NO02G03630, NO02G03630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016317157.1 (PREDICTED: RNA-binding protein 25-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 113.6 bits (283), Expect = 2.800e-21 Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSR-VATSVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K +G+ G+ V+ R + V SVF +DE + + R D E + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 625 PLQEENRPK--IGLSLKLGSSGSPGQPSVAKRKKLVVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGVDMSMAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDTA-LMEKRIRPWINKKIVEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 812
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012691066.1 (PREDICTED: RNA-binding protein 25 isoform X2 [Clupea harengus]) HSP 1 Score: 112.5 bits (280), Expect = 6.200e-21 Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVATSVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQ--KRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 I L K G+ + V R ++ SVF +DE + G K R D + S + GG + M +RQ K L+ +IP K LF+YP+DW+ VD +L+ R+R W+ KKI E +GEEE TL+D++CSK++ + P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 671 IGLSLKLGSTGSPSQPNVVKRKKLQDSVFNRFDDDEADEGPKKR-----KLVPLDYDDDKSQGLDGLGLGG-GKGADMEEKRQHIKSLIEKIPTGKPELFNYPLDWSAVD-PSLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMANSTPQGILDDVAMVLDEEAEVFVVKMWRLLIYET-EAKK 849
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_018902469.1 (PREDICTED: RNA-binding protein 25-like [Bemisia tabaci]) HSP 1 Score: 112.1 bits (279), Expect = 8.200e-21 Identity = 51/102 (50.00%), Postives = 76/102 (74.51%), Query Frame = 0 Query: 697 KRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 K L+ +IP DK ALF +P+DWA VD Q L+ R+R W+ KKI E +GE EPTL+D+ICSK+L P +L ++++VL+D+A++F K+WR++I Y IE++K Sbjct: 842 KSLIDKIPTDKSALFSFPLDWAAVDNQ-LIERRIRPWINKKIIEYIGEPEPTLVDFICSKVLAGSAPQGILDDVQMVLDDEAEVFVVKMWRLLI-YEIEAKK 941
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012679203.1 (PREDICTED: RNA-binding protein 25-like isoform X1 [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVAT--SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYT 794 I L K G+ G+ V R ++AT SVF E+EE + R DR + S S + K L+ +IP K LF YP+DW+ VD+ +L+ R+R W+ KKI E +GEEE TL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T Sbjct: 707 IGLSLKLGATGSPGQPHVVKRKKLATVESVFNRFEEEEESEAPRKRKLVPLDYGEDDRGGNLGLDGLDVSATKGGANSEEKRKHIKSLIEKIPTAKAELFSYPLDWSIVDS-SLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQTILDDVAMVLDEEAEVFIVKMWRLLIYET 887
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012679210.1 (PREDICTED: RNA-binding protein 25-like isoform X2 [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVAT--SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYT 794 I L K G+ G+ V R ++AT SVF E+EE + R DR + S S + K L+ +IP K LF YP+DW+ VD+ +L+ R+R W+ KKI E +GEEE TL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T Sbjct: 702 IGLSLKLGATGSPGQPHVVKRKKLATVESVFNRFEEEEESEAPRKRKLVPLDYGEDDRGGNLGLDGLDVSATKGGANSEEKRKHIKSLIEKIPTAKAELFSYPLDWSIVDS-SLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQTILDDVAMVLDEEAEVFIVKMWRLLIYET 882
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012679218.1 (PREDICTED: RNA-binding protein 25-like isoform X3 [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVAT--SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYT 794 I L K G+ G+ V R ++AT SVF E+EE + R DR + S S + K L+ +IP K LF YP+DW+ VD+ +L+ R+R W+ KKI E +GEEE TL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T Sbjct: 678 IGLSLKLGATGSPGQPHVVKRKKLATVESVFNRFEEEEESEAPRKRKLVPLDYGEDDRGGNLGLDGLDVSATKGGANSEEKRKHIKSLIEKIPTAKAELFSYPLDWSIVDS-SLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQTILDDVAMVLDEEAEVFIVKMWRLLIYET 858
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012679226.1 (PREDICTED: RNA-binding protein 25-like isoform X4 [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVAT--SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYT 794 I L K G+ G+ V R ++AT SVF E+EE + R DR + S S + K L+ +IP K LF YP+DW+ VD+ +L+ R+R W+ KKI E +GEEE TL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T Sbjct: 673 IGLSLKLGATGSPGQPHVVKRKKLATVESVFNRFEEEEESEAPRKRKLVPLDYGEDDRGGNLGLDGLDVSATKGGANSEEKRKHIKSLIEKIPTAKAELFSYPLDWSIVDS-SLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQTILDDVAMVLDEEAEVFIVKMWRLLIYET 853
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_012691065.1 (PREDICTED: RNA-binding protein 25 isoform X1 [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = 0 Query: 614 IDLPAKSRGAGNIGKAKVSSRSRVATSVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQ--KRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 I L K G+ + V R ++ SVF +DE + G K R D + S + GG + M +RQ K L+ +IP K LF+YP+DW+ VD +L+ R+R W+ KKI E +GEEE TL+D++CSK++ + P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 671 IGLSLKLGTTGSPSQPNVVKRKKLQDSVFNRFDDDEADEGPKKR-----KLVPLDYDDDKSQGLDGLGLGG-GKGADMEEKRQHIKSLIEKIPTGKPELFNYPLDWSAVD-PSLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMANSTPQGILDDVAMVLDEEAEVFVVKMWRLLIYET-EAKK 849
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016391880.1 (PREDICTED: RNA-binding protein 25 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 110.9 bits (276), Expect = 1.800e-20 Identity = 67/197 (34.01%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K G+ G+ V+ R ++A SVF DE + + R D E + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 625 PLQEENRPK--IGLSLKLGSTGSPGQPSVAKRKKLAVESVFNRFDNDEVDEAPRKR-----KLVPLDYEDEEKGVDMSMVAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDTA-LMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 812
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_018517151.1 (PREDICTED: RNA-binding protein 25-like [Lates calcarifer]) HSP 1 Score: 110.9 bits (276), Expect = 1.800e-20 Identity = 53/119 (44.54%), Postives = 82/119 (68.91%), Query Frame = 0 Query: 684 GPAPISGMLSERQ----KRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 G + I G +E + K L+ +IP K LF YP+DWA VDA L+ R+R W+ KKI E +GEEEPTL+D++CSK++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 694 GLSSIKGANAEEKRKHIKSLIEKIPTAKPELFSYPLDWAMVDA-TLMERRVRPWINKKIIEYIGEEEPTLVDFVCSKVMAHSMPQSILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 810 The following BLAST results are available for this feature:
BLAST of NO02G03630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03630 ID=NO02G03630|Name=NO02G03630|organism=Nannochloropsis oceanica|type=gene|length=2866bpback to top protein sequence of NO02G03630.1 >NO02G03630.1-protein ID=NO02G03630.1-protein|Name=NO02G03630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bpback to top Synonyms
Publications
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