NO02G04260, NO02G04260 (gene) Nannochloropsis oceanica

Overview
NameNO02G04260
Unique NameNO02G04260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2988
Alignment locationchr2:1159098..1162085 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1159098..1162085 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037191VPS9_dom_sf
IPR003123VPS9
Homology
BLAST of NO02G04260 vs. NCBI_GenBank
Match: EWM30217.1 (hypothetical protein Naga_100003g51 [Nannochloropsis gaditana])

HSP 1 Score: 249.2 bits (635), Expect = 5.300e-62
Identity = 282/767 (36.77%), Postives = 354/767 (46.15%), Query Frame = 0
Query:    9 SGSAA-AGCPASVPVCVAEVTMDVLSPRATSPSSPP-----KPQRAKPKPSTLQSLVSANAPQPPHTPSSPLLQQSLEELERGSTLTSPFTSTARPWGEKGLPFESHCHPRSPVRLAGIANVEESA-PSKFLVEAAPLVSKLDLSTAETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALQHSLVESAFPSTASTSLLTKCNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPSIFPAXXXXXPLSASSSLLHGIHLTAEELPPLPGTPTDVSPATLRQKELELALAEDGFLTSPSGSSSGEEEGSPVDSDGAGTSPTSSATCTLRPDDQPLHLVDPPALFTPTT------ITPRPHAKRRLSLPSLAF--TP----------SSSRNTGGAMTLDSIRAKFASGVSGKRTXXXXXXXXXXXXXXGAYTPVNVDSGALGVATPSAAAEEEEIDR---AGLLLIQSARRLGLDITGLRKALLIRVLGVEPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVMPVGWLRXXXXXXXXXXXXXXXXXHEARRKNGTSSE--IETYGIVVWVLDVESGQEWRVRKGPLEFLALHEVVSMLRPESFWTEGAAFPLKRHKNETRPPSVEKQAKLEKYLRRLAEVMDVMSXXXXXXXXXXXXXXXXXXXXEVVISPLEGAFEVAKTLQDFVGATERVDELEKIMHSAARGNPRRHLGLQVQLQTVEILRRGGGRGEKGMNWQ 746
            SGS A  GC     + V++   +     A+  S+P      KPQR  PKPS+  S+ S +   P         QQSLEELERG  LTSPFTS A  W +    FE+   PRSP+R +      +S  P+   V A    +  +  +   P    XXXXXXXXXXXXXXXX                   H +VE   P T S                        XXXXXXXXXXX   +P           L   ++   G+    E       T    SP +L+Q++LELALAEDGFL+SP G                             P +  L L  P  + TP++       TPR   +RRLS+P L F  TP          +S+R T G ++LDSIR K A+G++ + T                Y PV++        T + A E+E +D      +LL+QSA RLGLDITGLRKALL+R+LGVEP  XXXXXXXXXXXXXX                                    GVMP GWLR                 H    + G + +   ETY  V+WVLD+ESG+EWRVRKGP E LALHE VS +RP S   +G  FPLKRHK+ET PPS+EKQA+LE+YLRRL  V    S                       +   E  +EVAK LQDF+GATERVDEL  + H+  +G+P+R L  Q+QL T          G     WQ
Sbjct:    3 SGSTAKVGCDG---LAVSDTQREGTIDSASLSSAPDKLVSHKPQR--PKPSSFSSVASGSGNTP-----LTFQQQSLEELERGENLTSPFTSPAGAWTDHAF-FETRPLPRSPLRHSPTTKAGDSQDPTITPVSADSDSAFFEAESGNQPSSSLXXXXXXXXXXXXXXXXGAAVSSPYASISDYAAPAYHGIVECTTPPTRS--------------------FLSAXXXXXXXXXXXSGAVPPF---------LDDFAADFGGVSAEME-------TGKGKSPGSLKQQQLELALAEDGFLSSPGGXXXXXXXXXXXXXXXXXXXXXXP------PPEDLLFLFSPTLVHTPSSRAATPRSTPRHTTRRRLSMPGLPFRATPRSTGSKAPVTASARGT-GILSLDSIRVKLATGLTPRST-------------LSEYVPVHLS------PTLAKAQEQEHVDAPDGEDILLVQSAHRLGLDITGLRKALLVRILGVEPTXXXXXXXXXXXXXXXATLLFGSARKQTIAHTFSGSVSPARPTTKRTRSASAGVMPTGWLR----------RAAGGQSHLGEGRGGKTGKRVSETYQFVLWVLDLESGEEWRVRKGPSEMLALHEAVSAMRPGSLGIDGVKFPLKRHKSETNPPSLEKQARLEEYLRRLTGVSSSHS------MVSSSPPSPLGAAARPAVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRRLRRQIQLPTAS--------GHGAFRWQ 672          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: XP_009033284.1 (hypothetical protein AURANDRAFT_70742 [Aureococcus anophagefferens] >EGB12212.1 hypothetical protein AURANDRAFT_70742 [Aureococcus anophagefferens])

HSP 1 Score: 165.6 bits (418), Expect = 7.700e-37
Identity = 132/431 (30.63%), Postives = 199/431 (46.17%), Query Frame = 0
Query:  575 VVWVLDVESGQEWRVRKGPLEFLALHEVVSMLRPESFWTEGAAFPLKRHK-NETRPPSVEKQAKLEKYLRRLAEVMDVMSXXXXXXXXXXXXXXXXXXXXEVVISPLEGAFEVAKTLQDFVGATERVDELEKIMHSAARGNPRRHLGLQVQLQTVEIL--------------RRGGGRGEKGMNWQGKLDAFVEEANKCDVQK-TDLLKAYSLFLGSVSREILNEAPHGDALRGLVRINLASPTLASGSGEIDETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLD 990
            ++WVLDV +G EWRV +   EF  LHE +  LRP    TE   FP +R    ET     +++ +LE+Y RR++ ++                                 + +VA  LQ F+   +R   LE +       NP   L    Q+   ++L                GG   E G++   K+  +++    C ++   DLL A +L   S                                  I E +++ +  SA+RR +E E F+PL  +L+  +  + D A+E++LA +CA  +  PQ+  GIPV +IS SSWE+A   L  +     TLP DKLD L+AA +E+   YR EH      HLGAD FLP+FIYV+    I  L  L+ +L  L DP + +SE GY +A+ E A++++L LD
Sbjct:  340 ILWVLDVLAGAEWRVPRRFREFFELHEELVALRPS---TEKLDFPTRRPSLYETTHSVNDRRVRLERYARRVSGMLFGARLHAH-------------------------SGDVALALQRFLDVPKRRASLELL-----ERNPDITLRQAAQVAVCQVLALPAFEKILADIVAAAGGHAFESGLDMLAKMKQYIDHLQACLLEGCADLLVAVALRRKSC---------------------------------IAEDDLNAILSSAIRRQIETEIFVPLMDKLHGLLRGDID-AEERRLAARCANARHMPQTALGIPVHHISPSSWESAIYQLSNIGS--YTLPCDKLDALLAAAKEIPQLYRIEHPGTEN-HLGADDFLPIFIYVLVNADIPNLSYLQKVLCTLCDPDKRLSETGYYVATFEAAVQHILELD 700          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: CBJ25693.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 154.5 bits (389), Expect = 1.800e-33
Identity = 132/455 (29.01%), Postives = 205/455 (45.05%), Query Frame = 0
Query:  566 SSEIETYGIVVWVLDVESGQEWRVRKGPLEFLALHEVVSMLRPESFWTEGAAFPLKRHKNETRPPSVEKQAKLEKYLRRLAEVMDVMSXXXXXXXXXXXXXXXXXXXXEVVISPLE-GAFEVAKTLQDFVGATERVDELEKIMHSAARGNPRRHLGLQVQLQTVEILRRGGGRGEKGMNWQGKLDAFVEEANKCD-----VQKTDLLKAYSLFLGSVSREILNEAPHG--DALRGLVRINLASPTLASGSGE----------------------IDETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLDE 991
            SS  +T   +VWV+DVESG EWRVR+   EF  L EV + +RP     +    P      ET      ++ +LE YL+RL  ++                           + PL   +  +A  LQDF+G + RV+ L ++     R  P R L   +Q++  ++ R            +  +  FV E   CD      +KT   +A    L  V   +      G  + LR +VR + ++ T ++G G                        +E E   L   +VRR +EAE F+P+  R+Y ++        EK +       + +PQ++ G+P  NIS S W ++   L+ +   + TLP DKLD L+A   ++ A +R EH       LGAD FLP+FIYV+    +  L +   +L  L DP +MM EAG+C+A+   A+++L R  E
Sbjct:  736 SSAPQTASYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFP--PWLPDVKETAGVVDARRPRLEAYLQRLCSLL--------------------------YMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQ----RSRPERELRQALQVRAWQMFRL--------PPLERAVADFVREI--CDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREMVR-SSSAVTTSAGRGXXXXXXXXXXXXXGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLTEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVG--LFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIYVLVNSRVENLAAQSVILETLCDPKKMMGEAGFCVATFSAALQHLSRQAE 1145          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: OQR89721.1 (hypothetical protein ACHHYP_06095 [Achlya hypogyna])

HSP 1 Score: 97.8 bits (242), Expect = 2.000e-16
Identity = 71/184 (38.59%), Postives = 95/184 (51.63%), Query Frame = 0
Query:  807 SGEIDETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDM-AQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLD 990
            S  +D+  V      AVR  +E    +PL   L+    LE+ + A+E+ L       + +PQSFFGI +  +S+SSW    E L     +  TLP DKL  LV A   VH  ++ EH E AG  L  D FLPVFIYV+ Q  ++  L L   L  L DP +   + GY LAS E A+E+L   D
Sbjct:  564 SPPMDDDVVHEWISDAVRHEVEEWVCVPLLPALW--AGLESAVAAKERVLQAHVTALRPKPQSFFGISLATLSVSSWARPIETLG--DADAMTLPLDKLRKLVEAALLVHIVFQEEH-EGAGA-LSGDDFLPVFIYVIVQSRLAHPLVLLRTLNALSDPEKRRGQNGYYLASFEAALEHLAAPD 741          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: XP_012201432.1 (hypothetical protein SPRG_07260 [Saprolegnia parasitica CBS 223.65] >KDO27983.1 hypothetical protein SPRG_07260 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 97.4 bits (241), Expect = 2.600e-16
Identity = 63/164 (38.41%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  822 AVRRVLEAETFLPLRLRLYDRVMLETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYL 986
            A+R  +E    +P+   L  R+       +   L    AL +++PQSFFGIP+  IS+SSW    E LR +  +  TLP DK   LV A   VH  Y+ EH       L  D FLPVFIYV+ Q  +   ++L   L  L DP + + + GY LAS E A+E+L
Sbjct:  581 AIRHEVEEMVCIPVLPSLLSRLQASVADRERVVLGHMSAL-RAKPQSFFGIPLHRISVSSWVRPIETLRDV--DAMTLPLDKHRRLVEAAMLVHIVYQEEHD--GADVLSGDDFLPVFIYVIVQSRLGTPVALLQALNVLCDPEKRIGQNGYYLASYEAALEHL 739          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: XP_008604150.1 (hypothetical protein SDRG_00451 [Saprolegnia diclina VS20] >EQC42727.1 hypothetical protein SDRG_00451 [Saprolegnia diclina VS20])

HSP 1 Score: 97.1 bits (240), Expect = 3.400e-16
Identity = 63/180 (35.00%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  811 DETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMA-QEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLD 990
            D+  ++     A+R  +E    +P+   L  R  L++ +A +E+ +       +++PQSFFGIP+  +S+SSW    E LR +  +  TLP DK   LV A   VH  Y+ EH       L  D FLPVF+YV+ Q  ++  + L   L  L DP + + + GY LAS E A+E+L   D
Sbjct:  522 DDDVLNEWISDAIRHEVEEMVCIPVLTPLLSR--LQSSVADRERVIVGHMNALRAKPQSFFGIPLHRLSVSSWARPIETLRDI--DAMTLPLDKHRRLVEAAMLVHIVYQEEHD--GADVLSGDDFLPVFMYVIVQSRLAHPVVLLQALNVLCDPEKRIGQNGYYLASYEAALEHLASPD 695          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: OQR86442.1 (hypothetical protein ACHHYP_10540 [Achlya hypogyna])

HSP 1 Score: 94.0 bits (232), Expect = 2.900e-15
Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 0
Query:  827 LEAETFLPLRLRLYDRVM--LETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYL 986
            +E  TF+PL+  ++  +M  L    A       + +   ++PQ+FF I  ++IS S W   TE L  L   V  LPS++   LV A + ++A YR EH   A  HL AD FLP+FIYV+ Q  +   L  + +L      S M+ E GY    LE A+E++
Sbjct:  436 IERATFVPLQGTMHSLLMQSLADGEATLHAFEARRSWLAAKPQAFFEIHDKHISPSDWRACTEQLNALDNYV--LPSEQGRALVEAAKSIYAVYRAEHAAAAAGHLAADDFLPIFIYVLCQSRLRHTLLTRRILSETTISSIMLGEIGYYTTMLEAAVEFV 594          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: KUF99002.1 (hypothetical protein AM588_10010748 [Phytophthora nicotianae])

HSP 1 Score: 93.6 bits (231), Expect = 3.700e-15
Identity = 61/215 (28.37%), Postives = 101/215 (46.98%), Query Frame = 0
Query:  811 DETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHG--------------EVAGLH----------------------LGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLD 990
            ++ ++ +L   A+R  LE    +PL   L  + +      +E+Q  ++    K +PQS+FGIP++ IS+SSW +  + ++ + G    LP DK+  LVA   ++HA Y+ E                 +AG                        L  D FLP+FIYV+    +   +  + LL  L DP +  SE+GY LA+ E A+ ++L L+
Sbjct:  485 NQDKLQQLLSDAIRHELEDRICVPLMWDL-TQYLRRHVQHEERQFRQRVFQLKGKPQSYFGIPMDKISLSSWRSVVDVIKEIDG--AFLPLDKMRKLVATAHQIHALYKAERSMYLERPHHRRQRSTPMAGAQEQKIEEDARKSDASIKTQEEDVLSGDDFLPIFIYVIVHSDLEAPILTQVLLNRLCDPEKRRSESGYYLATFEAALHHILSLE 696          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: XP_008618627.1 (hypothetical protein SDRG_14286 [Saprolegnia diclina VS20] >EQC28014.1 hypothetical protein SDRG_14286 [Saprolegnia diclina VS20])

HSP 1 Score: 92.4 bits (228), Expect = 8.300e-15
Identity = 62/164 (37.80%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  825 RVLEAETFLPLRLRLYDRVMLET---DMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYL 986
            R +E  TFLPL   LY  + L     D A  +  +R+  L   +PQSFF I   +IS S+W   T+ L  L   V  LPS+K   LV A + ++A +  EH  V   HL AD FLP+FIYV+ Q  ++ L   + +L      S M+ E GY    LE A+E++
Sbjct:  505 RCIERVTFLPLHDLLYSMLQLSLAGGDAALAEFESRRRWL-AEKPQSFFDIRPAHISPSNWGACTDKLNALDEHV--LPSEKGLALVEAAKSIYAVFHAEHTSVNVEHLAADDFLPIFIYVLCQSSLTELPLTRRVLSETTISSIMIGEIGYYTTMLEAAVEFV 665          
BLAST of NO02G04260 vs. NCBI_GenBank
Match: OEU21234.1 (hypothetical protein FRACYDRAFT_234859 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 89.7 bits (221), Expect = 5.400e-14
Identity = 64/184 (34.78%), Postives = 97/184 (52.72%), Query Frame = 0
Query:  810 IDETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMAQEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLPSDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISRLLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLDETAE 994
            +DE+  DRL    +R  +E E ++ LR  +  R+++     ++ +  RK      RPQ  F I  + IS S W++    L++  G ++TLP  KL  +V A RE+   Y REHGE A   L A+ FLP+FI+ V +  + R  +L  LL  L D    + E GY L S E AI ++  +D T +
Sbjct: 1043 VDESYWDRLVREGIREQVEIEVYVSLR-SVVSRLLVNGWRHEDMEELRK------RPQGMFRI--DKISPSHWQSVARILKQGVG-MSTLPCVKLRAIVDAAREISQLYEREHGEQA--LLDANQFLPIFIFCVVRAEMERPCALCFLLQKLCDRINRIGEIGYFLTSFEAAIAHIQEIDLTED 1214          
The following BLAST results are available for this feature:
BLAST of NO02G04260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30217.15.300e-6236.77hypothetical protein Naga_100003g51 [Nannochlorops... [more]
XP_009033284.17.700e-3730.63hypothetical protein AURANDRAFT_70742 [Aureococcus... [more]
CBJ25693.11.800e-3329.01conserved unknown protein [Ectocarpus siliculosus][more]
OQR89721.12.000e-1638.59hypothetical protein ACHHYP_06095 [Achlya hypogyna... [more]
XP_012201432.12.600e-1638.41hypothetical protein SPRG_07260 [Saprolegnia paras... [more]
XP_008604150.13.400e-1635.00hypothetical protein SDRG_00451 [Saprolegnia dicli... [more]
OQR86442.12.900e-1535.40hypothetical protein ACHHYP_10540 [Achlya hypogyna... [more]
KUF99002.13.700e-1528.37hypothetical protein AM588_10010748 [Phytophthora ... [more]
XP_008618627.18.300e-1537.80hypothetical protein SDRG_14286 [Saprolegnia dicli... [more]
OEU21234.15.400e-1434.78hypothetical protein FRACYDRAFT_234859 [Fragilario... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007087NSK007087Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04260.1NO02G04260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575032gene_1015Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g51gene415Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04260.1NO02G04260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04260 ID=NO02G04260|Name=NO02G04260|organism=Nannochloropsis oceanica|type=gene|length=2988bp
ATGGGGTTCGACAAACACGATCACAGCGGTAGCGCTGCAGCTGGATGTCC
CGCATCTGTACCCGTCTGTGTGGCCGAAGTGACGATGGACGTGCTGTCTC
CTCGCGCCACTAGCCCTAGCTCTCCTCCAAAACCCCAGAGGGCCAAGCCC
AAGCCCTCCACCCTTCAGAGTCTGGTCTCCGCAAACGCGCCTCAACCACC
ACACACGCCTTCCTCACCTTTGCTACAGCAATCATTGGAGGAGCTAGAAA
GAGGCAGCACCTTGACGAGTCCATTCACGTCGACCGCGAGGCCTTGGGGC
GAGAAAGGCCTCCCGTTCGAAAGCCACTGTCATCCGCGTTCCCCGGTCCG
GCTCGCTGGTATTGCCAATGTAGAAGAGTCGGCACCATCAAAATTTTTGG
TTGAGGCGGCGCCATTGGTTTCCAAACTGGATCTTTCGACAGCCGAAACC
CCGGAGTCGTCTTCCTCCTCTTCCTCCTCCTCCTCCTTCTCCTCTTCTTC
TTCTTTTTCTCCTTCACCGTTGATGCACTCACCTTGTTCCAAGCTACCTT
GTTCCATAACAGCCTTGCAACATTCGCTTGTGGAGTCCGCTTTCCCGTCA
ACGGCTTCGACAAGTCTGCTCACTAAGTGCAACATAACCACCACCACTGC
TAATACTTCCACCACCACAACCATCATCACCAGCAGCAGCAGCAGCCACA
ACAACAGCATAAGTGCAGTCGCTATACCGAGCATCTTCCCCGCTTCCTCT
TCCTCTGCCCCGCTCTCCGCTTCCTCTTCTCTGCTTCATGGCATCCACCT
GACCGCGGAAGAGCTCCCACCATTACCTGGCACTCCAACAGACGTCAGCC
CGGCAACCCTGCGTCAAAAGGAGCTCGAGCTCGCCCTCGCCGAAGACGGC
TTTTTGACCTCCCCCTCTGGAAGTAGCAGTGGGGAAGAAGAGGGCTCACC
CGTCGACAGCGATGGTGCTGGCACCTCTCCCACCTCCAGCGCAACCTGTA
CTTTAAGGCCTGATGACCAGCCTCTCCACCTAGTGGATCCTCCTGCGTTG
TTCACACCCACCACCATCACTCCACGTCCTCATGCCAAACGCCGCCTCTC
CCTTCCCAGCCTCGCATTTACGCCCAGCAGCAGCCGTAATACCGGGGGTG
CTATGACGCTAGACTCAATTCGTGCCAAATTTGCGAGTGGTGTAAGTGGA
AAGAGGACGACCCTTCGAGGAGGAGGGGGAGGAGGAGGAGGAAGCACCGC
TGGAGCCTACACTCCTGTGAACGTCGACTCTGGTGCTCTTGGTGTTGCCA
CTCCCTCAGCTGCGGCCGAAGAAGAGGAGATTGATCGGGCGGGGTTATTG
CTCATCCAGTCTGCAAGGCGGTTAGGATTAGATATCACCGGTTTGAGGAA
AGCGTTGCTGATTCGTGTTTTAGGCGTCGAGCCCGTTGCAGCCCGCCCTC
CCTCTCCTCCTCCTCCCTCCATGGTGTTGTTTGGTGCTGCTGCTAGCAGC
AGCAGTAGTAACAGCAGCAGCAGCGGCAGCAGCAGCAGCAGTAGCTGTAG
CGGGATGACGACGTCGAAGCGCAACCGTAGCGCTTCTGTCGGTGTCATGC
CCGTTGGCTGGCTCAGACGGAATAGCAGCAGAAACAACGATAACAAGAAG
AGTGATAAAGGTAGCAACCATGAAGCTCGAAGGAAAAACGGGACTAGCAG
TGAGATTGAGACGTATGGGATTGTTGTGTGGGTTTTGGACGTGGAAAGTG
GGCAGGAGTGGAGGGTTAGAAAGGGGCCGCTGGAGTTCTTGGCATTACAT
GAGGTGGTTTCTATGTTGAGACCTGAGAGCTTTTGGACGGAAGGAGCGGC
CTTTCCCTTGAAAAGACACAAGAACGAGACGAGACCACCGAGTGTGGAGA
AGCAGGCGAAACTTGAGAAATATTTGAGGCGGTTGGCCGAGGTGATGGAT
GTGATGTCCTCTGGGGTTGCGTCGTCCTCCTCTTCCTCGTCCTCAGGAGC
AGGAGGAGATAGGAGAGCAGAGGTGGTGATATCTCCACTTGAGGGTGCAT
TTGAAGTGGCCAAGACATTGCAAGATTTTGTGGGGGCGACGGAGAGGGTG
GATGAGTTGGAGAAGATAATGCATTCGGCAGCAAGGGGGAATCCGAGGAG
GCACTTAGGGCTTCAGGTCCAACTGCAGACTGTCGAGATTTTGCGCAGGG
GTGGTGGAAGAGGAGAAAAAGGGATGAATTGGCAAGGGAAGTTGGATGCG
TTTGTGGAGGAGGCGAATAAATGTGATGTGCAGAAGACAGACCTGTTGAA
GGCTTATTCTCTTTTTCTTGGGAGCGTTTCAAGGGAGATACTTAATGAAG
CCCCGCATGGTGATGCGTTGAGAGGTTTGGTCAGAATAAATCTGGCTTCG
CCCACGTTGGCTAGTGGCAGTGGAGAGATTGACGAGACGGAGGTGGATCG
GTTGTGTTTATCGGCTGTGAGAAGGGTGTTGGAAGCCGAGACGTTTTTGC
CCCTGCGTTTGCGGCTGTATGACAGGGTGATGCTCGAGACGGACATGGCG
CAAGAGAAGCAGTTGGCCCGGAAATGCGCCCTTTTCAAATCACGGCCTCA
ATCATTTTTTGGTATCCCTGTAGAGAATATTTCAATTTCGTCGTGGGAGA
CAGCGACGGAGCACCTCCGCCGCTTGAGTGGGGAGGTGACGACCTTGCCG
TCGGATAAGCTGGACACACTGGTGGCGGCGGTTCGGGAGGTACATGCATG
TTACCGAAGGGAGCATGGGGAAGTGGCAGGGTTGCATTTGGGGGCGGATA
TGTTCCTCCCGGTGTTTATTTATGTGGTGAGCCAGTGTGGGATCTCGCGG
TTGTTGAGCCTGAAGAATCTGTTGGGAGGCTTGGTTGATCCGAGTCGGAT
GATGTCGGAGGCGGGGTATTGCTTGGCATCGTTGGAAGGGGCGATTGAGT
ATTTGTTGCGGTTGGATGAGACGGCGGAAGAGATTTAG
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protein sequence of NO02G04260.1

>NO02G04260.1-protein ID=NO02G04260.1-protein|Name=NO02G04260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=996bp
MGFDKHDHSGSAAAGCPASVPVCVAEVTMDVLSPRATSPSSPPKPQRAKP
KPSTLQSLVSANAPQPPHTPSSPLLQQSLEELERGSTLTSPFTSTARPWG
EKGLPFESHCHPRSPVRLAGIANVEESAPSKFLVEAAPLVSKLDLSTAET
PESSSSSSSSSSFSSSSSFSPSPLMHSPCSKLPCSITALQHSLVESAFPS
TASTSLLTKCNITTTTANTSTTTTIITSSSSSHNNSISAVAIPSIFPASS
SSAPLSASSSLLHGIHLTAEELPPLPGTPTDVSPATLRQKELELALAEDG
FLTSPSGSSSGEEEGSPVDSDGAGTSPTSSATCTLRPDDQPLHLVDPPAL
FTPTTITPRPHAKRRLSLPSLAFTPSSSRNTGGAMTLDSIRAKFASGVSG
KRTTLRGGGGGGGGSTAGAYTPVNVDSGALGVATPSAAAEEEEIDRAGLL
LIQSARRLGLDITGLRKALLIRVLGVEPVAARPPSPPPPSMVLFGAAASS
SSSNSSSSGSSSSSSCSGMTTSKRNRSASVGVMPVGWLRRNSSRNNDNKK
SDKGSNHEARRKNGTSSEIETYGIVVWVLDVESGQEWRVRKGPLEFLALH
EVVSMLRPESFWTEGAAFPLKRHKNETRPPSVEKQAKLEKYLRRLAEVMD
VMSSGVASSSSSSSSGAGGDRRAEVVISPLEGAFEVAKTLQDFVGATERV
DELEKIMHSAARGNPRRHLGLQVQLQTVEILRRGGGRGEKGMNWQGKLDA
FVEEANKCDVQKTDLLKAYSLFLGSVSREILNEAPHGDALRGLVRINLAS
PTLASGSGEIDETEVDRLCLSAVRRVLEAETFLPLRLRLYDRVMLETDMA
QEKQLARKCALFKSRPQSFFGIPVENISISSWETATEHLRRLSGEVTTLP
SDKLDTLVAAVREVHACYRREHGEVAGLHLGADMFLPVFIYVVSQCGISR
LLSLKNLLGGLVDPSRMMSEAGYCLASLEGAIEYLLRLDETAEEI*
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Synonyms
Publications