NO02G03890, NO02G03890 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G03890
Unique Name	NO02G03890
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4690
Alignment location	chr2:1063548..1068237 +

Link to JBrowse

Properties


Property Name	Value
Description	High mobility group protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1063548..1068237 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036910	HMG_box_dom_sf
IPR009071	HMG_box_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Homology

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: EWM30285.1 (high mobility group protein [Nannochloropsis gaditana] >EWM30286.1 high mobility group protein [Nannochloropsis gaditana])

HSP 1 Score: 231.9 bits (590), Expect = 8.300e-57
Identity = 275/768 (35.81%), Postives = 335/768 (43.62%), Query Frame = 0

Query:  157 KRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENWQEDVGRKAXXXXXXXXXXXXXXXXXXXXXXXXXLREGQEGLDEMELRVSEEGITTTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSLLTEYLSAAQESFKLYDNFTRGIQAESASAAALSFHKMEDDSCNASSSCSSAYQDMLLPV-SIPAGRKSPVLSRASSVSAPSLDAGFTTAGKGEEALDHLQYRQGSSKREHSSKISPWLIPMLSRSPVGSPLHSPGELSVSSTSSFADSH-----HSGPNGGQGNGSESEGQR----------FKLRAAQEMLGQDRPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLGLPPSTPSSPPYLPSSFLPAPLDIVSMSRQTASLPADGK---NNYDLCSRSSSCPPH---NPQHPPSNVVTTVAPGEGVSQTTYLPLMTEWPPTASSL 903
            +RKAALKKAPGAPKRFKSPYILFSIECRE+IKRQLP QAKVTEIMSKIAETWR L+                    EMS YQGPLKVPRVRPRR P+QPKRATSAFMQF RSVK ++R +H EMSN++I KMLTE+W+ ASKE+KLPFLEKERE+RA+YK AME WQ++ GR A                            G EG ++  +   E+GITTT                                                                                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              DDS L +YL+AA  SF +YDNF RGI+ E+A+A A+S  ++   S  ASSS S+  Q+    V S P G  S   S   S ++    +G      G+   DH        K+E  S +  +     +RSP  SP+ S G LS SS +S  +SH      S      G G  + G++          F    A   +  +                                                                                    ++LGL P+TP S    PS   P P+ +V   R ++S            D+  ++     H   +P HPP  VVTT  P  GV QTTY  L  EWPP++SSL
Sbjct:    4 QRKAALKKAPGAPKRFKSPYILFSIECREAIKRQLPSQAKVTEIMSKIAETWRKLSEXXXXXXXXXXXXXXXXXXXEMSRYQGPLKVPRVRPRRYPDQPKRATSAFMQFVRSVKARVRQQHPEMSNSEIMKMLTEQWRSASKEDKLPFLEKEREERAIYKTAMEQWQKETGRVADDASHAPEEGRAMSMLP---------SPGTEGREKASM--PEQGITTTV--------------------------------------SIRSTKAKARVPPPPVTDGHWPSSRSDALPACEPVFPERHEHAPAAQPAPSICSQTGLGLPTLKAQHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHQWEREGQVAEYEDDSFLMDYLNAAHASFAIYDNFMRGIETEAAAALAISSQRVSSVSAYASSSGSTRGQNETTRVASKPPGSSSSFASGDLSRNSNEWISG------GDSWKDH---TSSPLKQEPGSDVKGF---RSARSPATSPVDSCGALSDSSAASALESHGSCRFRSRDEASVGGGWPARGKKGPDEAHHSSSFPAIGAASSVSGESSVAGDDVARKPQMALATGRLSTSALQTSKPCGREDIPLPQIAPHPPVDLGKRAVSPESGSPLFNRPRQGDQLSRPLESAARGHHILGLLPATPCS----PSKCAPLPVAVVEAVRPSSSAERHSSPFLQKLDVEGKAIESQGHENEHPHHPPMLVVTTATPEGGVRQTTYQRLPAEWPPSSSSL 706

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: XP_008618015.1 (hypothetical protein SDRG_13697 [Saprolegnia diclina VS20] >EQC28618.1 hypothetical protein SDRG_13697 [Saprolegnia diclina VS20])

HSP 1 Score: 179.1 bits (453), Expect = 6.400e-41
Identity = 88/176 (50.00%), Postives = 128/176 (72.73%), Query Frame = 0

Query:  150 PVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENWQED 326
            PVV +  K++   KKAPGAPKR KSPYILFS++ RE IK  +PP +KVT++M  IA+ W  ++ EE+  W+  AE D+QRY+ EM++Y GPL+VP  R +++P  PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+K +K PF+EKE+EDRA YK+ ME W  +
Sbjct:   16 PVVNK--KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWNSN 189

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: XP_012203441.1 (hypothetical protein SPRG_08822 [Saprolegnia parasitica CBS 223.65] >KDO25880.1 hypothetical protein SPRG_08822 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 179.1 bits (453), Expect = 6.400e-41
Identity = 88/176 (50.00%), Postives = 128/176 (72.73%), Query Frame = 0

Query:  150 PVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENWQED 326
            PVV +  K++   KKAPGAPKR KSPYILFS++ RE IK  +PP +KVT++M  IA+ W  ++ EE+  W+  AE D+QRY+ EM++Y GPL+VP  R +++P  PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+K +K PF+EKE+EDRA YK+ ME W  +
Sbjct:   16 PVVNK--KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWNSN 189

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: OQR97092.1 (hypothetical protein ACHHYP_12750 [Achlya hypogyna])

HSP 1 Score: 179.1 bits (453), Expect = 6.400e-41
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 0

Query:  145 VASKTPVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENWQEDVGRKA 331
            V  + PVV +  K++   KKAPGAPKR KSPYILFS++ RE IK  +PP +KVT++M  IA+ W  ++ EE+  W+  AE D+QRY+ EM++Y GPL+VP  R +++P  PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+K +K PF+EKE+EDRA YK+ ME W    G KA
Sbjct:   10 VWGEMPVVNK--KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWN---GNKA 190

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: OQS00320.1 (hypothetical protein THRCLA_06027 [Thraustotheca clavata])

HSP 1 Score: 179.1 bits (453), Expect = 6.400e-41
Identity = 91/188 (48.40%), Postives = 133/188 (70.74%), Query Frame = 0

Query:  139 SSHKST-VASKTPVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENWQED 326
            S H +T V  + P V +  K++   KKAPGAPKR KSPYILFS++ RE IK  +PP +KVT++M  IAE W  ++ +E+  W+  AE D+QRY+ EM++Y GPL+VP  R +++P  PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+K +K PF+EKE+EDRA YK+ ME W  +
Sbjct:    3 SPHSATEVWGEIPTVNK--KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWNSN 188

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: CCA15692.1 (high mobility group protein putative [Albugo laibachii Nc14])

HSP 1 Score: 178.7 bits (452), Expect = 8.300e-41
Identity = 88/178 (49.44%), Postives = 127/178 (71.35%), Query Frame = 0

Query:  145 VASKTPVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENW 323
            VA   P+  +  KRK   KKAPGAPKR KSPYILFS++ RE IK  +P  AKVT++M  IA+ W  ++ +E++ W+  AE D+QRY+ EM+SY GPL+VP  R +++P  PKRA+SAF+ +S+ ++PQ++ E+ ++ N DI+K L E W  A+  +K P++EKEREDR+ YK+ ME W
Sbjct:   13 VAWADPIAEKGKKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: CCI48347.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 178.7 bits (452), Expect = 8.300e-41
Identity = 88/178 (49.44%), Postives = 127/178 (71.35%), Query Frame = 0

Query:  145 VASKTPVVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENW 323
            VA   P+  +  KRK   KKAPGAPKR KSPYILFS++ RE IK  +P  AKVT++M  IA+ W  ++ +E++ W+  AE D+QRY+ EM+SY GPL+VP  R +++P  PKRA+SAF+ +S+ ++PQ++ E+ ++ N DI+K L E W  A+  +K P++EKEREDR+ YK+ ME W
Sbjct:   13 VAWADPIAEKGKKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPDDAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: XP_008870171.1 (hypothetical protein H310_06772 [Aphanomyces invadans] >ETW01173.1 hypothetical protein H310_06772 [Aphanomyces invadans])

HSP 1 Score: 176.0 bits (445), Expect = 5.400e-40
Identity = 85/166 (51.20%), Postives = 122/166 (73.49%), Query Frame = 0

Query:  157 KRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENW 323
            K++   KKAPGAPKR KSPYILFS++ RE IK  + P AKVT++M  IA+ W  ++ +E+  W+  AE D+QRY+ EM++Y GPL+VP  R +++P  PKRA+SAF+ +S+ ++P+++ EH EM N +I+K L E W  A+K +K PF+EKE+EDRA YK+ ME W
Sbjct:   25 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: XP_008894641.1 (hypothetical protein PPTG_03713 [Phytophthora parasitica INRA-310] >ETI40949.1 hypothetical protein F443_13786 [Phytophthora parasitica P1569] >ETK81049.1 hypothetical protein L915_13438 [Phytophthora parasitica] >ETL34475.1 hypothetical protein L916_13326 [Phytophthora parasitica] >ETL87745.1 hypothetical protein L917_13145 [Phytophthora parasitica] >ETM40974.1 hypothetical protein L914_13234 [Phytophthora parasitica] >ETN20788.1 hypothetical protein PPTG_03713 [Phytophthora parasitica INRA-310] >ETO69617.1 hypothetical protein F444_13840 [Phytophthora parasitica P1976] >ETP10738.1 hypothetical protein F441_13711 [Phytophthora parasitica CJ01A1] >ETP38863.1 hypothetical protein F442_13634 [Phytophthora parasitica P10297] >KUF77888.1 High mobility group protein 1.2 [Phytophthora nicotianae] >KUF96456.1 CBL-interacting protein kinase 33 [Phytophthora nicotianae])

HSP 1 Score: 175.6 bits (444), Expect = 7.100e-40
Identity = 85/166 (51.20%), Postives = 123/166 (74.10%), Query Frame = 0

Query:  157 KRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENW 323
            KRK   KKAPGAPKR KSPYILFS+E RE IK  +P  +KVT++M  IA+ W  ++ E+++ W+  AE D+QRY+ EM++Y GPL+VP  R +++P+ PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+ E+K PF+EKE+ DRA YK+ ME W
Sbjct:   27 KRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKADRARYKREMEEW 192

[Close]

BLAST of NO02G03890 vs. NCBI_GenBank
Match: XP_009535967.1 (hypothetical protein PHYSODRAFT_288743 [Phytophthora sojae] >EGZ09334.1 hypothetical protein PHYSODRAFT_288743 [Phytophthora sojae])

HSP 1 Score: 175.3 bits (443), Expect = 9.200e-40
Identity = 86/166 (51.81%), Postives = 122/166 (73.49%), Query Frame = 0

Query:  157 KRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEIMSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRRNPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEEKLPFLEKEREDRAVYKKAMENW 323
            KRK   KKAPGAPKR KSPYILFS+E RE IK  +P  +KVT++M  IA+ W  +  EE++ W+  AE D+QRY+ EM++Y GPL+VP  R +++P+ PKRA+SAF+ +S+ ++P+++ EH +M N +I+K L E W  A+ E+K PF+EKE+ DRA YK+ ME W
Sbjct:   27 KRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDEEKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 192

The following BLAST results are available for this feature:

BLAST of NO02G03890 vs. NCBI_GenBank

BLAST of NO02G03890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM30285.1	8.300e-57	35.81	high mobility group protein [Nannochloropsis gadit...	[more]
XP_008618015.1	6.400e-41	50.00	hypothetical protein SDRG_13697 [Saprolegnia dicli...	[more]
XP_012203441.1	6.400e-41	50.00	hypothetical protein SPRG_08822 [Saprolegnia paras...	[more]
OQR97092.1	6.400e-41	49.46	hypothetical protein ACHHYP_12750 [Achlya hypogyna...	[more]
OQS00320.1	6.400e-41	48.40	hypothetical protein THRCLA_06027 [Thraustotheca c...	[more]
CCA15692.1	8.300e-41	49.44	high mobility group protein putative [Albugo laiba...	[more]
CCI48347.1	8.300e-41	49.44	unnamed protein product [Albugo candida]	[more]
XP_008870171.1	5.400e-40	51.20	hypothetical protein H310_06772 [Aphanomyces invad...	[more]
XP_008894641.1	7.100e-40	51.20	hypothetical protein PPTG_03713 [Phytophthora para...	[more]
XP_009535967.1	9.200e-40	51.81	hypothetical protein PHYSODRAFT_288743 [Phytophtho...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007049	NSK007049	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G03890.1	NO02G03890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627382	gene_983	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100003g87	gene383	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G03890.1	NO02G03890.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G03890 ID=NO02G03890|Name=NO02G03890|organism=Nannochloropsis oceanica|type=gene|length=4690bp
ATGTCCTCCCCACCCCGTCCTACAGCCATTACTGACTCTGCATTCAACTG
CTTTGATGATCTTCACCTGGAAGATCAGGAAGAAAACTTGAACCCCTTTG
CGGAAAGCAGCAGCCCACAGCATCACCCGGGGCAGAAAAGCTTCAAAATT
GGGACGCGTGGGCGTAGTGGAGGCTTGACCATGGAGGACGCCTTAGGACC
TTTCCGCCGGGGCATCGAAGAGGACAACCAATTCTTTGACATGGACACGG
ATGATCCATTCAAGgtaagtgctgccctgttcggacctagtagagtgtgg
gcacgaagaggccttcaagggaggggaggggagggaggggagggaggtgc
agaggaaagaagaaaattgtcatagcatgacaacgttctgcacgtaggat
tgagaacaccattattgtcattcagggcatgtaggtgccgatgaggaagg
cgatttcctcgtgggggaggatcgaacaaaattcacatgtgcgcaagctt
tgggggtatctctctctctcgaagcgacctctgtatgcctctgtgccatg
aatcggtcatgtatgcacgataagtcagggatgcagtctattgtatactc
cttcgtggctagccgatcgacgacgacaagaagaatgagatgggttaaat
aactaacgtgcctgttcatattctccatctcgctccccacagTCGTTCGG
ACAACACATGGAGGACGAAGGAGGAAGGTACGAAGTCAAGGAGGAGGCCT
TTGTGGAGGTTATGAGCGCCGATGATGAAGGGGAAGACGACGATGAGCTG
CTCGACGAGGATGACCTTGACGGGGAGGATATTGACGAAGTGTCCAGCCA
TAAAAGCACTGTGGCTTCGAAGACCCCCGTCGTCCGACGACGCCTTAAGg
tatgtaaattgagttatcgtttgaggggcgaaaagagaaaaagtgcctcg
ctcttggggtattcttgattctttttcggcctcttttccgtccggtgtgt
cttaactaaccagacatcgttctgtcgccttggcggtctggtttgactgg
tctgtcgcgctggcatatttccctacttaaaaaaaaaaaaatcaaaacat
aagtaactcatgcactcgcacattcgttcccttgacagCGTAAGGCTGCC
CTGAAAAAAGCTCCCGGCGCGCCAAAACGATTCAAATCCCCCTACATCCT
CTTCTCGATTGAATGCCGCGAATCCATCAAACGGCAGCTCCCCCCGCAAG
CCAAAGTCACGGAGATCATGTCAAAGATCGCTGAGACCTGGAGAAACCTC
ACTCCAGAGGAACGCAAGCACTGGCAAGACAAAGCCGAACGTGACCGCCA
ACGCTACGACTCCGAGATGTCGTCGTACCAAGGCCCTCTCAAGGTGCCAC
GGGTCCGCCCCCGCCGCAACCCCGAGCAGCCGAAACGGGCTACTTCAGCT
TTTATGCAGTTTTCGCGGTCGGTCAAGCCGCAAATGCGAATGGAGCACAC
GGAGATGAGCAATGCCGACATCACCAAGATGCTGACAGAGAGGTGGAAGG
GGGCGAGTAAGGAGGAGAAACTGCCTTTCTTAGAGAAGGAGAGAGAGGAC
CGCGCAGTATACAAAAAAGCCATGGAGAATTGGCAAGAGGATGTAGGTCG
TAAGGCAAAAGCAGATGGAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAG
CTGTAGCAGCGGGAGCAGGAGGGGGAGGAGGATTGAGAGAAGGCCAGGAG
GGGTTGGATGAGATGGAGCTTAGGGTTTCTGAAGAGGGAATTACCACCAC
AGCCATGGTAACGTCGAGACGGACGGGTCTGAAGGTGGTTTCATCTGTGC
CACCACCACCACCAGCAGCAGAGGCAGAAGCAGCACCGGTCATGAAGAAC
CTCTGCTCACCGCCACTCATGACCGTGACACAAGCGTATGTACCACCAAC
AACAACAACAGCCTCACTACCGTATCAGCAGCTACAACATCAAAACCAGC
ACCAGCCACAGGCTCAACGACAACGACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACATCATCAACAACAACA
ACAACAACAACAACAACAACAACAGCATCGGCACCAGCAGGAAGCCCGTC
AGCAACAAGAAAGGCAACATCAACAACAGCAGCACCTCCTCCAGCAACAA
CAACTTCACCAGCAGCAACAGCGCGAGAAACGAGAACAACAACGGGAGCA
ACAGCAGGAACGAGAGGAACAAGCGGCTCAGTACCGGGATGATTCCCTCC
TCACGGAGTACCTCTCAGCCGCCCAGGAATCCTTCAAGCTTTACGACAAC
TTTACACGCGGGATACAGGCCGAATCTGCTTCCGCCGCCGCTCTCTCCTT
CCACAAAATGGAAGATGACAGCTGTAATGCGAGCAGCTCCTGCTCCTCCG
CCTACCAAGATATGCTCCTTCCTGTTTCTATTCCCGCTGGCCGGAAGTCC
CCAGTGCTCTCTCGGGCATCCTCCGTCTCGGCACCGAGCCTGGACGCGGG
TTTCACCACAGCAGGCAAGGGCGAAGAGGCATTGGATCACCTACAGTATC
GGCAGGGGTCATCCAAGCGGGAGCATTCTAGTAAGATCAGTCCATGGTTA
ATACCCATGTTGAGTCGGTCTCCTGTCGGGAGCCCCTTGCACTCACCCGG
TGAGTTGAGTGTGTCGTCTACTTCCTCCTTTGCCGACAGTCACCATAGCG
GCCCCAACGGTGGCCAAGGAAATGGCAGTGAGAGCGAGGGACAGAGATTT
AAGCTTAGAGCCGCGCAAGAAATGTTGGGGCAAGATCGGCCTCATCACTC
TAGCATGTGTGTGGCTGCTGCTGCTGCTTCTTCTGATTCGGGCACTTCTT
CCCACGGGGAAGCTGCCCGAGGGGACAATGACAGGAAATTGATACAAAAC
ACCAACAGTCCCACGAACTACTACATCGCCACGCCCGCCTACAAGCAGCA
GCTTAGTTATCACCATCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AACCACACCAACGAAAAACATTCTCCCGTGAGGAACAAAATCTGCTCGGC
CTTCCTCCCTCCACTCCCTCCTCCCCTCCATACCTCCCCTCTTCTTTCCT
CCCTGCCCCGTTGGATATCGTATCCATGTCCCGCCAAACTGCCTCTCTTC
CTGCCGACGGCAAAAACAACTACGACTTGTGCAGCAGAAGCAGTAGCTGC
CCGCCGCATAACCCACAACACCCACCTTCTAACGTAGTTACGACGGTGGC
ACCTGGAGAAGGAGTGAGTCAGACGACCTACCTACCACTCATGACTGAAT
GGCCGCCCACTGCGTCCTCCTTAGCTGTGGCTCGTGGGGCGATTGTGGAT
CCTTCTGCGAGTGCGCGAGCGAAGGGGACGATATCCTCATGCAATGGGGT
CCAGGGCATGGGGGATGGGACGGAGGTTTATGCAGTGAGGTGATGAGTAA
GCCGGTAGTAGCGGCAGTTGAGAGCTCTTTCTCTCCAACAACAGCATGAT
GGAGCTATCAATCAGCTGATGGCGCCCGCACATGACCAGCAGGACATGAC
GAGTGATTTGTATTATCATGTTCAGGGCGCGTCCGATTGTGTTTTATGTC
AATACGTGTGTGTCCAGCACCATGACGTCTCCTATGCATTGCCCACTCTC
CCTCGCCCCTACCTTTCTCCCATTCCCCTGACCGTAACAGAGTAGATGAA
GCATTTTATTCTCTTTTACCAGACTCAAAGGACCAAGTGTGTCAGTCGAT
CAATCGATTAGCCACAATCAGTAACAGCACCAGCAGCAGGCAGAACGAGA
TACTATGAATGAGAGAGATGGTGGAGCTGCTCCTCCTGAAGTATGCATTG
TATCTGCCTTCTTTGTGCGCAACAACTGTGATACTTGTCTGAAATTAGGA
GAAGAGAGTACACATGGTAGGGGGAAGAGATTGTAGTACGTGGGAGACGA
GAGAGAAGCTAAAGGAAGGAGGAGAGACAAAAGACAGACAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAAATGTCAAGATCAA
ATAAATTACAATTGCCCTTCTGTTCGTCATCTTCTGTCTGTGAGACCTTC
GAACGTTATAGATAGAGAAGGAAAATAAATACCAGTTTGGAAGCCCCAAA
GAAATATCACCCTCCGTGTGTGAAGGGTCGCCAGCATGTGTTTGTATGAA
CGAATCCTGTCCGGTAGCATGATCGTGTGCTTCCACGGATAAAATATTGA
AAGAGAATTCACAAGTCCTAGTCATAAATGGAAAAGACAGCGAGACGATA
GCGGAAGGCCAGTGAACCAAATGCGCGCTTGCGACCGTCAGTCAAGGAGA
ACCCATAAAACGAGACGAAAATACTTCATTACTATCATTCACAGGGGCTT
ATCCCCGTCCAAGCCTCTTTGCTGCAAGCGCTTTTCACCTCATTTTTTCA
TATGGGAAGGTCCAAGGTCCAAAGAAAATGTGCATAGAACATAAAGGGCA
TGCTACAGAAAGCTCAAGGGGGGGATGCACCGCAAGTCCGCTCATTTCTG
CGCTGTCGTTTCTCATTGTCATCCAGCAGCAGCGGCAAGCGTGAGTGCTG
AACAATTGTGGAAGAATCAATGATTAATGCAAGCGCCAGT

protein sequence of NO02G03890.1

>NO02G03890.1-protein ID=NO02G03890.1-protein|Name=NO02G03890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=942bp
MSSPPRPTAITDSAFNCFDDLHLEDQEENLNPFAESSSPQHHPGQKSFKI
GTRGRSGGLTMEDALGPFRRGIEEDNQFFDMDTDDPFKSFGQHMEDEGGR
YEVKEEAFVEVMSADDEGEDDDELLDEDDLDGEDIDEVSSHKSTVASKTP
VVRRRLKRKAALKKAPGAPKRFKSPYILFSIECRESIKRQLPPQAKVTEI
MSKIAETWRNLTPEERKHWQDKAERDRQRYDSEMSSYQGPLKVPRVRPRR
NPEQPKRATSAFMQFSRSVKPQMRMEHTEMSNADITKMLTERWKGASKEE
KLPFLEKEREDRAVYKKAMENWQEDVGRKAKADGAAAAAAAAATAVAAGA
GGGGGLREGQEGLDEMELRVSEEGITTTAMVTSRRTGLKVVSSVPPPPPA
AEAEAAPVMKNLCSPPLMTVTQAYVPPTTTTASLPYQQLQHQNQHQPQAQ
RQRQQQQQQQQQQQQQQQQQQQHHQQQQQQQQQQQQHRHQQEARQQQERQ
HQQQQHLLQQQQLHQQQQREKREQQREQQQEREEQAAQYRDDSLLTEYLS
AAQESFKLYDNFTRGIQAESASAAALSFHKMEDDSCNASSSCSSAYQDML
LPVSIPAGRKSPVLSRASSVSAPSLDAGFTTAGKGEEALDHLQYRQGSSK
REHSSKISPWLIPMLSRSPVGSPLHSPGELSVSSTSSFADSHHSGPNGGQ
GNGSESEGQRFKLRAAQEMLGQDRPHHSSMCVAAAAASSDSGTSSHGEAA
RGDNDRKLIQNTNSPTNYYIATPAYKQQLSYHHQKQQQQQQQQQQPHQRK
TFSREEQNLLGLPPSTPSSPPYLPSSFLPAPLDIVSMSRQTASLPADGKN
NYDLCSRSSSCPPHNPQHPPSNVVTTVAPGEGVSQTTYLPLMTEWPPTAS
SLAVARGAIVDPSASARAKGTISSCNGVQGMGDGTEVYAVR*

Synonyms

Publications