NO02G04550, NO02G04550 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G04550
Unique Name	NO02G04550
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3233
Alignment location	chr2:1230557..1233789 -

Link to JBrowse

Properties


Property Name	Value
Description	Amino acid permease family protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1230557..1233789 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1

Homology

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: EWM30262.1 (amino acid permease family protein [Nannochloropsis gaditana])

HSP 1 Score: 933.3 bits (2411), Expect = 4.300e-268
Identity = 485/673 (72.07%), Postives = 573/673 (85.14%), Query Frame = 0

Query:   30 TTAISRGSNHHHFPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAPPSLASVLKKELKSLRSEEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPDWKHRIDRLKGVRVITH 703
            T A +RG  + HFPG GTY+E I +DD  ++ AAHAL+ + HPHEMLGP  +SSICGNDILSSCFYSIGLVTS AGQLAP+CFL+VGL+LYLFRSVYGEAITAI  NGG Y LLINT++KAVAA+AACLS+LAYIATGVVSAVTACNYLHAV PDLI+VP+AACCLL+LFA +VGMGL+ESAGVA VICA+HV T  +LL LG +YV+FN+LGEL AN  LPFP V++T   N G + G  GA  VG   ED+LPGSI TAL+FG AAG+LGVSGFETS+QY+ESQKPGVFLLTLK MQQAVCVFNPLLSLLSIAVLPVPV+ A+S+TVLERVA  +G+W+QA LGLGP   P S ++ G+  RIWVSLDAFVVLSGAVLTAYVGIDGL+YSM++DGCLPSFLL RN WRGTDH+IILSYL LA+SQV+L  GDVEALAGVYAFSFLGVM LFA GC MLKVKR++LPR+V+APWSHV+GGG+AV+LAFLVNL SQS+YL+YF LYL+GVG+L F+MFQRVRLLK+LIYF+PPS+A++L ++L +LRS+ +VFFCKDPKD+Y+LNKAL YVRANESTV  V VVHCRG  E  G E+G+ K     GA+ ++M+D+MYPAI VS +QV +AF+ EVVE LS +LD+G+E M ISCPD KH ID+L+GVRVITH
Sbjct:   35 TQAKARGLRNKHFPGLGTYDEHIHVDDVQLSKAAHALERQNHPHEMLGPWMASSICGNDILSSCFYSIGLVTSYAGQLAPLCFLLVGLILYLFRSVYGEAITAIPVNGGTYTLLINTTSKAVAAAAACLSVLAYIATGVVSAVTACNYLHAVLPDLIDVPIAACCLLSLFALVVGMGLKESAGVAMVICAVHVLTFFVLLSLGFLYVIFNNLGELPANLLLPFPDVAVTTAKNGGEIEGAVGA--VG---EDMLPGSIGTALIFGCAAGLLGVSGFETSSQYVESQKPGVFLLTLKYMQQAVCVFNPLLSLLSIAVLPVPVITAFSQTVLERVAHTIGDWVQATLGLGPHTGPGSTVDFGKFLRIWVSLDAFVVLSGAVLTAYVGIDGLLYSMSMDGCLPSFLLARNAWRGTDHYIILSYLALAISQVLLTGGDVEALAGVYAFSFLGVMALFAAGCAMLKVKRSQLPRDVVAPWSHVIGGGAAVLLAFLVNLQSQSEYLLYFLLYLAGVGMLTFLMFQRVRLLKVLIYFSPPSVAALLVEKLLALRSDRVVFFCKDPKDLYILNKALTYVRANESTVHHVTVVHCRG--EGVGQEDGEGK----AGAKAVEMIDRMYPAIRVSMVQVHRAFTPEVVEALSKILDVGREHMFISCPDGKHPIDKLRGVRVITH 696

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: CBJ32260.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 493.8 bits (1270), Expect = 8.800e-136
Identity = 298/667 (44.68%), Postives = 413/667 (61.92%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAPP----SLASVLKKELKSLRSEEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPD--WKHRIDRLKGVRVITH 703
            FPGWG++         A++  +         HE LG   +++I GNDILSS  Y  GLVT  AG L+P+C LMV  +LYL+R +YGEAI+A+  NGG Y +LINT++K VA+ AACL++++YIATGVVSA TA +YL  + P    +      LL  FA ++ MG+ ESAGVA  +  +HV TL  + VL   Y  +N +  L+ N    FP+V++ GT                     V+ G+  TA+LFG ++ +LGVSGFE+S+Q++E Q  GVF+ TL+NMQ  V VFNP + LLS+ VLP+  ++ Y  ++L  +A  +G W    LGL     P   ++LG +F  WVSLDAFVVLSGAVLTAYVGI GL+  M  D CLP F+L +N+WRGT H+ I  + LLA SQV++L+GD+  L+GVY FSFLGVMTLF++G  +LK KR  LPREV   ++  + G + VI AF+ N+ S+ + + +F +Y   VG ++ ++F RVRLLK+L+ FA P     + S +K +L  L+ E  VFFCK P D YV+NKA+LYVR NE T + ++VVHC    E   I         +  ++ I+M D MYP I +S L V  +FS   ++ LS  L + K K  I+C D  +K++I  L GVRVITH
Sbjct:  147 FPGWGSHFTMNPPPGLALSNPS----KDNGGHEKLGEWYATAISGNDILSSVLYVTGLVTGFAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVASFAACLAVISYIATGVVSAATAVSYLQTLIP-AAGLMTCTIGLLFFFACLMTMGISESAGVALGMFVVHVFTLTAVCVLSACYAFYN-VTILKENLQQDFPAVTVGGT---------------------VVEGTWVTAILFGVSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQWGVAVFNPAICLLSLCVLPMEEIIEYKHSMLAIMAKRVGYWAGGCLGL-----PTPGLDLGEIFAFWVSLDAFVVLSGAVLTAYVGISGLLARMAKDRCLPQFMLRKNKWRGTYHYTIFGFFLLATSQVIILQGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAHPVCCDGVTSSIKDQLHELQDEPFVFFCKQP-DTYVINKAILYVRDNEHT-NRLIVVHCSNDVEGATI---------KTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLSQELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 770

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: OEU08445.1 (hypothetical protein FRACYDRAFT_212710 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 461.5 bits (1186), Expect = 4.800e-126
Identity = 277/675 (41.04%), Postives = 401/675 (59.41%), Query Frame = 0

Query:   40 HHFPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPD--LINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRL--LKLLIYFAPPSLASVLKKEL-------KSLRSEEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPDWKHRI--DRLKGVRVIT 702
            H F G+G+Y+ +     + I    H+   +    + LG L++++I GNDILSS FY  GLV++ AG+LAP+C  +VG VLYLFR +Y E + A+  NGG Y +L+N ++K  A+ AA  +I+AYI TGVVSA+ A  YL  + P+   I+  +A   LL  F  +  +G+ ESA VA  I  IHV  L+LL +LG++Y +FN    L  N+  P+PSV   G                     +VL G+ +TA+ +GF++ +LGVSGFETS+Q++E Q  GVF  TLKNM   V VFNPLLSL+S A +P+  ++   +TVL R+A V+G W Q  L +     P+  ++LG LF   +S+DAF+VL+ A+LT YVGI+GLI  M++D CLP F L  N W GTD FI+  + LL VSQV+LL+ DVEAL GVY ++FL VMT+FA+G  +LK+KR  LPRE+   W   + G  +V++A L N+  + + L YF +Y   +G L+ VMFQR +   L   IY       +  K+E+       K+ +    VFF K   D+++ NKA+LY+R NE T + ++ VHC G          ++          +K++D +YP I +S L V+  F+A  VE LS  +++    M ISCPD    I   +L+G+R+IT
Sbjct:   37 HDFAGYGSYDVKTTPSVSDIQSIDHSFHEKEQGEKKLGELEATAISGNDILSSTFYVSGLVSTSAGKLAPLCLTLVGFVLYLFRGIYHETVMALPCNGGTYNILLNCTSKQTASIAAVFAIIAYITTGVVSAIEAIAYLQTILPEDCQIDQQIATIALLFFFCLLTNLGMSESAFVAKSIFVIHVAVLSLLTILGVIYTIFNS-ELLFENWETPYPSVDAAG---------------------EVLTGTFFTAIFYGFSSAMLGVSGFETSSQFVEEQAAGVFPKTLKNMWVGVMVFNPLLSLVSFAAMPLQEIMDNKDTVLARMARVVGEWFQGCLFI-----PEHYVSLGSLFSFIISVDAFIVLAAALLTGYVGINGLIRRMSMDRCLPQFFLISNPWTGTDSFILCGFFLLCVSQVILLDSDVEALGGVYCYAFLTVMTIFALGNILLKIKRPTLPREITTSWLQSILGLVSVVIALLGNILGKPELLTYFFVYFLIIGTLVLVMFQRTQKTNLSFQIYTTMILALTTKKREIITIADTVKNFQDIPFVFFVKH-DDLHMANKAVLYIRKNEQT-NKIIFVHCNGTSTETSTSNLQDH---------VKLLDLLYPRIKISLLVVNSNFNATTVEWLSRSIEVPINAMFISCPDENFSIKKSQLRGIRIIT 673

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: EWM28484.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 454.5 bits (1168), Expect = 5.900e-124
Identity = 283/669 (42.30%), Postives = 400/669 (59.79%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPVVVAYSETVLERVADVMGNWLQAALGLG--PVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIY----FAPPSLASVLKKELKSLRSEEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPD--WKHRIDRLKGVRVITH 703
            FPGWG YN Q+ + D  +      +D ++ P   L   ++++ICGNDI++SCFY +GLVT  AG++AP+  L+V  VLYL R +Y EAITA+  NGG + +L+N+++K +A+SAA L++++YIATGVVSA +A +YL  V   + N  +A   LL LFA +V +G++ESAGVA VI  IH+ TL LL    +VYV+  D   LR NF  P+P V       LGGV               +  GS  TA+ FG+ + ILGVSGFE+S+Q+++SQ PGVFL TL+NM     VFNP +S LS+ VLP+  +V     VL ++A  +G+W+    G G    R   + +  GR   IWVSLDAF+VLSG++LTAYVG+ GLI  M  D CLP FLL RN WR T H IIL YL+ +   V++LEG+V  L+GVY+ +FL V+ LF +G  +LK KR  LPR+V   W  V+   + +++  L NL      L+ F  Y++  G L+ +MFQ   LL+  +       P     VL+KEL   +S   +FFCK   D+YVLNKALLYV ANE +   ++V+H   K++                +  ++  D MYP I  + L ++  F   ++E L   L +    M I+ PD  +K+++D+L GVRVITH
Sbjct:   78 FPGWGRYNLQMTVTDEELAEIEADMDQQQPP--KLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVV-SVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVV-ADPSTLRENFRAPYPDV------ELGGV---------------IRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCK-ADDVYVLNKALLYVTANEQS-RHLMVIHVHDKDQFP----------PPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: OWZ24766.1 (hypothetical protein PHMEG_000122 [Phytophthora megakarya])

HSP 1 Score: 433.3 bits (1113), Expect = 1.400e-117
Identity = 288/687 (41.92%), Postives = 390/687 (56.77%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPV---PVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAP---PSLASVLKKELKSLRS-----------------EEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHC--RGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCP--DWKHRIDRLKGVRVIT 702
            FPGWG     +  D     +  H       PH  L    +++ICGNDILSSC Y  GLV S AG+LAP+   +V  +LYL+R +YGE + A+  NGG Y +L+NT++K VAA AA L+IL+YIATGVVS  +ACNYL +  P L  VP A   LL +FA +  +G+ ESA VA VI   H  TL +L VL  VYV+ +D   LRANF   FP +++ G                     D++ G+  TA+ FG +  +LG+SGFETS+Q++E Q  GVF  TL+NM   V +FNP+++LLS+ VLP+     +V    TVL            A +GL            G   ++ V+LDAF+VLSGAVLTAYVG+ GL+  +  D  +P FLL  N+ RGT+HFII+ Y ++A S V++L GD E L+GVY ++FLG+MTLF IGC +LK KRAE+PR VIAPW   + G S VI  F+ NL      L YF LY   V  L+++MF+R  LL++ +YF     PS  S  + E  SLR+                   ++FFCK P ++ ++NKA+LYVR NE T  ++ +VHC  RG     G +E            T+ M D +Y  I ++FL V+  F   +VE +S   +  K  M I  P  D+ H I  L GVRVIT
Sbjct:   30 FPGWGDNASTVASDSELNEIQTHL----SVPHTKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVP-ATIGLLFIFALLSLIGITESAVVALVIFIAHATTLVVLCVLSAVYVVKDDFQTLRANFDTDFPDINLAG---------------------DIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKKNTVL------------AEMGLKVA---------GERMQLMVALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPDFLLHVNKARGTNHFIIIGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGIGCMLLKFKRAEIPRSVIAPWWACVLGVSMVITTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMSLYFMRQLCPSQRSDDEDETHSLRTGARGGQTIARFIREINEPAVLFFCKTP-NLNIINKAILYVRTNEQT-HTLFIVHCHPRGTAVPEGFKE------------TVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYNQPKNLMFIKQPNHDFAHTIASLGGVRVIT 655

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BLAST of NO02G04550 vs. NCBI_GenBank
Match: POM62211.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 427.2 bits (1097), Expect = 1.000e-115
Identity = 284/686 (41.40%), Postives = 393/686 (57.29%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAH-ALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPV---PVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAP---PSLASVLKKELKSLRS-----------------EEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCP--DWKHRIDRLKGVRVIT 702
            FPGWG     +  D     +  H ++D     H  L    +++ICGNDILSSC Y  GLV S AG+LAP+   +V  +LYL+R +YGE + A+  NGG Y +L+NT++K VAA AA L+IL+YIATGVVS  +ACNYL +  P L  VP A   LL +FA +  +G+ ESA VA VI  +H  TLA+L VL  +YV+ +D   LRANF   FP +++ G                     D++ G+  TA+ FG +  +LG+SGFETS+Q++E Q  GVF  TL+NM   V +FNP+++LLS+ VLP+     +V    TVL            A +GL            G   ++ V+LDAFVVLSGAVLTAYVG+ GL+  +  D  +P FLL  N+ RGT+HFII+ Y ++A S V++L GD E L+GVY ++FLG+MTLF IGC +LK KRAE+PR  IAPW   + G S V+  F+ NL      L YF LY   V  L+++MF+R  LL++ +Y      PS  S  + E  SLR+                   + FFCK P ++ ++NKA+LYVR NE T  ++ +VHC  ++    + EG ++        T+ M D +Y  I ++FL V+  F   +VE +S   +  K  M I  P  D+ H I  L GVRVIT
Sbjct:   16 FPGWGDNTSTVASDSELNEIQTHLSVD-----HPKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVP-ATVGLLFIFAILSLIGITESAVVALVIFIVHATTLAVLCVLSAMYVVKDDFQTLRANFDTDFPDINLAG---------------------DIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKKNTVL------------AEMGLKVA---------GENMQLVVALDAFVVLSGAVLTAYVGVVGLVRRLASDRVVPDFLLHVNKARGTNHFIIIGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGIGCMLLKFKRAEIPRTTIAPWWSCILGVSMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMSLYCMRQLCPSQRSNDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTP-NLNIINKAILYVRTNEQT-HTLFIVHCHPRDT--AVPEGFKE--------TVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYNQPKNLMFIKQPNHDFAHTIASLGGVRVIT 641

[Close]

BLAST of NO02G04550 vs. NCBI_GenBank
Match: OQR90523.1 (hypothetical protein THRCLA_09308 [Thraustotheca clavata])

HSP 1 Score: 424.9 bits (1091), Expect = 5.000e-115
Identity = 280/690 (40.58%), Postives = 392/690 (56.81%), Query Frame = 0

Query:   42 FPGWGTY-------NEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRAN-FHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAPPSLASVLKKE----------------LKSLR----SEEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPDWK--HRIDRLKGVRVIT 702
            FPGWG Y        E + I+D            +R  H  L    +++ICGNDILSSC Y  GLVT+ AG+LAP+  ++V  +LYL+R +YGE + AI  NGG Y +L+NT++K VA+ AA L+IL+YIATGVVS  +AC YL A  P L  VP A+  LL  FA +  MG+ ESA VA VI  IH  TL +L V+ ++++  N+   L  N F   FP V++ GT                      + G ++TAL FG +  +LG+SGFE+S+Q+++ Q PGVF  TLKNM   V VFNPLLS LS+ V+P+  +  +  TVL ++A V+G                     G+  +  VS+DAF+VLSGAVLTAYVGI+GL+  +  D  LP FLL  N  R T+H+I+  Y  +A S V++LEG+VE L+GVY ++FLG+MTLF  GC +LK KRA+L R+VIAPW   + G S VI+AF  NL      L YF LY S V  ++F+MF+R+  L+L++Y       S  K+                 +K++R    +   VFFCK+P D+  +NKA+LYVR NE +  ++++VH    EE      G+          +I M D++YP + + F+ +   F   ++E +S    I K  M I  P  +  H I  L GVR+IT
Sbjct:   36 FPGWGKYISTNVKKEELMEIEDTL----------KRREHRKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPLDLVLVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSATVPTLSVVP-ASIGLLFFFAVLTCMGISESAMVALVIFIIHTLTLVVLCVMSVLFMAKNNFSILYENLFQTDFPEVNVAGT---------------------WVSGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAVFNPLLSFLSLGVMPMSNINMFKNTVLSQMALVVG---------------------GQTLQTIVSIDAFIVLSGAVLTAYVGINGLVRRLASDHILPEFLLHENSCRRTNHWILFGYFGIATSLVLVLEGNVETLSGVYTYAFLGLMTLFGTGCMLLKFKRADLRRDVIAPWWTCIVGVSLVIVAFFGNLCGDPTILTYFALYFSCVIFVVFIMFERLFFLRLIMYALQRICPSREKQSSEDTALATGARGGRTIVKAMRQITNACPTVFFCKNP-DLPTINKAILYVRKNEQSC-NLVIVHVHDSEEGVSSRFGE----------SIAMFDRIYPKLKIDFIAIQSTFGPALIEWVSTQYSIPKNMMFIKQPSTESVHNIASLGGVRIIT 660

[Close]

BLAST of NO02G04550 vs. NCBI_GenBank
Match: XP_009519035.1 (hypothetical protein PHYSODRAFT_485543 [Phytophthora sojae] >EGZ23747.1 hypothetical protein PHYSODRAFT_485543 [Phytophthora sojae])

HSP 1 Score: 422.5 bits (1085), Expect = 2.500e-114
Identity = 286/686 (41.69%), Postives = 389/686 (56.71%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVP---VVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAP---PSLASVLKKELKSLRS-----------------EEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHCRGKEEHG-GIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCP--DWKHRIDRLKGVRVIT 702
            FPGWG     +  +     + AH   S  HP   L    +++ICGNDILSSC Y  GLV S AG+LAP+   +V  +LYL+R +YGE + A+  NGG Y +L+NT++K VAA AA L+IL+YIATGVVS  +ACNYL +  P L  VP A   LL +FA +  +G+ ESA VA VI   H  TL +L VL  VYV  +    L ANF   FP +++ G                     D++ G+  TA+ FG +  +LG+SGFETS+Q++E Q  GVF  TL+NM   V +FNP++SLLS+ VLP+     +V    TVL            A +GL    E   +I         V+LDAF+VLSGAVLTAYVG+ GL+  +  D  +P FLL  N+ RGT+HFII+ Y L+A S V++L GD E L+GVY ++FLG+MTLF +GC +LK KRAE+PR VIAPW   + G + V+  F+ NL      L YF LY   V  L+++MF+R  LL++ +Y      PS  S+ + E  SLR+                   + FFCK P ++ ++NKA+LYVR NE T  ++ +VHC     HG  + EG ++        T+ M D +Y  I ++FL V+  F   +VE +S      K  M I  P  D+ H I  L GVRVIT
Sbjct:   48 FPGWGDNLTAVASESELNEIRAH--QSMDHP--KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVP-ATVGLLFIFAMLSLIGITESAVVALVIFITHATTLTVLCVLSAVYVWNDGFQTLHANFSTDFPDINLAG---------------------DIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMISLLSLGVLPLDGPGGIVDKKNTVL------------AEMGLKVAGENMQLI---------VALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKARGTNHFIIIGYFLVATSLVLILHGDTETLSGVYTYAFLGLMTLFGMGCMLLKFKRAEIPRSVIAPWWSCVLGVTMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSIDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTP-NLNIINKAILYVRTNEQT-HTLYIVHC---HPHGTPVPEGFKE--------TVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHDFAHTIASLGGVRVIT 673

[Close]

BLAST of NO02G04550 vs. NCBI_GenBank
Match: XP_008892125.1 (hypothetical protein PPTG_02659 [Phytophthora parasitica INRA-310] >ETI49800.1 hypothetical protein F443_06558 [Phytophthora parasitica P1569] >ETK89564.1 hypothetical protein L915_06427 [Phytophthora parasitica] >ETL42965.1 hypothetical protein L916_06373 [Phytophthora parasitica] >ETL96141.1 hypothetical protein L917_06241 [Phytophthora parasitica] >ETM49295.1 hypothetical protein L914_06354 [Phytophthora parasitica] >ETN22906.1 hypothetical protein PPTG_02659 [Phytophthora parasitica INRA-310] >ETO78356.1 hypothetical protein F444_06624 [Phytophthora parasitica P1976] >ETP19437.1 hypothetical protein F441_06563 [Phytophthora parasitica CJ01A1] >ETP47356.1 hypothetical protein F442_06602 [Phytophthora parasitica P10297])

HSP 1 Score: 421.4 bits (1082), Expect = 5.500e-114
Identity = 283/687 (41.19%), Postives = 386/687 (56.19%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPV---PVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAP---PSLASVLKKELKSLRS-----------------EEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHC--RGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCP--DWKHRIDRLKGVRVIT 702
            FPGWG  +  +  D     + AH        H  L    +++ICGNDILSSC Y  GLV S AG+LAP+   +V  +LYL+R +YGE + A+  NGG Y +L+NT++K VAA AA L+IL+YIATGVVS  +ACNYL +  P L  VP A   LL +FA +  +G+ ESA VA VI   H  TL +L VL  +YV+ +D   L ANF   FP +++ G                     D++ G+  TA+ FG +  +LG+SGFETS+Q++E Q  GVF  TL+NM   V +FNP+++LLS+ VLP+     +V    TVL            A +GL    E   +I         V+LDAF+VLSGAVLTAYVG+ GL+  +  D  +P FLL  N+ RGT+HFII+ Y ++A S V++L GD E L+GVY ++FLG+MTLF  GC +LK KRAE+PR VIAPW   + G S V+  F+ NL      L YF LY   V  L+++MF+R  LL++ +Y      PS  S  + E  SLR+                   + FFCK P ++ ++NKA+LYVR NE T  ++ +VHC  RG     G +E            T+ M D +Y  I ++FL V+  F   +VE +S      K  M I  P  ++ H I  L GVRVIT
Sbjct:   48 FPGWGDNSSTVASDSELNEIQAHLSTD----HTKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVP-ATVGLLFIFAVLSLIGITESAIVALVIFIAHATTLVVLCVLSAIYVVKDDFQTLWANFDTDFPDINLAG---------------------DIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKRNTVL------------AEMGLKVAGEKMQLI---------VALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKARGTNHFIIIGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGTGCMLLKFKRAEIPRTVIAPWWSCILGVSMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSNDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTP-NLNIINKAILYVRTNEQT-HTLFIVHCHPRGTAVPEGFKE------------TVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHNFAHTIASLGGVRVIT 673

[Close]

BLAST of NO02G04550 vs. NCBI_GenBank
Match: KUF80027.1 (Thioredoxin [Phytophthora nicotianae])

HSP 1 Score: 420.6 bits (1080), Expect = 9.400e-114
Identity = 283/687 (41.19%), Postives = 385/687 (56.04%), Query Frame = 0

Query:   42 FPGWGTYNEQIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLVTSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKAVAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFAFIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHLPFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGILGVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPV---PVVVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDAFVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYLLLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREVIAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRVRLLKLLIYFAP---PSLASVLKKELKSLRS-----------------EEMVFFCKDPKDMYVLNKALLYVRANESTVDSVLVVHC--RGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAICVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCP--DWKHRIDRLKGVRVIT 702
            FPGWG  +  +  D     + AH        H  L    +++ICGNDILSSC Y  GLV S AG+LAP+   +V  +LYL+R +YGE + A+  NGG Y +L+NT++K VAA AA L+IL+YIATGVVS  +ACNYL +  P L  VP A   LL +FA +  +G+ ESA VA VI   H  TL +L VL  +YV+ +D   L ANF   FP +++ G                     D++ G+  TA+ FG +  +LG+SGFETS+Q++E Q  GVF  TL+NM   V +FNP+++LLS+ VLP+     +V    TVL            A +GL    E   +I         V+LDAF+VLSGAVLTAYVG+ GL+  +  D  +P FLL  N+ RGT+HFII  Y ++A S V++L GD E L+GVY ++FLG+MTLF  GC +LK KRAE+PR VIAPW   + G S V+  F+ NL      L YF LY   V  L+++MF+R  LL++ +Y      PS  S  + E  SLR+                   + FFCK P ++ ++NKA+LYVR NE T  ++ +VHC  RG     G +E            T+ M D +Y  I ++FL V+  F   +VE +S      K  M I  P  ++ H I  L GVRVIT
Sbjct:  185 FPGWGDNSSTVASDSELNEIQAHLSTD----HTKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVP-ATVGLLFIFAVLSLIGITESAIVALVIFIAHATTLVVLCVLSAIYVVKDDFQTLWANFDTDFPDINLAG---------------------DIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKRNTVL------------AEMGLKVAGEKMQLI---------VALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKARGTNHFIIFGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGTGCMLLKFKRAEIPRTVIAPWWSCILGVSMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSNDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTP-NLNIINKAILYVRTNEQT-HTLFIVHCHPRGTAVPEGFKE------------TVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHNFAHTIASLGGVRVIT 810

The following BLAST results are available for this feature:

BLAST of NO02G04550 vs. NCBI_GenBank

BLAST of NO02G04550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM30262.1	4.300e-268	72.07	amino acid permease family protein [Nannochloropsi...	[more]
CBJ32260.1	8.800e-136	44.68	conserved unknown protein [Ectocarpus siliculosus]	[more]
OEU08445.1	4.800e-126	41.04	hypothetical protein FRACYDRAFT_212710 [Fragilario...	[more]
EWM28484.1	5.900e-124	42.30	transmembrane protein [Nannochloropsis gaditana]	[more]
OWZ24766.1	1.400e-117	41.92	hypothetical protein PHMEG_000122 [Phytophthora me...	[more]
POM62211.1	1.000e-115	41.40	Transmembrane protein [Phytophthora palmivora var....	[more]
OQR90523.1	5.000e-115	40.58	hypothetical protein THRCLA_09308 [Thraustotheca c...	[more]
XP_009519035.1	2.500e-114	41.69	hypothetical protein PHYSODRAFT_485543 [Phytophtho...	[more]
XP_008892125.1	5.500e-114	41.19	hypothetical protein PPTG_02659 [Phytophthora para...	[more]
KUF80027.1	9.400e-114	41.19	Thioredoxin [Phytophthora nicotianae]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007126	NSK007126	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G04550.1	NO02G04550.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|562892	gene_1048	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100003g17	gene445	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G04550.1	NO02G04550.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G04550 ID=NO02G04550|Name=NO02G04550|organism=Nannochloropsis oceanica|type=gene|length=3233bp
CGCGGCTTGGAATTTAGGGAACAGGTACATTTTAAACGGAATTTAACAGG
CAGAAACAATGCTGTCTATGAAGATTGTGTGCCCTCAGTCCAATGGTGTA
GGTAACACATGAAGGGTAACCGTCTCCCGTCTTGTTATAGTCTCCGCCTT
TCGCTTCTTGATGCTCGAATCTCATTCTAACAATCTTCGAGATCTTTCAA
ACGAATTCCAAGTTTTGGTCTTCCGTACTTAGCTCCTTGTATGAGACGAC
CTTTGCATGTTATGCCCTCCGTTCACAACCTCCTCACCACCTAGTTGCCT
CTTCTCGCCTTGCAAGCGACACAAGTGAAGTCCCCACAATGCCTTTACTC
GGCCCTCAAACACCAATTTATTTTCTCCACATGCATTTGGTCACATTTAG
GCATGAAGAAGTGTCATCTACCGTGGGTCAGAGCGCGACAAGACGGTGGA
ACAAATCGCGGAATTGATGGCGCAAGCTAAATGATTCATCTCTTGCCCCG
AGGCGGAGACCTGAACACGATGCGACTTGCACGGACATGCACGCAGTTAT
CACTCACCGCCTCTCCCACGACCTTTATACAGGCCCGGCCCAGCTTGTGC
TGCTGGTGGGGGTGGTATCCTCCTCCCTGCATCCCAAATCGACAGGTTCT
CTCCAGCGCCAGTCCTGTTGCTTCTGCATGGCCCCTCTGACCACGCTACC
ACAACATGACGGCCGCCACTTGCCTCAACGAGGCTACACGATTACTAAAC
GTCAACAATACCATATTACAAACCAATGCCCCAGTGTCCACCACCACTGC
TATTTCCCGCGGCAGCAATCACCACCACTTCCCCGGCTGGGGCACCTACA
ATGAGCAGATTCGTATCGATGACGCCGCCATCACCATGGCTGCCCATGCC
TTGGACAGCCGCCGGCATCCGCACGAGATGCTGGGTCCTTTGCAGTCGTC
ATCCATCTGCGGCAACGACATTCTAAGTTCTTGTTTCTATTCCATCGGTT
TGGTCACTAGTTGTGCGGGCCAGCTTGCCCCTATCTGCTTTTTGATGGTA
GGGCTGGTGCTGTACCTGTTTCGGTCGGTGTATGGAGAGGCCATCACAGC
TATTTGTCAAAATGGTGGAATATATGCCTTGCTGATCAATACCTCTACGA
AAGCAGTGGCAGCTAGTGCTGCCTGTTTGAGTATTTTGGCGTATATCGCC
ACGGGTGTCGTGTCTGCAGTCACGGCCTGCAACTATTTGCATGCCGTCTT
TCCTGATTTAATCAACGTACCTGTTGCCGCCTGCTGTTTGCTTGCTCTCT
TTGCGTTTATCGTCGGGATGGGATTACGGGAAAGCGCAGGGGTAGCAACG
GTGATTTGTGCCATCCATGTCGGCACCTTAGCATTGCTCCTGGTCCTGGG
GCTTGTGTATGTCCTTTTCAACGACCTGGGAGAGCTAAGGGCTAATTTTC
ATTTGCCGTTCCCAAGCGTGTCTATCACAGGCACTGATAATTTGGGTGGA
GTCGGGGGACTTAAAGGGGCTGGAAATGTGGGAGGGTCGGAGGAGGATGT
TTTGCCTGGGAGCATTTGGACGGCGTTGTTGTTTGGGTTCGCCGCGGGAA
TTTTGGGAGTGAGTGGCTTTGAGACATCTGCACAGTACATTGAAAGTCAG
AAGCCGGGCGTCTTTCTCCTCACGCTGAAAAATATGCAACAAGCGGTCTG
TGTCTTCAATCCTCTCCTCTCTCTTCTGTCCATCGCCGTGTTGCCCGTCC
CCGTCGTTGTGGCGTACTCCGAGACCGTACTCGAGCGGGTCGCCGACGTC
ATGGGGAACTGGCTTCAAGCAGCCCTTGGACTCGGGCCAGTCAGGGAACC
AGACAGCATGATTAATCTGGGGCGGTTGTTTAGAATCTGGGTGTCCCTAG
ATGCGTTCGTGGTGCTCAGTGGCGCAGTCTTGACGGCGTATGTCGGAATC
GATGgtaaggaagaagacgggatgggtcgtcaagcagatatgaaaagcct
ttctgtctacattgatataatggctatctcttacttacttcctttgttca
ctcgcttcctcccacacagGCTTGATCTATAGCATGACGATAGACGGGTG
CTTGCCTTCATTTTTGCTGACGCGGAATGAATGGCGCGGGACGGACCATT
TCATTATTTTGTCCTATTTGTTGTTGGCTGTCAGTCAGgtacggtggagg
aatgagttttgacaaaaagcattcacacagtcatacctcttctccctctc
tctctccctccctccctccattccttcttctcagGTAGTGCTCCTGGAAG
GCGACGTCGAAGCCTTGGCCGGCGTGTACGCCTTCTCATTCCTCGGCGTC
ATGACCCTATTTGCCATCGGTTGTGGAATGCTGAAGGTAAAACGGGCTGA
GCTCCCACGCGAGGTGATAGCGCCTTGGTCGCACGTGATGGGAGGCGGGT
CCGCGGTCATTTTAGCGTTCTTGGTGAATCTGGCGAGTCAGTCTGATTAT
CTGGTATATTTTTGTTTGTACCTCTCGGGGGTTGGCGTCTTGATTTTTGT
TATGTTTCAACGCGTACGGCTACTCAAGCTCTTAATCTACTTTGCGCCGC
CGTCCCTCGCGTCAGTGCTGAAGAAGGAGTTGAAATCGCTGCGTTCGGAG
GAGATGGTATTCTTTTGCAAAGACCCCAAAGACATGTATGTCCTAAATAA
AGCGTTGTTGTACGTACGTGCCAATGAAAGTACGGTAGACTCTGTCCTTG
TCGTGCATTGCCGGGGAAAAGAGGAGCACGGCGGTATCGAGGAAGGGAAG
GAAAAAGAGTGGGAGAGGGAGGGGGCTAGGACCATAAAAATGATGGATCA
GATGTATCCCGCGATATGCGTGAGCTTTTTGCAGGTCGATCAAGCATTCA
GCGCCGAAGTGGTGGAGGTACTTTCGAACTTGTTGGATATCGGAAAGGAG
AAGATGATGATTTCGTGCCCGGACTGGAAGCACCGAATAGATCGGTTGAA
GGGAGTAAGGGTGATCACGCACTAAAAACGAAGGCGGAAAGGAGAAGGGG
GAGGAAAAGATCTGAATGCATGAAATGAAGCTCAAGGAGAGTGATCCAAC
AAAAAAGAGCATTTAAAATGTAAGCAATGTTTTGAAGATGAATAAAAGGA
AATTGAGATACATGTCGAGAATTCAATTCATTGGCTCACAGCTATGGCTC
CACAATGTCGCGGGCGCATGAGGCGGGGGTGTT

protein sequence of NO02G04550.1

>NO02G04550.1-protein ID=NO02G04550.1-protein|Name=NO02G04550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=703bp
MTAATCLNEATRLLNVNNTILQTNAPVSTTTAISRGSNHHHFPGWGTYNE
QIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLV
TSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKA
VAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFA
FIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHL
PFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGIL
GVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPV
VVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDA
FVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYL
LLAVSQVVLLEGDVEALAGVYAFSFLGVMTLFAIGCGMLKVKRAELPREV
IAPWSHVMGGGSAVILAFLVNLASQSDYLVYFCLYLSGVGVLIFVMFQRV
RLLKLLIYFAPPSLASVLKKELKSLRSEEMVFFCKDPKDMYVLNKALLYV
RANESTVDSVLVVHCRGKEEHGGIEEGKEKEWEREGARTIKMMDQMYPAI
CVSFLQVDQAFSAEVVEVLSNLLDIGKEKMMISCPDWKHRIDRLKGVRVI
TH*

Synonyms

Publications