NO02G03880, NO02G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03880 vs. NCBI_GenBank
Match: PKI57754.1 (hypothetical protein CRG98_021821 [Punica granatum]) HSP 1 Score: 88.2 bits (217), Expect = 1.900e-13 Identity = 93/429 (21.68%), Postives = 180/429 (41.96%), Query Frame = 0 Query: 185 YQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALAS-----------------LLSCEGRWDDF---KIVE------ENLRARDFPESIKER---FYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGW--------------AIFDF--------------------DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT 551 Y +LKAC LG V + ++ + G ++ + + ++ FR + ++M E D +N VM+CC + GR E+A+ LF M+G G++ +T+ S L+ C D F +V+ E +A++ E + E+ ++ + S D + +L+RM+ G PS+ LS+ + A + A + + G+ ++ DF DV ++NV+I+ YAS N A F+++ G RP I++++I VC+ + + KE + + E N I + ++ A V +A ++ E ++ + + ++T ++ A G G A+ ++ L+ +M R + + P+ T AC+ Sbjct: 111 YPNVLKACGELGRVGNGEAFHAQLVKAGCLSDVVIGSSAVSMYANCRRFRDAVRVFDEMGE----RDAACWNTVMSCCYQSGRPEKALELFERMKGSGVKPSLVTFTTAISSCSRLLDLERGKEIHGELVKCGLPLDGFVGSALVDMYGKCGELEKAKEIFEQMPEKTVISWNAMISGFSLIGDSSLCIGLLKRMNGEGIKPSL----ATLSSILTAASRSAQLQDGKFIHGYIIRNGVALDLFLDCSLIDFYFKCGRVASAENVFRKSGRMDVNSWNVMISGYASVGNYFEALEIFDEMKRVGGRPDAITFTSILSVCSQLASLEKGKE-IHETIKESRFETNGIVMGALLEMYA-KCGAVNEAHQVFERLQ-----IKDLMSWTSMIAAYGSHGRAQESLNLFAKM-RAENIEPDKVTFLAVLSACS 523
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_015573544.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04780-like [Ricinus communis]) HSP 1 Score: 87.0 bits (214), Expect = 4.300e-13 Identity = 156/712 (21.91%), Postives = 287/712 (40.31%), Query Frame = 0 Query: 175 NSDFEFT--EAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDF--KIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAI---FDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDAREL------LETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSA-DSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAA-----------YDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEM 862 +S+F T Y LL C P K++ V +LG+ P+ I + S FF+ KMV+ T PD +++ +++ + G G+EA+ F M G++ T+ +L L +C D + + V + F I E F + + A+S + A+ + + M G P+ + ++ C R ++ G+ I +D D+ + N +++ YA LE A FE+I +P ++S++ I C + A E ++ G + PN+ T++ A++A A E R+L ++ D F V Y+ DARL L++ M D +V W A I + +DL A+S S E V + ++ + ++ Q +D+ Y N+++ K G K A R++ + D +A ++ A ++ E LK++ E++ R+ +R + + +++LNA ++ L+A E + QV F F + Y G + R +SE+ G+ VS+ +++ A G +A+ R E G+P N+ T+ L C + + A + + + G+ Y ++ + AG+ +KLLD M Sbjct: 55 SSNFHSTPISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYA----RKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSL--LKACTSTTDMWLGRQVHGTVVVTGF--EIXE-FVAXXLYAQSD--XCEEAVVLFQDMILSGIRPNEFSLSCMINACTGLEDSSQGR----KIHGYLIKLAYDLDLFSANALVDMYAKVGTLEEAIRVFEEI----AKPDIVSWNAIIAGCALREYHCWALELFGKMNRSG-MCPNMFTISSALKACA-GMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYS----KCDLMTDARL---LFNLMPERDLIV------WNAAI--------TGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQ--FDN-----YVANSLIDTYGKCGRIKDATRIF----QESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRK--IRPDSFVCSSLLNACAN---LSAYE------QGKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGI----VSWSAMIGGFAQHGHGKEALQLFNRMLEDGIPPNHVTLVSVLCACNHAGLVAEAQNYFKSMEKVFGIEPIQEHYACMIDLLGRAGKLDEAMKLLDMM 698
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024534816.1 (pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like [Selaginella moellendorffii]) HSP 1 Score: 86.7 bits (213), Expect = 5.600e-13 Identity = 133/640 (20.78%), Postives = 244/640 (38.12%), Query Frame = 0 Query: 240 LEKMVECGTIPDGK------------AFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWA-LASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQA--------------LAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQ---GQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEF-FQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEI---DQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVC 846 ++ CG+I D + ++N ++ + GE A+ LF+ M IE P + +A++ +C NL A++ ++ R A + R A D+ + G + + + G A R E+ DVA +N+++ YA + E A FE + G P+ ++ + K CTS+ + + ++V G + + A++ L + DAR++ + M R N ++ L++ E +A A+ L+ M R P+ + A ACT ++ D + +G V L M + G E + G G D+V + A++ ++GDG+LAL ++ M+++ D +A A L+A E G +I E R + + + N V++ + + A + F L+ + D ++T A Y + GD + V L+ M G + V++ SLL A + AG + + V L +Y + ++ RS S AL+M+ + + N V + SVL+ C Sbjct: 201 VDMYANCGSITDARKVFDRMESWDVVSWNALLLGYAENEEGELALRLFSCMA--SIEDAPQNHLTFVAAIKAC-----------TNLAAKEKGRNVDGRLLKVAALER--------ASDLHTQATASGHDRNAKVAGALVDMYAKCGIMVAARRVFEK-----FSPLDVALWNILMLGYADNKEAEVALEVFESMNSQGFTPNSRTFVAVLKACTSLAAKEEGRSLNGKVVKLGCLEKGVAIHRQALELGCDGDIYLASTLVDLYAKCGSLTDARKVFDAMLRR-----NEVSWNALIQGYVESNEAEGALALFSEM-RTSTCAPDALSFVAAIKACTALGAEELGKQQPDGKLVKVVSLEKGRAVHDQARNSGWDANTFVRNSLVDMYAKCGSLEDARRLLDGIPGCDAV-----SKTALMQGYAESGDGELALEIFWAMESR----DALAFAAALKACGSIAALEPGRRI--HAEACRVDFGRDSLVPNGVVDFYAKCGSMDAAQHAFDSLQSR---DSVNFTALIAGYSHQGDSSAVFDLFHAMEDEGCDANAVTFVSLLTACSRAGLVRNGQSYFSAMAAKFGVRPGLEHYVCMVDMLA--RSNHLSQALAMVEGMPFQP----NTVLWTSVLSAC 788
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_006470740.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Citrus sinensis]) HSP 1 Score: 86.3 bits (212), Expect = 7.400e-13 Identity = 114/516 (22.09%), Postives = 221/516 (42.83%), Query Frame = 0 Query: 394 DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRR--SEEVGVPLN-NYTVALTLIGCKRSRRWSTALSMLR---ELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGV 903 DVA++N VI+ Y + E A F+K+ ++G++P+ ++ +T+ C + + KE + + + +E ARE+ E V+ + A+ L+ +GD++ +EL+ RM +G+ P TI ++C++ S G+ V L + + G R A+ S ++Y +N +++ GD AL +Y+ M+ G D + +L A ++ E+G +I + + + E E V A+L+ + + A + F +L E+ V S+T AAY + G +L+ EM+ D +++ +LL A ++AG +D+ + SE P N +Y+ + L+G R+ R A +L+ E+R++ GL+ +++ + C K+ + E D PD +S + L+ + ++ + + VR RL +E G+ Sbjct: 171 DVASWNTVISCYYQDGQAEKALELFKKMRDSGVQPNSVTLTTVISSCARLMDLERGKEIHKEFI--XXXXXXXXXXXXXXXDMYGKCGCLEMAREVFEQT-----VLKSVVAWNALIAGYSSRGDSKSCVELFWRMNE-EGIKPTLTTISSVLMSCSR-----------------SGQLKHGKVVHGYIIRNKIQGDVFINSSLIDLYFKCG-RVSSAENVFEKMSKTDVVY-WNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIV--MGALLDMYAKCGAVDEAFKVFNELPERDLV---SWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNQMISEYNIKPRNEHYSCLIDLLG--RAGRLQEAYGILQSTPEIREDAGLL------STLFSACRLHRDIEMGEKIAKLLIEKD--PDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGL 644
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024188926.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X1 [Rosa chinensis] >PRQ41568.1 putative tetratricopeptide-like helical domain-containing protein [Rosa chinensis]) HSP 1 Score: 85.9 bits (211), Expect = 9.600e-13 Identity = 94/425 (22.12%), Postives = 185/425 (43.53%), Query Frame = 0 Query: 185 YQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWAL----ASLLSCE-GRWDDFKIVEENLRARDFPES--------------IKERF----------YSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTAL-----STCMAAGAY---QAVRDFVE-EVRGWA-----------------IFD----FDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT 551 Y +LKAC LG V K + + + + G ++ + + + + F GI ++M E D +N ++C + G+ ++AM L+ MR G E +T + A LL E GR ++++ F S KE F +++ + A S D + +D+ RRM + G PS+ F++ L S + G + +R++VE ++ ++ +F+ +V ++NV+I+ Y N A ++++ EAG+RP+ I+ ++I VC+ + + KE + R V + ++ N I + A+ + V++AR + + R + ++T ++ A G G + A++L+ M++ P+ T+ AC+ Sbjct: 109 YPSVLKACGALGRVGLGKMIHNHLIKTGFISDIVVASSLVGMYAKCNVFDPGIQLFDEMPE----RDVACWNTAISCYYQNGQAQKAMDLYEKMRSSGFEPNVVTITTVISSCARLLDLERGREIHKELIQNRFVLDSFVSSALVDMYGKCGCLDIAKEIFEQVPRKNVIAWNSMIAAYSVTGDSESCIDLFRRMTDEGTSPSLITFSSILLAISRSVQLQHGKFVHGYMIRNYVEADIYVYSSLIDLYFVCGSISSAKNVFEKMSKTNVVSWNVMISGYVKVGNYFRALGLYDEMKEAGVRPNAITVTSILSVCSQLTALEKGKE-IHRTVVDSELETNEIVMG-ALLDMYAKCGVVDEARNIFNRLPGR-----DLVSWTSMITAYGSHGQTKEALKLFDEMQQ-SNAKPDGVTLLAVLSACS 521
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024188927.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X2 [Rosa chinensis]) HSP 1 Score: 85.9 bits (211), Expect = 9.600e-13 Identity = 94/425 (22.12%), Postives = 185/425 (43.53%), Query Frame = 0 Query: 185 YQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWAL----ASLLSCE-GRWDDFKIVEENLRARDFPES--------------IKERF----------YSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTAL-----STCMAAGAY---QAVRDFVE-EVRGWA-----------------IFD----FDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT 551 Y +LKAC LG V K + + + + G ++ + + + + F GI ++M E D +N ++C + G+ ++AM L+ MR G E +T + A LL E GR ++++ F S KE F +++ + A S D + +D+ RRM + G PS+ F++ L S + G + +R++VE ++ ++ +F+ +V ++NV+I+ Y N A ++++ EAG+RP+ I+ ++I VC+ + + KE + R V + ++ N I + A+ + V++AR + + R + ++T ++ A G G + A++L+ M++ P+ T+ AC+ Sbjct: 109 YPSVLKACGALGRVGLGKMIHNHLIKTGFISDIVVASSLVGMYAKCNVFDPGIQLFDEMPE----RDVACWNTAISCYYQNGQAQKAMDLYEKMRSSGFEPNVVTITTVISSCARLLDLERGREIHKELIQNRFVLDSFVSSALVDMYGKCGCLDIAKEIFEQVPRKNVIAWNSMIAAYSVTGDSESCIDLFRRMTDEGTSPSLITFSSILLAISRSVQLQHGKFVHGYMIRNYVEADIYVYSSLIDLYFVCGSISSAKNVFEKMSKTNVVSWNVMISGYVKVGNYFRALGLYDEMKEAGVRPNAITVTSILSVCSQLTALEKGKE-IHRTVVDSELETNEIVMG-ALLDMYAKCGVVDEARNIFNRLPGR-----DLVSWTSMITAYGSHGQTKEALKLFDEMQQ-SNAKPDGVTLLAVLSACS 521
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024525224.1 (putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 84.0 bits (206), Expect = 3.700e-12 Identity = 112/523 (21.41%), Postives = 218/523 (41.68%), Query Frame = 0 Query: 404 SYASERNLEGASTW--FEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEE--LADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSL-LYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEAL------NKGK------MPERGLKIWSELEGRRAEVRENVN--ITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVG---VPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVL 904 S A +RN T F+++ G+RPS+ KVCT+ + + K+ E + S GD + N + A S +++AR++ E++ R +++ L+ + G +A +LY RM+R +G P T+ A AC+ A EE + D + G+ V L M + G + ++ ++ + A+NA++ ++GDG+LA+ +YA M+ +G D + + L+A +GK + ++ L+ + A + ++ + + N +++ + + A F+ ++E+ V S+ A Y GD L + M G + D V++ + L+A ++ G ++ + R+ G VP VA LI + E +K L V ++++L + G +L + M++ I PD+ + L A AG ++ +R +E G++ Sbjct: 122 SNAKKRNGADRETLAKFQRLQREGMRPSIGIILAALKVCTNSRDLEAGKKIHEYVSSSGDFSSTIFIPNTLVDMYAKCGS-LDEARQVFESIHSR-----TVVSWSALILGYAQSGQGEMAWDLYSRMQR-EGCAPNRVTLLAALKACSS---LAEKEEWKMIDGRLLKPVCLERGKAVHLRAAESGDDSSPFVENSLVDMYWKCG---SMVDARRVFERMKHHDVVAWNAIILGYAQSGDGELAMEMYARMKDEGCAPDRVTLLATLKACACLAEKEQGKVVDGSVVKDQCLRQGRAIHDLAATLGDDSHTAVANTLVDMYAKCGSMADARSVFERIQERSVV---SWNCLIAGYAQAGDGNIALELLTRMEEEGCSPDAVTFVAALKACSSLGALESGRELHARASIDGFETVP----AVANALIDFYGKCGSMPDAEEVFEAACKKSL----VTWSALLAGYSFQGNTSQVFQLFERMQKERIQPDHIAFLSVLTACRYAGLVDKAKEYFRSMREEFGIV 620
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024525225.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 84.0 bits (206), Expect = 3.700e-12 Identity = 112/523 (21.41%), Postives = 218/523 (41.68%), Query Frame = 0 Query: 404 SYASERNLEGASTW--FEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEE--LADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSL-LYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEAL------NKGK------MPERGLKIWSELEGRRAEVRENVN--ITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVG---VPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVL 904 S A +RN T F+++ G+RPS+ KVCT+ + + K+ E + S GD + N + A S +++AR++ E++ R +++ L+ + G +A +LY RM+R +G P T+ A AC+ A EE + D + G+ V L M + G + ++ ++ + A+NA++ ++GDG+LA+ +YA M+ +G D + + L+A +GK + ++ L+ + A + ++ + + N +++ + + A F+ ++E+ V S+ A Y GD L + M G + D V++ + L+A ++ G ++ + R+ G VP VA LI + E +K L V ++++L + G +L + M++ I PD+ + L A AG ++ +R +E G++ Sbjct: 76 SNAKKRNGADRETLAKFQRLQREGMRPSIGIILAALKVCTNSRDLEAGKKIHEYVSSSGDFSSTIFIPNTLVDMYAKCGS-LDEARQVFESIHSR-----TVVSWSALILGYAQSGQGEMAWDLYSRMQR-EGCAPNRVTLLAALKACSS---LAEKEEWKMIDGRLLKPVCLERGKAVHLRAAESGDDSSPFVENSLVDMYWKCG---SMVDARRVFERMKHHDVVAWNAIILGYAQSGDGELAMEMYARMKDEGCAPDRVTLLATLKACACLAEKEQGKVVDGSVVKDQCLRQGRAIHDLAATLGDDSHTAVANTLVDMYAKCGSMADARSVFERIQERSVV---SWNCLIAGYAQAGDGNIALELLTRMEEEGCSPDAVTFVAALKACSSLGALESGRELHARASIDGFETVP----AVANALIDFYGKCGSMPDAEEVFEAACKKSL----VTWSALLAGYSFQGNTSQVFQLFERMQKERIQPDHIAFLSVLTACRYAGLVDKAKEYFRSMREEFGIV 574
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_021970811.1 (pentatricopeptide repeat-containing protein At4g21065-like [Helianthus annuus] >OTG23440.1 putative tetratricopeptide-like helical domain, DYW domain protein [Helianthus annuus]) HSP 1 Score: 83.6 bits (205), Expect = 4.800e-12 Identity = 72/351 (20.51%), Postives = 147/351 (41.88%), Query Frame = 0 Query: 187 ELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVP 538 +LL+ +LG V+ + L DE+ V +WT+ I + S + I+ M++ G PD F +V C + + ++++M G E A + GR D + + E + +S+ + V RD++ AL + +M G +P + T LS G ++ + ++ G+ + ++ ++ +I + A F K+ G++P+ + S++ VCTS+ L KE + ++ NL+ N I + S++ AR+ ++ + + ++ +L A KG ++L + M+ + G +P Sbjct: 119 QLLEFYCKLGTVDDTRKLFDEMSERNV----FSWTSVIGLYSELGDYEEVISLFYMMIDQGVRPDHFVFPKVFKACAQLRDYKSGKDVYDYMTSIGFEGNNSVKRAFLDMFLKCGRMDIARRLFEQM------DSVDVVMCNMMVSGYVSKRDFERALRYVDQMRLKGVMPDRVTYNTILSGLAQVGRFKEAAKYFSKMDGFGELEPNIVSWTALITGNMQNGSPSRALNIFRKMINRGIKPNSTTISSVISVCTSLCLERLGKEIHGYCIKTEELDSNLVVNNALIDFYSKSQNVNNGARKNFNKIQHK-----DLVSWNSILAAYATKGCRDDVIKLLYEME-LQGFLP 453
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024536223.1 (pentatricopeptide repeat-containing protein At2g33680-like [Selaginella moellendorffii]) HSP 1 Score: 83.6 bits (205), Expect = 4.800e-12 Identity = 147/697 (21.09%), Postives = 256/697 (36.73%), Query Frame = 0 Query: 254 AFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDF-------------------PESIKERFYSTA---VV---ARSGARDWQG-ALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLIT----------------------------------LNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAG------EIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAG 885 +++ ++ + GR EA LF M GI +T + SC+ K V + A +F P K F S A +V A +GA G + +LR M G P+ TT S + R + + V N ++N YA +LEGA K++ R +IS+ST+ R A E + SE V PN +T + A+ L + ++EDA++ + + R + + F+L A E+G + +E Y M + P T IAC + ME+LA S G + +K + + +A G + + +N ++ + ALR+YA M G+ A+ + A L+A +K K E G K+ + + + E +V A+LN ++ L A + R + D +T A+Y G L+ M + + + V+Y S+L A ++ G +I +++G ++EE+ V + N ++L R A S ++ + +V + ++ G L+L+ EM+ +SPD + + L+A + G Sbjct: 36 SWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLLREMDLQGVKPNA---TTYASITRGSSTLTGCRAMEQRLLASGYMS-HVPVQNALVNVYAKCGDLEGA----RKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKR-----DVLCWNFMLSAYSERGSPQQVIEAYDAM----DVEPNAVTYTNVLIAC------SAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLY------IKCRSLKSACQVFEAMG-------KKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFET--DVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEG--KAEELDVAVQNSLLSL----YARCGSLRDAWSCFAKIHNR-----DVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEG 683 The following BLAST results are available for this feature:
BLAST of NO02G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03880 ID=NO02G03880|Name=NO02G03880|organism=Nannochloropsis oceanica|type=gene|length=4118bpback to top protein sequence of NO02G03880.1 >NO02G03880.1-protein ID=NO02G03880.1-protein|Name=NO02G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1229bpback to top Synonyms
Publications
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