-CoA 9-desaturase [Leptospira wolffii] >EPG67355.1 stearoyl-CoA 9-desaturase [Leptospira wolffii serovar Khorat str. Khorat-H2])

HSP 1 Score: 210.7 bits (535), Expect = 8.800e-51
Identity = 133/354 (37.57%), Postives = 193/354 (54.52%), Query Frame = 0
Query:   48 ATATGTMPRTTSISHLSQEATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLI-ADDIVKDDPDFSKQVLVRYNSP-VIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWG 399
            A A  T    T + +   +  K K I   IR  DK+LR ++  LR   QD +G  I L +A    L    +  G +     I+ N +  S+LHE+EHDLIH+LY+K N  +QN MF  +W+ + N  +PW+RR  H  HH+ +G   D+EERLIG G+ +  FKRLL       + L  A  + K+ P F +  +VR + P ++ +  +       +   +G  L+   +    + + +  +L    V+Y     +PN +RQ+S+ I+S+  HYYGD+  + +  QTQ+LN   L+P  +FCFNFG+TH IHHFV  QPFYLRQ  A  V P M   G R ND G+ FRANR G
Sbjct:    3 AVAEKTPMVPTKLYNKLSDREKSKRIMKWIRFRDKKLRKKFGFLRH--QDAIGLGITLGSAAGMILFGSLYIAGLIPAWVCIVANGVLASILHEVEHDLIHNLYYKDNLKLQNFMFWTVWIFRGNTVSPWYRRMIHTLHHKVSGHKEDIEERLIGNGMNF-GFKRLLTMMDGNMSFLFQAHKLRKEAPKFDRGEIVRSSWPYLVIYYHLWYNFLFLNAFYIGNELLGKPVEIPAWLDTIRNFLNIAAVVY----TIPNWIRQTSIQIVSSNMHYYGDV--KGIHDQTQVLNRWFLFPLHLFCFNFGSTHGIHHFVVNQPFYLRQAVAPFVHPAMKRYGIRFNDFGSIFRANRIG 347          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: WP_054306223.1 (fatty acid desaturase [Serratia rubidaea])

HSP 1 Score: 210.7 bits (535), Expect = 8.800e-51
Identity = 133/345 (38.55%), Postives = 194/345 (56.23%), Query Frame = 0
Query:   69 KVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIK-SNANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIV----KDDPDFSKQVLVRYNSPVIAFSTVAM-------VIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWGRKG 402
            +VK IR  I A    ++ ++ +L+  +Q+ +G  I L A  +  ++S  +    +     +I NAL +SL HE+EHDLIH LYFKKN+ + + M A +W+++ S+ANPW R+  HL+HHQY+G  +D+EER +  G  W    RLL+T    A L++A  +V    KD  D    V+    + + AF  VAM       +  L H + V   L+   I      +AL+  L   +V+       PN+L    L  +S+  HY+GD+   ++  QTQ++N   LWP Q+FCFNFG+TH IHHFV  +PFY+RQLTA +   VM E G R ND G+  RANRW   G
Sbjct:   13 RVKYIRKNIIAAGSDVKQRFPVLK--YQNAIGLGILLFALFSMVVVSALYLNQQIPWWLCLILNALCLSLAHEIEHDLIHSLYFKKNRFMYHLMMALVWIVRPSSANPWARKTLHLKHHQYSGSELDIEERALSNGTRWGVL-RLLMT----ADLMVAMAVVAWQDKDKGDRLGMVM----TGIKAFFPVAMLTWGLWYLFLLVHGVDVAAALLGMPIAWSAGAQALIGDLDMLVVVLIG----PNILWSFCLHFVSSNMHYHGDVEHNNLLQQTQVMNPWWLWPLQLFCFNFGSTHSIHHFVVNEPFYIRQLTAAKAHRVMREMGVRFNDYGSFSRANRWKSSG 342          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: GBF46272.1 (stearoyl-CoA 9-desaturase [Leptospira sp. E30])

HSP 1 Score: 210.7 bits (535), Expect = 8.800e-51
Identity = 129/334 (38.62%), Postives = 190/334 (56.89%), Query Frame = 0
Query:   66 EATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIVKDDPDFSKQVLVRYNSPVIAFSTVAMVIHLCHC-LGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNL-PNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANR 397
            E  K K I   IR  D +LR ++  LR   Q+ +G  I + +A    LL   +  G L     IIGNA+  S LHEMEHDLIH++YFK+N  +QN +F  +W+ ++N  NPW+R+  HL HH+ +G   D+EER I  G+PW  +KR+LV   P   +++    +K D   + + L +  SP       ++ + L +  LG G   +    L   FHE  +   +  ++   + V L P  LRQS++ I+S+  HYYGD+  + ++ QTQ+L+  L +P Q+FCFNFGATH IHHF+  QPFYLRQ  A +V P++ + G   ND  +   ANR
Sbjct:   15 EKEKTKRIMKWIRYSDSKLRKRFTFLRH--QNAIGFGIVIGSASGMILLGSLYIAGLLPFWICIIGNAIFASFLHEMEHDLIHNIYFKENPKIQNFLFWVVWLFRANVVNPWFRKEIHLLHHKVSGNKEDIEERFISNGMPW-GWKRILVMIDPILAVVLQGPKIKKD---AIRYLRKIKSPATKGPYQSVFLLLWYTFLGWGLFSLVNIALANPFHETGIIANIHSILNTTAVVYLIPCWLRQSAIQIVSSNMHYYGDV--KSLYRQTQVLDSWLTFPLQLFCFNFGATHGIHHFIVTQPFYLRQAVAPKVKPILKKYGIPFNDFKSMAHANR 340          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: GBF37338.1 (stearoyl-CoA 9-desaturase [Leptospira sp. E8])

HSP 1 Score: 209.5 bits (532), Expect = 2.000e-50
Identity = 130/347 (37.46%), Postives = 194/347 (55.91%), Query Frame = 0
Query:   57 TTSISHLSQEATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIKSN-ANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVTFTPAATLLIADDIV-KDDPDFSKQVLVRYNSP-VIAFSTVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWGRK 401
            T     LSQ+    KI++  IR  DK+LRS++  L+   QD +G AI L +A    L +  +  G +     II N +  S+LHE+EHDLIH+LY+K N  +QN MF  +W+ + N  +PW+RR  H  HH+ +G   D+EERLIG G+ +   KR +       + L    I+ ++ P F +  + R + P ++ +  +       +   +G  L+   I    + + +  +L    V+Y     +PN +RQ+S+ I+S+  HYYGD+  + +  QTQ+LN   L+P  +FCFNFG+TH IHHFV  QPFYLRQ  A  V P M   G R ND G+ FRANR G++
Sbjct:   14 TKLYERLSQKEKSKKIMK-WIRFRDKKLRSKFEFLKH--QDELGLAITLGSAAGMILFAGLYIAGIIPAWTCIIANGVLASILHEVEHDLIHNLYYKDNLKIQNFMFWMVWIFRGNTVSPWYRRMIHTLHHKVSGHKEDIEERLIGNGMKF-GLKRFITMMDGNMSFLFQSHILRREAPKFKRSEITRSSWPYLVVYFHLWYNFLFINLFYIGNELLGKPIEIPAWLDTVRHFLNISAVVY----TIPNWIRQTSIQIVSSNMHYYGDV--KGLHDQTQVLNSWFLFPLHLFCFNFGSTHGIHHFVVNQPFYLRQAVAPFVHPAMKRYGIRFNDFGSIFRANRLGKE 350          
BLAST of NO02G05420 vs. NCBI_GenBank
Match: CFV32607.1 (Fatty acid desaturase [Yersinia pseudotuberculosis] >CNL49566.1 Fatty acid desaturase [Yersinia pseudotuberculosis])

HSP 1 Score: 209.1 bits (531), Expect = 2.600e-50
Identity = 124/344 (36.05%), Postives = 190/344 (55.23%), Query Frame = 0
Query:   60 ISHLSQEATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVGAAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDLYFKKNKAVQNAMFAFIWVIK-SNANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWNSFKRLLVT-FTPAATLLIADDIVKDDPDFSKQVLVRYNSPVIAFSTV-AMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNLPNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFGATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWGRK 401
            + +++ ++ + K IR AI    K +R  Y +L+  +QD +G  I +T        S  +    +     II N L IS+ HE+EHDLIH+LYFKKN+ + N M   +W+++ S+ANPW RR  HL HHQ +G   D+EERL+  G+ W  F+  + + F  A   LIA    K  P+    +  +       FS + ++++++     +  ++ A    P+ + E  L  ++ F+      + +PN++    L  IS+  HYYGD    ++  +TQ+LN   LWPF +FCFNFG+TH IHHFV  +PFY+RQL+      +M E G R ND G+  RANRWG K
Sbjct:    5 VKNINSDSERSKKIRKAIVNYGKEIRLNYPILK--YQDALGLGILITVVAIMFFSSLFYINDYIPWWVCIIVNTLCISVAHEIEHDLIHNLYFKKNRIIHNLMMMIVWIVRPSSANPWVRRKIHLNHHQVSGTYDDLEERLLANGMRWGLFRLWMTSDFIVAVVALIAQG--KSLPE-RWSLFKKAFKAFFPFSFLHSIIVYVFIVFNLTNVIGAWVKSPIYWSEMTLN-IMNFISFAMVIIMVPNIIWTFCLHFISSSMHYYGDNESGNIVQETQVLNPWWLWPFHLFCFNFGSTHSIHHFVVNEPFYIRQLSVPVAHKIMKEMGVRFNDFGSFRRANRWGNK 342          
The following BLAST results are available for this feature:
BLAST of NO02G05420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_100737683.11.400e-5140.36fatty acid desaturase [Leptospira sp. JW3-C-A1] >P... [more]
WP_100759858.12.300e-5137.85fatty acid desaturase [Leptospira sp. FH2-C-A2] >P... [more]
WP_010573423.13.900e-5140.06fatty acid desaturase [Leptospira kmetyi] >EQA5359... [more]
WP_061323410.13.900e-5138.84fatty acid desaturase [Serratia rubidaea] >AML5822... [more]
WP_100755376.15.200e-5140.06fatty acid desaturase [Leptospira sp. JW2-C-B1] >P... [more]
WP_016545060.18.800e-5137.57stearoyl-CoA 9-desaturase [Leptospira wolffii] >EP... [more]
WP_054306223.18.800e-5138.55fatty acid desaturase [Serratia rubidaea][more]
GBF46272.18.800e-5138.62stearoyl-CoA 9-desaturase [Leptospira sp. E30][more]
GBF37338.12.000e-5037.46stearoyl-CoA 9-desaturase [Leptospira sp. E8][more]
CFV32607.12.600e-5036.05Fatty acid desaturase [Yersinia pseudotuberculosis... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007210NSK007210Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05420.1NO02G05420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575446gene_1131Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100115g11gene505Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05420.1NO02G05420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05420 ID=NO02G05420|Name=NO02G05420|organism=Nannochloropsis oceanica|type=gene|length=3314bp
ATGGCGGTCCAATAAAAAATTACACAATGCCCTTGTGTTGCTTCTACAGT
AATAGCGTCCATGAATAACTGCAGGGCAGGGTCAGTGGTATATGGTGGAC
GAAGTGGCTCTTAATCAGAGATGGAATGCCGGGTCAGGTTATGATGTCCG
GAGGTGCTTTCTGATGGGGTGTGGAGGCAGGGGGGGACAGAAGAGTTCAT
ATTCCCCACGTTTCTTTGCTTTGCATGCTCGGAACTTTCTTTATATTTAA
ACAAGATGCACAGATGATTTCGAGCTGTCAATGGCGTCTCGGAAAATGTG
CACAGCGGTCACTCACGGATGTGCTAAGAGGATCATATGGGCCGGTCGGT
CCCAGAGGAAAGTCTCTCGAGCGCGACGAACGCTCGAGCTAAGAGATCCA
CATCAGCCAATGCGCTCAAATAGCGTGGGATTCATGGTACTTGGTCCCGC
GAGCATCTTTGTGCATGTTTGGCACGATATTGGGTGTGGTTGATGTGCGT
TTCAAGCGAGCTTGAGCCCCTTCGTCTCTGCCCATGTCTGTTGCCTCGTC
ACCTCCTCGACGAAAGCAGAGAGCAAATGCTGCGTCACCCCCAGGTGTAT
TGCCGGCCCCCCTTCCTCTTTCTTTTTTACAAGCGCCCGCGCTCCTTCCT
GCTTCTTGATGTTGGTACCTGGCATTATTGCGTGCACTTTCGATGTGTCT
CTCCTTTTATCATCATTCTCTCTTCCGGCATTCACGCACACAATATGACA
GCCTCGTCACATCGCGATCGCCCAAGGAGTCCGCCGACCGTCGCGGTGCC
AGCAGCAAGAACACTGCGCAGATCCGTCACCACGTGCATAGACTACAGCT
AAGAAACCACCATCACCATGCCGCCTCAAAATGTGCACATGCTCAGCCGG
GACACCCTTCCGTCCTCAAGCTCCCTCGTCGgtacgtgtgacaatttctt
atctaccgctgccttccagagctcgtgcgaagaaaacctgcgtcgcatgc
cgcaaccagagtttgtcgggcatcgtgtcctatgccttgatcccggcagg
gatataacccctttgtcattcctgtgtccctgtgtgacccatccttcgcc
cggctgtgcttgtaccacctggcttcattctcttgtgtcccgttctttcg
atgttccacctcacgcttgtgtccctcccacttcccccctcctgacagAT
GAAGACGGCTCCCCCCGCTACCCCGGCACGTCTACCCATGGGGGTGCTTC
CTCCTTCTCCTCCCCCTCCACCACGGCAACTGCCACTGGCACAATGCCGC
GCACCACCTCCATCTCCCACCTCAGCCAAGAGGCCACCAAGGTCAAAATC
ATCCGCGACGCCATCCGGGCGGAAGACAAGCGGCTGCGCTCCCAATATTT
CCTCCTGCGTGAGGAGTGGCAAGACACAGTCGGTGCGGCTATCTTCCTGA
CGGCCGCCTGTACATGGGCCTTGCTCTCCTACGCGTGGTACATCGGCGCC
CTTTCCACCCCTTTCCTCATCATAGGCAATGCCCTGGCCATCTCGCTGTT
GCATGAGATGGAGCACGACTTAATCCACGACTTGTATTTCAAGAAGAACA
AGGCCGTTCAAAATGCCATGTTCGCATTTATCTGGGTGATCAAGAGgtac
gtcttcacgactattcttcctccctctctccaatccacctcgctgctgct
ggtccctcccttgcgcgtgccagtggctgcacgtgatggaagacatattg
aatccctcttctccctccatctcatcttcactccatgacaagagaaacgg
tgatagtcatcgcgccagcagtttcactggaccctcccccttctccctcc
ctccccctcttctctctctcccccctccctccctccctcactacccgtcc
tccagCAACGCCAACCCCTGGTGGCGGCGCTACTACCACTTGCGACATCA
TCAGTATGCCGGGCAGGTGGTTGACGTGGAGGAACGTTTAATCGGACTGG
GCTTGCCCTGGAACTCGTTTAAACGGCTCTTGGTGACGTTCACACCCGCC
GCGACCCTCCTGATCGCCGATGACATTGTGAAAGACGACCCGGACTTCAG
CAAACAGGTTCTCGTCCGGTACAACTCGCCTGTTATCGCCTTTTCGACTG
TGGCGATGGTAATCCACCTGTGCCACTGCCTCGGGGTAGGGGAGCTTCTG
GTAGCGGCCGGCATCCTCCCCGTGGGGTTTCACGAGGCTTTGCTTCGCTA
CCTCCTTCCCTTCCTCGTGCTGTATAATTCAACGGTGAATCTCCCGAATG
TGTTGAGGCAGAGTAGCCTGGTGATCATATCGACGTACTGCCACTATTAC
GGGGACATCCCTGAGCGAGACGTTTTTTTCCAAACGCAGATTTTGAACCA
TCCGTTGTTGTGGCCGTTCCAGATGTTTTGTTTTAATTTTGGAGCTACGC
ACATCATCCACCATTTTGTGACGCGGCAGCCGTTTTATCTGCGGCAGCTG
ACGGCGTTTCGGGTGACACCGGTGATGCTTGAGCAAGGATGTCGTCACAA
CGACCTTGGGAATCATTTCAGGGCAAATCGATGGGGTAGGAAGGGGGAGG
AGCCCTCGGTGATGATGCCGGTTGGGGAGGAGAAGAAGGTGCTTTGAGGT
AAAATCGGAGGAATCGGAGAGGGGGAGTGAGAGGAAAAAGGAAAAAGGTT
TTCGCGTAAGATGATTTTTTCTGTCCCCCAAAAAAAGCATGATTGAGTTG
GTGAAGCGGGAAGGAAACAGAAGGAAAGTAATTGTCCCAATTTTTCATTG
ACGATGTTTCTCTGTGACGGGTGTCCAGTATCTCGTTTGTGGTTTCGCTT
CTGGTGGTGGTGTGGTGTGGTGTGGTGGAGGGAGAAACAAAACATGCGTG
TGTGGACTGTATCATAGTAGTAGTATATATATACCCTCTCTCTAGGTTGA
CACTTCGCTGTAAAACGTCAACCAACGCGCACCGTGCGGGATCTGTGGTT
GAGGATGTGGGCAGTTGACGACGGTGGGTGGGTGGAGGACTGACATGGGA
GATGAAGAGAAAAACGAAGTAGAGGAGGAGGATTAAGATTGAGAAGAATA
GCGACAAAATCAACATCTAGGATTGGTTAGAAGTTCAAACGAGGAGGAAG
AAGGCAGGGAAGAGGGTTGGGCCATGCTGAGAGGGGGAAGGGCCGCAACC
TAGAGGTGCAAGGCCCTAGAAGACATGGAGCACTGTTAAAACAAGATCAA
GAAAAATAAGGATTAGTTGAAGAGCAAGCAGGAAACCATCATGAGGAAAC
AACGAATGCGTTTT
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protein sequence of NO02G05420.1

>NO02G05420.1-protein ID=NO02G05420.1-protein|Name=NO02G05420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MPPQNVHMLSRDTLPSSSSLVDEDGSPRYPGTSTHGGASSFSSPSTTATA
TGTMPRTTSISHLSQEATKVKIIRDAIRAEDKRLRSQYFLLREEWQDTVG
AAIFLTAACTWALLSYAWYIGALSTPFLIIGNALAISLLHEMEHDLIHDL
YFKKNKAVQNAMFAFIWVIKSNANPWWRRYYHLRHHQYAGQVVDVEERLI
GLGLPWNSFKRLLVTFTPAATLLIADDIVKDDPDFSKQVLVRYNSPVIAF
STVAMVIHLCHCLGVGELLVAAGILPVGFHEALLRYLLPFLVLYNSTVNL
PNVLRQSSLVIISTYCHYYGDIPERDVFFQTQILNHPLLWPFQMFCFNFG
ATHIIHHFVTRQPFYLRQLTAFRVTPVMLEQGCRHNDLGNHFRANRWGRK
GEEPSVMMPVGEEKKVL*
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Synonyms
Publications