NO02G04660, NO02G04660 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G04660
Unique Name	NO02G04660
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5449
Alignment location	chr2:1255516..1260964 +

Link to JBrowse

Properties


Property Name	Value
Description	Choline/ethanolamine kinase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1255516..1260964 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity

Homology

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BLAST of NO02G04660 vs. NCBI_GenBank
Match: XP_005853857.1 (choline/ethanolamine kinase [Nannochloropsis gaditana CCMP526] >EKU22504.1 choline/ethanolamine kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 371.3 bits (952), Expect = 3.500e-99
Identity = 201/367 (54.77%), Postives = 250/367 (68.12%), Query Frame = 0

Query:    7 TPASVTALLQRLELLGAETDTAAVSLTPISGGNTNRIYRV--TCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCGVKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVR------GGMADKSEEK-----ANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLSTIDFDFVGFARQRLDEYYKGMGR 361
            TPA V A+L+ + LL  E++   +S+  ISGGNTNR+YRV  T     GG RD LLR FG G++ FIDR QE  I+ AVS++GLCPKLLATF EGR+EEFVP  +PL+A QFRS A SAL+ARQL A HSI+ V  L +P IPPL AQLR WAT+A ++CG  + G+DVA L  EVDRLEARLLAV+SPVCLCHND+NHLN+LLR         G ++ +E +     +N G  +          D IVF+DLEYAGWNYRGFDLGNL+CEWASDFQS HP  LDF+ H                       E +E LV EM EF+LASHL+WG+WGL+Q+K+ST +F+ V +A+QRL  Y++GM R
Sbjct:    6 TPAMVAAILRDVGLLNVESE-ENISVCAISGGNTNRVYRVSHTGATARGGTRDFLLRLFGYGTEVFIDRQQEALIYRAVSSQGLCPKLLATFSEGRIEEFVP-GQPLSAKQFRSGAFSALIARQLRAFHSIADVKGLPKPTIPPLIAQLRAWATKARSVCGSAWGGIDVASLEGEVDRLEARLLAVSSPVCLCHNDVNHLNILLRPTKLETPGQGTSEGTESEIAGCHSNAGCAATTPALGPVAGDDIVFIDLEYAGWNYRGFDLGNLLCEWASDFQSPHPCELDFSSH--YPTTEEQKHIARAYLGSGAQGEAIEALVIEMNEFALASHLLWGMWGLIQSKMSTSEFESVSYAQQRLAAYFEGMRR 368

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: EWM30199.1 (choline ethanolamine kinase [Nannochloropsis gaditana])

HSP 1 Score: 369.4 bits (947), Expect = 1.300e-98
Identity = 200/367 (54.50%), Postives = 248/367 (67.57%), Query Frame = 0

Query:    7 TPASVTALLQRLELLGAETDTAAVSLTPISGGNTNRIYRV--TCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCGVKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVR------GGMADKSEEK-----ANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLSTIDFDFVGFARQRLDEYYKGMGR 361
            TPA V A+L+   LL  E +   +S+  ISGGNTNR+YRV  T     GG RD LLR FG G++ FIDR QE  I+ AVS++GLCPKLLATF EGR+EEFVP  +PL+A QFRS A SAL+ARQL A HSI+ V  L +P IPPL AQLR WAT+A ++CG  + G+DVA L  EVDRLEARLLA++SPVCLCHND+NHLN+LLR         G ++ +E +     +N G  +          D IVF+DLEYAGWNYRGFDLGNL+CEWASDFQS HP  LDF+ H                       E +E LV EM EF+LASHL+WG+WGL+Q+K+ST +F+ V +A+QRL  Y++GM R
Sbjct:    6 TPAMVAAILRDAGLLNVE-NVEDISVCAISGGNTNRVYRVSHTGATARGGTRDFLLRLFGYGTEVFIDRQQEALIYRAVSSQGLCPKLLATFSEGRIEEFVP-GQPLSAKQFRSGAFSALIARQLRAFHSIADVKGLPKPTIPPLIAQLRAWATKARSVCGSAWGGIDVASLEGEVDRLEARLLAISSPVCLCHNDVNHLNILLRPTKLETPGQGTSEGTESEIAGCHSNAGCAATTPALGPVAGDDIVFIDLEYAGWNYRGFDLGNLLCEWASDFQSPHPCELDFSSH--YPTTEEQKHIARAYLGSGAQGEAIEALVIEMNEFALASHLLWGMWGLIQSKMSTSEFESVSYAQQRLAAYFEGMRR 368

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: CDM81769.1 (unnamed protein product [Triticum aestivum])

HSP 1 Score: 194.1 bits (492), Expect = 7.700e-46
Identity = 116/352 (32.95%), Postives = 176/352 (50.00%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCGV-KYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYY 356
            PA    +L RL  EL GA+ D AA+ +  + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  FP+GRVEEF+ +A  L+A   R P +S L+AR+L   H +     +  P+   L+ +LR W   A + C   +   L +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ S  PH++DFT +                        +VE L+  + ++SL SHL WG+WG++ A ++  IDF++  +AR RLD+Y+
Sbjct:   21 PAEARRILHRLAGELWGADVDPAALVVYQLQGALTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRADEVRTFECMSRHGQGPRLLGRFPQGRVEEFI-NARTLSAPDLRDPEISGLIARKLREFHELD----MPGPKDISLWQRLRRWLEEARSRCSTEEARELRLETLGDEIAELENVLSGVDQRVVFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHSDTPHVMDFTKYPDVDEQRRFLEAYLSSSGENPSDVEVETLLGLIAKYSLTSHLFWGLWGIVSAHVNKNIDFEYKEYARHRLDQYW 341

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: XP_017228688.1 (PREDICTED: probable choline kinase 2 [Daucus carota subsp. sativus] >KZM80245.1 hypothetical protein DCAR_032125 [Daucus carota subsp. sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.000e-45
Identity = 109/325 (33.54%), Postives = 173/325 (53.23%), Query Frame = 0

Query:   35 ISGGNTNRIYRVTC-HLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG---VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLSTIDFDFVGFARQRLDEYY 356
            +SG  TN +YR+T     +  +R++LLR +G+G D F DR +E + F  +S  G  P+LL  FPEGRVEEF+  A+ L+AS  R P  SAL+A +L   H+++    +   +   L+ ++R+W T+A  LC     K   LD   L  E+D +E  L      V  CHNDL + N+++                          D++  SI  +D EYA +N   +DL N  CE A+D+ S  PH+LD+  +                        +V+ LV ++++++LA+HL WG+WG++ A ++TIDFD++ +ARQR ++Y+
Sbjct:   42 LSGAMTNEVYRITWPTTTDDVERNVLLRIYGEGVDVFFDRDEEIQTFDCMSKHGHGPRLLGQFPEGRVEEFI-HAKTLSASDLRDPETSALIAAKLREFHTLN----MPGSKDVILWDRMRNWLTKARKLCSDECAKEFHLDT--LADEIDIVEKELSQSPQGVVFCHNDLQYGNIMI--------------------------DEKTRSITIIDYEYASYNPAAYDLANHFCEMAADYHSETPHILDYNVYPGLEERERFVLSYLSSTGNEPSETEVKKLVNDVEKYTLANHLFWGIWGIISAYVNTIDFDYIDYARQRFEQYW 333

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: XP_020191035.1 (probable choline kinase 2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 193.7 bits (491), Expect = 1.000e-45
Identity = 115/352 (32.67%), Postives = 176/352 (50.00%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCGV-KYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYY 356
            PA    +L RL  EL GA+ D AA+ ++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  FP+GRVEEF+ +A  L+A   R P +S L+AR+L   H +     +  P+   L+ +LR W   A + C   +   L +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ S  PH++DFT +                        +VE L+  + ++SL SHL WG+WG++ A ++  IDF++  +AR R D+Y+
Sbjct:   82 PAEARRILHRLAGELWGADVDPAALVVSQLKGALTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRADEVRTFECMSRHGQGPRLLGRFPQGRVEEFI-NARTLSAPDLRDPEISGLIARKLREFHELD----MPGPKDISLWQRLRRWLEEARSRCSTEEARELRLETLGDEIAELENVLSGVDQRVVFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHSDTPHVMDFTKYPDVDEQRRFLEAYLSSSGENTSDVEVETLLGLIAKYSLTSHLFWGLWGIVSAHVNKNIDFEYKEYARHRFDQYW 402

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: PAN32608.1 (hypothetical protein PAHAL_E04229 [Panicum hallii])

HSP 1 Score: 191.0 bits (484), Expect = 6.500e-45
Identity = 112/360 (31.11%), Postives = 181/360 (50.28%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG-VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYYKGMGRSKG 364
            P     +L RL  EL G + D  A++++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  F  GRVEEF+ +A  L+ +  R P +SAL+A++L   H +     +  P+   L+ +LR W  +A   C   + +   +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ ++ PH+LDF  +                       E+VENL+  + +++LASH+ WG+WG++ A ++  IDF+++ +ARQR D+Y++   R  G
Sbjct:   78 PEDARRILLRLAGELWGGDVDPGALAVSQLKGAMTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRADEVRTFECMSRHGQGPRLLGRFANGRVEEFI-NARTLSTADLRDPEISALIAKKLREFHDLD----MPGPKDVSLWQRLRRWLEQARVRCSEEESKQFQLNKLGDEIALLEKALSGVIQSVGFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHTSTPHVLDFAKYPDIEEQRRFVQTYLSSSGETPSDEEVENLLGLIAKYTLASHIFWGLWGIISAHVNKNIDFEYMEYARQRFDQYWQTKPRILG 406

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: PAN32607.1 (hypothetical protein PAHAL_E04229 [Panicum hallii])

HSP 1 Score: 191.0 bits (484), Expect = 6.500e-45
Identity = 112/360 (31.11%), Postives = 181/360 (50.28%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG-VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYYKGMGRSKG 364
            P     +L RL  EL G + D  A++++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  F  GRVEEF+ +A  L+ +  R P +SAL+A++L   H +     +  P+   L+ +LR W  +A   C   + +   +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ ++ PH+LDF  +                       E+VENL+  + +++LASH+ WG+WG++ A ++  IDF+++ +ARQR D+Y++   R  G
Sbjct:   29 PEDARRILLRLAGELWGGDVDPGALAVSQLKGAMTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRADEVRTFECMSRHGQGPRLLGRFANGRVEEFI-NARTLSTADLRDPEISALIAKKLREFHDLD----MPGPKDVSLWQRLRRWLEQARVRCSEEESKQFQLNKLGDEIALLEKALSGVIQSVGFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHTSTPHVLDFAKYPDIEEQRRFVQTYLSSSGETPSDEEVENLLGLIAKYTLASHIFWGLWGIISAHVNKNIDFEYMEYARQRFDQYWQTKPRILG 357

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: PUZ58371.1 (hypothetical protein GQ55_5G504500 [Panicum hallii var. hallii])

HSP 1 Score: 191.0 bits (484), Expect = 6.500e-45
Identity = 112/360 (31.11%), Postives = 181/360 (50.28%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG-VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYYKGMGRSKG 364
            P     +L RL  EL G + D  A++++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  F  GRVEEF+ +A  L+ +  R P +SAL+A++L   H +     +  P+   L+ +LR W  +A   C   + +   +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ ++ PH+LDF  +                       E+VENL+  + +++LASH+ WG+WG++ A ++  IDF+++ +ARQR D+Y++   R  G
Sbjct:   29 PEDARRILLRLAGELWGGDVDPGALAVSQLKGAMTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRTDEVRTFECMSRHGQGPRLLGRFANGRVEEFI-NARTLSTADLRDPEISALIAKKLREFHDLD----MPGPKDVSLWQRLRRWLEQARVRCSEEESKQFQLNKLGDEIALLEKALSGVIQSVGFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHTSTPHVLDFAKYPDIEEQRRFVQTYLSSSGETPSDEEVENLLGLIAKYTLASHIFWGLWGIISAHVNKNIDFEYMEYARQRFDQYWQTKPRILG 357

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: PUZ58369.1 (hypothetical protein GQ55_5G504500 [Panicum hallii var. hallii])

HSP 1 Score: 191.0 bits (484), Expect = 6.500e-45
Identity = 112/360 (31.11%), Postives = 181/360 (50.28%), Query Frame = 0

Query:    8 PASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG-VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKLS-TIDFDFVGFARQRLDEYYKGMGRSKG 364
            P     +L RL  EL G + D  A++++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  F  GRVEEF+ +A  L+ +  R P +SAL+A++L   H +     +  P+   L+ +LR W  +A   C   + +   +  L  E+  LE  L  V   V  CHNDL + N+++                           +E   +  +D EYA +N   FD+ N  CE A+D+ ++ PH+LDF  +                       E+VENL+  + +++LASH+ WG+WG++ A ++  IDF+++ +ARQR D+Y++   R  G
Sbjct:   78 PEDARRILLRLAGELWGGDVDPGALAVSQLKGAMTNEVFRITWPGGEGDPRKVLVRIYGQGVEVFFDRTDEVRTFECMSRHGQGPRLLGRFANGRVEEFI-NARTLSTADLRDPEISALIAKKLREFHDLD----MPGPKDVSLWQRLRRWLEQARVRCSEEESKQFQLNKLGDEIALLEKALSGVIQSVGFCHNDLQYGNIMIY--------------------------EETRQVTLIDYEYASFNPVAFDIANHFCEMAADYHTSTPHVLDFAKYPDIEEQRRFVQTYLSSSGETPSDEEVENLLGLIAKYTLASHIFWGLWGIISAHVNKNIDFEYMEYARQRFDQYWQTKPRILG 406

[Close]

BLAST of NO02G04660 vs. NCBI_GenBank
Match: EES02347.1 (hypothetical protein SORBI_3003G040700 [Sorghum bicolor])

HSP 1 Score: 189.5 bits (480), Expect = 1.900e-44
Identity = 113/359 (31.48%), Postives = 179/359 (49.86%), Query Frame = 0

Query:    2 TAAFHTPASVTALLQRL--ELLGAETDTAAVSLTPISGGNTNRIYRVTCHLPEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGRVEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLFAQLRDWATRAMTLCG-VKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHNDLNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAGWNYRGFDLGNLICEWASDFQSTHPHLLDFTHHXXXXXXXXXXXXXXXXXXXXXXXEDVENLVFEMQEFSLASHLMWGVWGLLQAKL-STIDFDFVGFARQRLDEYYK 357
            T+    P     +L RL  +L G++ D +A++++ + G  TN ++R+T    EG  R +L+R +G+G + F DR  E R F  +S  G  P+LL  F  GRVEEF+  A  L+A+  R P +SAL+A++L   H +     +  PR   L+ +LR W   A   C   ++    +  L  E+  LE  L  V   V  CHNDL + N+++                          D+E   +  +D EYA +N   FD+ N  CE A+D+ +  PH LDFT +                        +VE L+  + +++ ASHL WG+WG++ A + + IDF++  +ARQRLD+Y++
Sbjct:   24 TSIDRIPEDARRILHRLAGDLWGSDVDPSALTVSQLKGAMTNEVFRITWPGGEGDPRKVLVRIYGRGVEVFFDRADEVRTFECMSRHGQGPRLLGRFANGRVEEFI-YARTLSAADLRDPEISALIAKKLREFHDLD----MPGPRDVSLWQRLRRWLEEARGRCSEQEFNQFQLDKLGDEIAVLEKTLSGVEQSVGFCHNDLQYGNIMI--------------------------DEETRQVTLIDYEYASFNPIAFDIANHFCEMAADYHTATPHELDFTKYPGIEEQRRFVQTYLCSAGEKPSDGEVEKLLGLIAKYTPASHLFWGLWGIISAHVNNNIDFEYKEYARQRLDQYWQ 351

The following BLAST results are available for this feature:

BLAST of NO02G04660 vs. NCBI_GenBank

BLAST of NO02G04660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005853857.1	3.500e-99	54.77	choline/ethanolamine kinase [Nannochloropsis gadit...	[more]
EWM30199.1	1.300e-98	54.50	choline ethanolamine kinase [Nannochloropsis gadit...	[more]
CDM81769.1	7.700e-46	32.95	unnamed protein product [Triticum aestivum]	[more]
XP_017228688.1	1.000e-45	33.54	PREDICTED: probable choline kinase 2 [Daucus carot...	[more]
XP_020191035.1	1.000e-45	32.67	probable choline kinase 2 [Aegilops tauschii subsp...	[more]
PAN32608.1	6.500e-45	31.11	hypothetical protein PAHAL_E04229 [Panicum hallii]	[more]
PAN32607.1	6.500e-45	31.11	hypothetical protein PAHAL_E04229 [Panicum hallii]	[more]
PUZ58371.1	6.500e-45	31.11	hypothetical protein GQ55_5G504500 [Panicum hallii...	[more]
PUZ58369.1	6.500e-45	31.11	hypothetical protein GQ55_5G504500 [Panicum hallii...	[more]
EES02347.1	1.900e-44	31.48	hypothetical protein SORBI_3003G040700 [Sorghum bi...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G04660.1	NO02G04660.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|550442	gene_1061	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100090g21	gene456	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G04660.1	NO02G04660.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G04660 ID=NO02G04660|Name=NO02G04660|organism=Nannochloropsis oceanica|type=gene|length=5449bp
AACATGGCAATCCAGCCCTCCCGCGCGTGCAGGCAAACCCAAGCATGTTT
AAAGGGACGTCTTCAAGATCCAGAATGTGCCTGTGCTGTTTTATCTGTGA
GTCTGGAACATGACAATCTGGAAAATGACAAATATTTGCGTGCTGAGGAA
CTTGAAGGCTTTTCATGGCGCGTACCGAAGGCCAACTCCTTCACTGTATC
TTACACAGTGTTACACCCACAGTGCGGGAAGCTCAGGTCTTTTGCACTTG
AACAATCTCGAGGCTGGTGCGGTTCGGATACATTCATGTGTCCATATGTC
CATCCTCGTCTTATTATCCGACTCGACTTGGGCAGATCAGCGATATTTAT
TTCGTGAGGACTCGGAGTAATTTCAATGTCATTTCAATTATTTCTTTTGA
CATTTATTACTTTCATACGGGTTCAAATTTATCTAAAGTTGAATGCCGCT
AATTGCAAGGCATTTTTCTTCTTCCCCTGCTGCTTCTTCTTCTTTCCTCC
CGCGCCAGCAGCACCACTGGCGTATGGAGAATCCTCGTCTTCAGCAGCAT
CCCGGACAGCTTTGCCTACCCACCCACCCTTGCTCACGCTCACACGAGGA
GCAGCAGCGGCTGCGACTGCTGCACTGGTATTACCGTTGCTGCTCACTCT
TCCTAAGGAGGGAAAATTATCCTCCGTCTTAGTCACACTAGAAGGACGTT
CCAACCCTGGTGGTGGGCCTCTCGGTAGTGAGGTTGACACGGAGGGTAAG
TGCGAAAATGCACTGCTACTAACGTTTGACCCACCTCCTCCTCCTCCTCC
TCTGCCAGCACCACCCAATCGAGAAGCCATCGACGATAATGATCCCGTCG
AGAGAGGCGGTCCTGGTGGCAAAAAGACATTTGCCTCTCGCTGACCATTC
TCACTTCCTCCTCTTTCATTGTCATCATTCTTAAATCGTACAATTGTAAT
CCCTGCGGGCTTGCGTCCATGCGGTACACGTGTCAATCCTCCACTGCCCC
CTCCCGCCGCCGCCAGGGCCTTAGCCCATGCACTCGACCGCCCACCTCCC
GCCTGCTGCTGCTGCTTCTTTTTTGGCTTGGTAGCAGTCACCTTGCTGCA
GCTGCCGCTGCTGCTCCTACTACTCGCCTCTCCCAAAGTCGGAAAGGCCA
GTCGTGGCCGTACCTTCTCCTCTTCTCTGTCCTCCTCCTCCTCACTACTA
TCCTCTTCCTCTTCTTCTTCCTGCTCTTCCTGCTCCCCTCTTCCCTCCTC
CTCGCCGCCCTTGATTCCCCCCTCCGTCCCTCCTTCCCTTGATGCCATCA
CCGCCCTGATCTCCCTCTTCAACTCTTCTCCTTCTTCCGGCAGAAGATCC
ACAAGATCTGCCATCACCCTCCGTCGTACCACCCCCAAAGGCATCAGTGT
CATGACCTGGGAGAAAGGCAGAAAGgtaaggaggaagggagggaagagtt
agaaacacgtggcgtggggaagaaggatttgggggagggaggaagggaga
gagagggagagagacaagtcagctacaagcttacttcctcattaaatccc
tactacccctacaaaaatccctctccctccccgtcctcaccttattgtag
TACTCAGCACTGGTCAACTCCCCACACCGGAATTGCCTCGACATGTCTCT
CAACTCGGTAAACGCCTCCACGCCAATCAACGACTGGATCCCTGCCGTTA
ATGCCTGTCCATTTAACGGACGAGAAATAGAATCCCTTTCGGTGCTCTGC
TGCTGCGGCTGCTTCTTTTTCTTCTTCTTCTTCCCTCCAGCCTTCCCTCC
TCCCCCAATATCCACCTCCGGGTAGGACCATCTATCCCTCTCGTCCACAA
CCCTCGCTCCCCTCGGCAACAACGCGTTCAAAAACGCCCCTCCTTCCCCT
CCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCACCACCCAGCGCAGG
GAAATCCTCCCTGCTCAAGCCACCTACCCCCGTCCTCCCTCCTGGTGCCA
CTCTCCCAACTCCTCCTCCTCTCCCTCCCCCTCCAACTGTAGCTGCTGCT
GCAGCTCCTACTGCTGCTCCCATCGGCATTATCCTCCCCCTCGTCCTCGC
CGTCTGCTGACTCAAATCCGGGAACTGTTCCGATGTCATTTGGAATGTTA
AAGGTGCCCCCCCCCCCCTCCCTCGTACCCTCCTTCCTCCCCTCCTTCGC
TTCCTCCCTTTTTCACCTTAAACGCCACCGCAAGCTTCCTGCTGCTGCTG
GGTGCTTGGTCGGGGTGGGCGGCGAGCAAGTGGCCTTGGTAATCGATGGG
GTTGGCGAACACGACGAAGCGCTGGGCGAGACAGCGGGGGTCTTCACACA
GGTGATGCTCCTGCCGGAAGTGGCGCTCTAGgtcggggtagtcactggag
gagggaaggggggagggaaggaggggggaagggaggggatgggagggggg
aagggaggggatgggataggcaccatgagtcgatggatggtggagagagg
gagggaggcaaggggggagggagggagggcaaggccacgtaccgataata
ccgatgttgaatccccgcatgtcgctcgcacagGTCACAGCTGTAATGGT
TCTTCACCAAGTGCTGGTACAACGCCCCCGTGTCGTAGAACCGTTGCTGC
TTGCAGAACTCACAGGCAGGATGACCGAAGAAGCCCCTGCTGGCATCGCC
TTTGTCTCTGTGCCGGGCCAGTTCCCCGCGGGTGTACAACGTCTGCTCTC
CCAGGAATGCCTTTTTATGCTCCACACACACATCGCACACAAACCGCTCG
TGCGCCCTCTGCAAGTGCTCCCGTAAACTTGGTAACGACCGACACAGGAG
GCCACAGCCCGGGGCACGACAAACAGCAGCATGCAGGAGTTGAAAGACGT
TTTGATAAAACGCCTTGGGCATGATGGTCCGACTTGCGTCGTCTGTAACC
GTCCCTGGGCCCCCGTCCATGCCCCAGATGGGGAGGGCAAGGAAGGGTTT
AATGTCTCGGGGGGAGTCAAAGATGAAGACGATGTCCTGTGGGGTCTTGC
ACATGGGGCAGTTCTGAATAAAGGCGGGAGAGAGGGAGGAAGGGTAGAAG
GGACAGTGGGGAGGAAAGGTGTTATTCGGAATTGGTCCTACTAGACGCAA
GCCTAGTATTAGAATTTAGTAATTTTTTCCCTCTCCAAAAACCTTCTTCC
AAACACTCTCCCTTTCTTTCCAACTTGATTAAACGAGAAAACAAAAAAAA
ACAAAGCGCTTTAGACTCTGTGCTTGATAAACTCGCGATCCTTTCCTCAC
CTGATCCCCCAACAGCCGGCGCAACCGCAAATAACACAAGGCACACGTAT
CCACATGCTCACACGCCCCCATCGCCGGCCGATGAATCTCACTGTTCAAT
GGCTCGGTACACACGGCACATACCAACCCATCAATCGACTCTTTTCGCGC
CGGAGTTACAGCCACCGCTGTTAGAGGCTGGCCATGCTCCTCATGTGCTA
CTGCCTCCCCGTTGATCTTGGCGAGCAACGCCAAGGCCTCCGGTCCCACG
TTTTTCTGGAAGCTCCCATCCTCCTTCAAGCTCATACCCGTAGCCATGGA
CTCAGCCAAGCCTGGTGGTGGGGGAGGTCCCGAGGGAACAGGGCGGTGGC
CACTGCTACAGCTGCTGCTGCCGAAGCCTCCTCCGCCACCTCTGCCCCCG
CCGCGACCACCACCTCCACCACCACCGCGTCTGTCTCCTCTTCCTCCTCT
TCCTCCTCCTCCTCCTCCTGCTCCTCCTCCTCGTGCATCTCCCCCCAATG
AGGAGCGAAAACTGCCACCCCCTCCGCCACCACCACCTCGTGCTTCTCCT
CGCGACCTCCCCCCCCACCCTGCCTCCCTCCACCTTTGCTGCTGCCTCCT
CCTCCACTTGCGCCGCTACCACTACCATCACCTGCGCCCGGCATTGTCAA
CACCACCTCGTATTGTCTCTCTGTAATGTGTGGTTGCGTCAATGTGAATT
CGCTTGTGTGTCATGCTTCGTGATGTTCTCATGCACGCCACCGCACACCG
CACGTTGACGGCATCGCTTTCTTCTGCCGCAACTGACAGCGCATCACCAT
CTCACAATGAATCTCCCTGCCCATCATCCACCACTCAGCAACCAACATCA
CCTATCCAACACACGCATCTGCCTATACAGCAGGAGCAGCAGGAGCAGCA
GGAGCAGCAAGAGCGGCGGCGGGCTGTGGCAGCAGCGGCTCTGACCAGCG
AGGTACAAAAAATGGAGCGATTAAAAACCTCCTCTCTCTTCCGCATTATC
TGATCACAATGCACCATGACCGCTGCATTCCACACTCCGGCCTCCGTCAC
CGCCTTGCTTCAAAGACTTGAGCTCTTAGGAGCTGAGACGGACACGGCGG
CGGTGAGTCTGACCCCCATTTCGGGTGGCAACACGAACCGCATCTATCGT
GTCACCTGTCACCTGCCTGAAGGCGGGCAAAGGGACATGCTCTTGCGTTT
CTTCGGCAAGGGCTCCGATGCTTTTATCGATCGGCTGCAAGAAGAACGAA
TCTTTCACGCCGTGTCTGCGGAAGGACTTTGTCCCAAGCTCCTGGCTACA
TTTCCTGAAGGCCGCGTCGAGGAGTTTGTGCCTGATGCCGAACCCTTGAC
TGCCTCGCAGTTCCGCAGCCCTGCCCTGTCCGCCTTGGTGGCCCGACAGC
TCCACGCCCTTCACAGTATCTCCCACGTGGATAAATTATCTAGACCAAGG
ATTCCGCCATTGTTTGCGCAATTACGGGACTGGGCGACGCGGGCGATGAC
GTTGTGTGGTGTTAAATATGAGGGGTTGGACGTAGCAGGGTTGGTGACTG
AGGTCGACCGGCTGGAGGCCCGTTTACTTGCTGTGGCGAGCCCGGTGTGT
CTTTGTCATAATGATTTGAATCATTTGAACGTGCTCTTGCGTGTTCGCGG
GGGAATGGCCGATAAGAGTGAAGAAAAGGCCAACAGAGGTTTAGATTCCA
ACAAGGATCAGGAAGAGGACAAGGAGAAAGATAGCATCGTTTTCGTCGAC
CTTGAGTACGCCGGATGGAACTATCGAGGTTTCGATCTGGGTAATCTGAT
CTGTGAATGGGCTAGTGACTTTCAATCCACCCATCCCCACCTCCTGGATT
TCACCCACCATTACCCAACAACACAACAACAGCACCACCTCGCGCGAGCC
TACTTAGGGGGAGGAGAGGACACGACGGAGGAAGACGTGGAAAATCTTGT
ATTTGAGATGCAGGAATTTTCGTTGGCATCTCATTTGATGTGGGGTGTGT
GGGGATTGTTGCAAGCAAAGTTGTCGACGATTGATTTTGATTTTGTCGGT
TTTGCCAGGCAGAGGCTGGACGAGTACTACAAGGGGATGGGGAGGAGTAA
AGGGTTGGGGGGGGGGGGGGGGCAGATGAGAAGGGGAAAGAAAGTATGA

protein sequence of NO02G04660.1

>NO02G04660.1-protein ID=NO02G04660.1-protein|Name=NO02G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MTAAFHTPASVTALLQRLELLGAETDTAAVSLTPISGGNTNRIYRVTCHL
PEGGQRDMLLRFFGKGSDAFIDRLQEERIFHAVSAEGLCPKLLATFPEGR
VEEFVPDAEPLTASQFRSPALSALVARQLHALHSISHVDKLSRPRIPPLF
AQLRDWATRAMTLCGVKYEGLDVAGLVTEVDRLEARLLAVASPVCLCHND
LNHLNVLLRVRGGMADKSEEKANRGLDSNKDQEEDKEKDSIVFVDLEYAG
WNYRGFDLGNLICEWASDFQSTHPHLLDFTHHYPTTQQQHHLARAYLGGG
EDTTEEDVENLVFEMQEFSLASHLMWGVWGLLQAKLSTIDFDFVGFARQR
LDEYYKGMGRSKGLGGGGGQMRRGKKV*

Synonyms

Publications