NO02G04130, NO02G04130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04130 vs. NCBI_GenBank
Match: EWM30351.1 (cyclin h [Nannochloropsis gaditana]) HSP 1 Score: 498.0 bits (1281), Expect = 2.600e-137 Identity = 277/375 (73.87%), Postives = 303/375 (80.80%), Query Frame = 0 Query: 1 MFDWTQGTQSRAWLFKSAEELAELRAKAHQLAKEGIREGRGVPMPRSFASRL---------SXXXXXXXXXXXXXXXXXXXXHPTTTAGVKRPRPNEE----DNKFKADDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENVNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLLVCAVDLGMVEPVESYLSYCFEEEDEYASIMNEVALIRPAVEKARHDVPKTLEERKQSRMETWKEAMAGLKKAARWGTKGEGK 363 MFDWTQGTQ RAWL++SAEELA LRAKAH LAK+ I EG+ VPMP +ASRL S XXXXXXXXXXXXXXXXX P +G+KRPRP+ E D A K EL+AL P DEEALLQYF YMIQD+CGHRSESIKRGL VQATALTFF RFFLSNSMLDFDPKVVLMAC+FLAGKVEY+YIRLSELKDVFGEKYGR IIEFEG LLQGLGFCLK YHPYNPFFGL+NGLE VNHVKKLGLT LSR+ AGQETIDL+LPTDLPLLH PARIALAVL+ CA + ++EPV YLSYCFEEEDEY +IM EVALIRPAVE A+ +VPK+ ERK+SR+E W+ AM LKKAARWG KGEGK Sbjct: 16 MFDWTQGTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTXXXXXXXXXXXXXXXXXKPKLVSGIKRPRPDGEEETQDGLCLASAKDGQMRELDALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKKAARWGGKGEGK 390
BLAST of NO02G04130 vs. NCBI_GenBank
Match: GAX18757.1 (cyclin H [Fistulifera solaris]) HSP 1 Score: 114.0 bits (284), Expect = 1.100e-21 Identity = 102/386 (26.42%), Postives = 162/386 (41.97%), Query Frame = 0 Query: 1 MFDWTQGTQSRAWLFKSAEELAELRAKAHQLAKEGI----REGRGVPMPRSFASRLSXXXXXXXXXXXXXXXXXXXXHPTTTAGVKRPRPNEEDNKFKADDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKD----VFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENV------------NHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLLVCAVDLGMVE-PVESYLSYCFEEEDEYASIMNEVALIRPAVEKARHDVPKTLEERKQSRMETWKEAMAGLKKAARWGT---KGEGK 363 M D+ +Q W+F S EL R A++ A+E I P P FA+ E DD +P LT +E L+ ++ + + + G + I+R + ATA F RFFLSNS+L +DPKVV++A FLA KVE + + +L++ + II E +LL+GL F L+ +HPY L L N+ ++ DL IY + +D + +D+PLL+ P ++ LA L++ ++ + YL F E++ VA++ P ++ D+ LE++ + + T K LKK WG+ KGE K Sbjct: 1 MVDYENSSQLHKWMFSSPHELQRCRTHANRQAREYITAQTETSNNTPTPSYFAA--------------------------------------EWKNHSLDDNNLPNEHEHFLTADEETTLVHFYAHKLPNLIGPHALRIRRESKITATAALFLRRFFLSNSVLLYDPKVVMVAAAFLASKVEDATVDIRQLEEGTEAMNAPVPTSDIITTEVALLEGLHFDLRCFHPYKAVVALTEDLRTFLKTKVGQALFVRNNNNNSMISGQDLIPIYERARTLVDHAVLSDIPLLYAPGQVGLAALMLAQQQQTELQMDLLGYLKVRFPEQN--------VAVLEPILQHL-CDMLSQLEQQPEDDLSTLKAIHKKLKKVRVWGSKNNKGESK 339
BLAST of NO02G04130 vs. NCBI_GenBank
Match: CBN77757.1 (cyclin H [Ectocarpus siliculosus]) HSP 1 Score: 111.3 bits (277), Expect = 6.900e-21 Identity = 84/287 (29.27%), Postives = 127/287 (44.25%), Query Frame = 0 Query: 3 DWTQGTQSRAWLFKSAEELAELRAKAHQLAKEGIREG------RGVPMPRSFASRLSXXXXXXXXXXXXXXXXXXXXHPTTTAGVKRPRPNEEDNKFKADDKGVPTAELEALTPGDEEALLQ-YFGYMIQDSCGHRS--ESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENVNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLL 281 ++ T R WLF L E++ + +LA E G R + RS A S P T + E L +EE L++ Y+ IQ++CG S E ++R VQATA+ +F+RF+LSNS+L+ DPK++++ C+FLA K E ++ L G I+ E +LLQGL F L +HPY LV G + + + ++ + +D ++ TDLP LH P+R+ALA LL Sbjct: 2 EFNSSTHRRHWLFTKG-TLREVQEETAKLAAEACAAGTPPEGSRSFAVTRSTAGDKSGGRATTDNEEGTLDVKGEGGVPATXXXXXXXXXXXXXXXXXXXXXXXXXSSAEPLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAIAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLD-DLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVVTDLPFLHPPSRLALAALL 286
BLAST of NO02G04130 vs. NCBI_GenBank
Match: GAX23989.1 (cyclin H [Fistulifera solaris]) HSP 1 Score: 107.5 bits (267), Expect = 9.900e-20 Identity = 83/290 (28.62%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 96 DDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKD----VFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENV-------------NHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLLVCAVDLGMVE-PVESYLSYCFEEEDEYASIMNEVALIRPAVEKARHDVPKTLEERKQSRMETWKEAMAGLKKAARWG-----TKGEGK 363 DD +PT LT +E L+ ++ + + + G + I+R + ATA F RFFLSNS++ +DPKVV++A FLA KVE + + +L++ + II E +LLQGL F L+ +HPY L L N ++ DL IY + +D ++ +D+PLL+ P ++ +A L++ ++ + YL F E++ VA++ P ++ ++ LE++ + + T K LKK WG KGE K Sbjct: 37 DDNNLPTEHEYFLTADEETTLVNFYAHKLPNLIGPHALRIRRESKITATAALFLRRFFLSNSVMLYDPKVVMVAAAFLASKVEDATVDIRQLEEGTEAMNAPVPTSDIITTEVALLQGLHFDLRCFHPYKAVVALTEDLRTFLKTKVGQALFVRNNSSNSSMISGQDLIPIYERARTLVDHVVLSDIPLLYAPGQVGMAALMLAQQQQNDLQMDLLGYLKVRFPEQN--------VAVLEPVLQHL-CEMLSELEQQPEDDLSTLKAIHKKLKKVRVWGNSTKNNKGESK 317
BLAST of NO02G04130 vs. NCBI_GenBank
Match: XP_008607357.1 (hypothetical protein SDRG_03502 [Saprolegnia diclina VS20] >EQC39296.1 hypothetical protein SDRG_03502 [Saprolegnia diclina VS20]) HSP 1 Score: 101.3 bits (251), Expect = 7.100e-18 Identity = 75/259 (28.96%), Postives = 127/259 (49.03%), Query Frame = 0 Query: 96 DDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENVNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLLVCAVDLGMVEPVESYLSYCFEEEDEYASIMNEVALIRPAVEKARHDV---PKTLEERKQSRMETWKEAMAGLKK 352 ++ VP EL LT +E +L ++ +QDSC + + V++ A+ F RF+LSNS+++F PK + +++AGKVE YI + + + + +I E +L+G F L YHP+ G ++ + + + L L ++A+ I+ L+ TD PLL+ PA +ALA + L + E+Y S C DEY + + P+ A H+V K L+E + + +E + A KK Sbjct: 74 EELDVPPNELALLTLAEEALVLNFYQIQVQDSC---TRLFRTSDKVKSAAVVLFKRFYLSNSVMEFHPKYIAPTVIYVAGKVEEQYISVDSISEQLQVDVNQ-VIAHEMVVLEGARFQLIMYHPFRALTGFIDDIRAFYKSRGVDLKIPTLQSLHASATACINDLILTDAPLLYAPACLALA-----GLQLTVESAPETYASICM---DEYL-VQCKRGQQHPSEVAAIHNVLAHVKQLKEARDAVVEDQAQVKAVYKK 319
BLAST of NO02G04130 vs. NCBI_GenBank
Match: ORZ25671.1 (cyclin-like protein [Absidia repens]) HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17 Identity = 66/227 (29.07%), Postives = 111/227 (48.90%), Query Frame = 0 Query: 77 TTAGVKRPRPNEEDNKFKADDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLENVNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVLLVCAVDLGMVEPVESYLSYCFEEE 304 T A ++R R N E+++ A++ P E+ LT ++ L +Y+ IQ C H +K V ATA+ + RFFL N+M+D+ PK +L C+F+A K E + + + E ++ E + QGL F +HPY P +G +++ + L L Y I +L TDLPL++ P+++A+A ++ G + YL F++E Sbjct: 33 TEAAIERVRKNIEEDRKAANE---PMDEINFLTADEQVKLCRYYEGQIQAICPH----LKLSDMVMATAVIYMKRFFLRNTMMDYHPKDILFTCLFMATKSESERMSIDEFGKNLQLPTTDMVLALEFPVSQGLKFEYMVHHPYRPAYGYYLDIQHSGDPVDMSL----LRDTYGQVNGVIKKILLTDLPLIYQPSQLAIAAFIIAGKHNGFDLRIRRYLEQRFDKE 248
BLAST of NO02G04130 vs. NCBI_GenBank
Match: XP_024572549.1 (cyclin h-1 [Plasmopara halstedii] >CEG36180.1 cyclin h-1 [Plasmopara halstedii]) HSP 1 Score: 99.8 bits (247), Expect = 2.100e-17 Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = 0 Query: 102 TAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLEN-VNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVL 280 T LE L PG E L Q++ +Q+SC ++ ++ V+ A+ F RF+LSNS+++F PK ++ +++AGKVE Y+ + + D + + II E LL+G+ F L YHP+ G ++ K L A L +++A I+ +L TDLP+L+ P+ +ALA L Sbjct: 98 TPLLEFLDPGQEAVLRQFYEEKLQESCS--AQFLRTSDKVKCCAMLLFKRFYLSNSVMEFHPKYLVPTAIYVAGKVEEQYMSVDTIADQLHVNH-KFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQALKKDLPATVLQKLHANSSAMINDILLTDLPILYYPSFLALAAL 273
BLAST of NO02G04130 vs. NCBI_GenBank
Match: XP_002908860.1 (cyclin-H, putative [Phytophthora infestans T30-4] >EEY57674.1 cyclin-H, putative [Phytophthora infestans T30-4]) HSP 1 Score: 99.4 bits (246), Expect = 2.700e-17 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0 Query: 102 TAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLEN-VNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVL 280 T LE L P E L ++ IQ+SC ++ ++ V+ A+ F RF+LSNS+++F PK ++ +++AGKVE Y+ + + D + + II E LL+G+ F L YHP+ G ++ V K L A L +++A ++ +L TDLPLLH P+ +ALA L Sbjct: 98 TPLLEFLNPEQEALLRAFYEEKIQESCS--AQFLRTSDKVKCCAVLLFKRFYLSNSVMEFHPKFIVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMVLLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLKKDLPATVLQKLHAISTAMVNDMLLTDLPLLHYPSYLALAAL 273
BLAST of NO02G04130 vs. NCBI_GenBank
Match: XP_009529817.1 (hypothetical protein PHYSODRAFT_346765 [Phytophthora sojae] >EGZ16068.1 hypothetical protein PHYSODRAFT_346765 [Phytophthora sojae]) HSP 1 Score: 99.0 bits (245), Expect = 3.500e-17 Identity = 79/276 (28.62%), Postives = 125/276 (45.29%), Query Frame = 0 Query: 8 TQSRAWLFKSAEELAELRAKAHQLAKEGI---REGRGVPMPRSFASRLSXXXXXXXXXXXXXXXXXXXXHPTTTAGVKRPRPNEEDNKFKADDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLEN-VNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVL 280 T W+F + EELA +R H K + RE P + +SR + + + EE + T LE L+P E L ++ IQ+SC ++ ++ V+ A+ F RF+LSNS+++F PK ++ +++AGKVE Y+ + + D + + II E LL+G+ F L YHP+ G ++ V K L A L +++A ++ LL TDLPLLH P+ +ALA L Sbjct: 8 THFNNWVF-TTEELARVRRLQHVKTKRALRLEREEAQKPEASAASSRKARSFAALVPRSSTAVRDAFDWNDEVDVDLATQEEAEEKANLQL------TPLLEFLSPDQEALLRAFYEEKIQESCS--AQFLRTSDKVKCCAMLLFKRFYLSNSVMEFHPKYLVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLKKDLAATVLQKLHANSTALLNDLLLTDLPLLHYPSYLALAAL 273
BLAST of NO02G04130 vs. NCBI_GenBank
Match: XP_008904695.1 (hypothetical protein PPTG_10932 [Phytophthora parasitica INRA-310] >ETI47916.1 hypothetical protein F443_07960 [Phytophthora parasitica P1569] >ETK87845.1 hypothetical protein L915_07788 [Phytophthora parasitica] >ETL41264.1 hypothetical protein L916_07718 [Phytophthora parasitica] >ETL94465.1 hypothetical protein L917_07603 [Phytophthora parasitica] >ETM47697.1 hypothetical protein L914_07682 [Phytophthora parasitica] >ETN10258.1 hypothetical protein PPTG_10932 [Phytophthora parasitica INRA-310] >ETO76633.1 hypothetical protein F444_08005 [Phytophthora parasitica P1976] >ETP17713.1 hypothetical protein F441_07931 [Phytophthora parasitica CJ01A1] >ETP45778.1 hypothetical protein F442_07899 [Phytophthora parasitica P10297]) HSP 1 Score: 98.6 bits (244), Expect = 4.600e-17 Identity = 80/276 (28.99%), Postives = 125/276 (45.29%), Query Frame = 0 Query: 8 TQSRAWLFKSAEELAELRAKAHQLAKEGI---REGRGVPMPRSFASRLSXXXXXXXXXXXXXXXXXXXXHPTTTAGVKRPRPNEEDNKFKADDKGVPTAELEALTPGDEEALLQYFGYMIQDSCGHRSESIKRGLSVQATALTFFYRFFLSNSMLDFDPKVVLMACMFLAGKVEYDYIRLSELKDVFGEKYGRHIIEFEGSLLQGLGFCLKTYHPYNPFFGLVNGLEN-VNHVKKLGLTAADLSRIYAAGQETIDLLLPTDLPLLHTPARIALAVL 280 T W+F SAEELA +R H K + RE P + +SR + + + EE + T LE L P E L ++ IQ+SC ++ ++ V+ A+ F RF+LSNS+++F PK ++ +++AGKVE Y+ + + D + + II E LL+G+ F L YHP+ G ++ V K L A L +++A ++ +L TDLPLLH P+ +ALA L Sbjct: 8 THFNNWVF-SAEELARVRRLQHVKTKRALRLEREEAQKPEASAGSSRKARSFAGLVPRSSTAVRDTFDWNDEVDVDLSALEEAEEKANLQL------TPLLEFLNPEQETLLRVFYEEKIQESCS--AQFLRTSDKVKCCAMMLFKRFYLSNSVMEFHPKYLVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMILLEGVRFQLIMYHPFRTLLGFLDDFRAFAKQVLKKDLPATVLQKLHANSTAMLNDMLLTDLPLLHYPSYLALAAL 273 The following BLAST results are available for this feature:
BLAST of NO02G04130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04130 ID=NO02G04130|Name=NO02G04130|organism=Nannochloropsis oceanica|type=gene|length=1646bpback to top protein sequence of NO02G04130.1 >NO02G04130.1-protein ID=NO02G04130.1-protein|Name=NO02G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bpback to top Synonyms
Publications
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