NO02G03520, NO02G03520 (gene) Nannochloropsis oceanica

Overview
NameNO02G03520
Unique NameNO02G03520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4072
Alignment locationchr2:941332..945403 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:941332..945403 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO02G03520 vs. NCBI_GenBank
Match: EWM30319.1 (hypothetical protein Naga_100003g128 [Nannochloropsis gaditana])

HSP 1 Score: 862.4 bits (2227), Expect = 1.500e-246
Identity = 574/1042 (55.09%), Postives = 679/1042 (65.16%), Query Frame = 0 
Query:   58 MAIDGTSGRVTQRKRKRPLPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKRSRSNTTHNGMSGEGDEMAAEDLDVDEEDGGRGAAACLESSLTSTAGGHGATGKTFTRAIDKPRARSEIVRQVEKLVSNMFKELDVLLRAENINRRVMYRWSGAERSSSGAIGEGKASYCTWGRELIKQYIEDAIELVRTSLTMGDWDNSVEAARRLTLQYLGKAADRFIIENEPVLHAEVMNTLGNLWFALLPYMPPPQRHQFRRLVARIRKTNISSRSSRNNKVGNASCTSTA--AACTGILASGGAWGAV--NHSLAPAATCVDPQGQQLELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAVSFRCALQFAKLDLSPEALAVQGPHETQNKLAALLVSDVYECDAYICLWKVSEVLAGLKDFQVLCQEFRLKALDAEMWRCM---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVDNKDRLSISKLATIPGIMGMKKFENMQMICQHRSINTTTRSRPTGPFNNNTTTLTSTSSPGDVGEYNTC-CSPNPASISHIQPVHPASSPAVIVLPTTTPATLPKKTAAAPSSRFSNIRRSSDREGQESGSRVAGAERWRTKAALEDGEVDQYMDFMSLHQHEYRRVVTPDFLFRVRTFLEAFET-TPSALQDGRDGIRGTNIADAAAAPSLSPSSLLFVRSRPFLYRVATIIPTGQLDGYLDLLSSKIGFQATLLLLEPLLMDEQEIFSTGRVTQALEWAINHEEGRYLAVFSRLILPRIQSRTQLERIACHAVVYGQASLAVIDRALARVPRKNYEGMALNLCRRAVQNWGPGTRGVHLMVLRALQGMPSLGLYLKCRGCFSDPLPTLVRPLLHQLDPMGELSIGIRLVEGVVQXXXXXXXXXXXXXXE--GPERLAKAKRWMDFAFAGVRGGQFPPCVLERLFSNQIFLLAALGPPSADISCVEAVAGCFSKLAELSRTHSTAIAGPVQAIMNTYTTHPQKHLIWKAANEKGIEV 1089
            MA+DG  G  +QRKR+RPLPAS                                   N+KR R +    G S +GD +  E L  D+   GR AAA    S+ ST        +  TR   K R R + VRQVEKL+S MFKELDVLLRAE++NRRVMYRWSGAERSS   + EGK S CTWGREL+KQYIEDAIELVR++L  G+WDNSVEAARRLTLQY+ KAA+R I+E EPVLH EVMNTLGNLWFALLPYMPPPQRHQFRRL+ARIRK  I S +S   +   ++  +     + + ILASGGA GA    H L P  T  + Q Q+ +                                         SLAVSFRCAL+FAKLDLSPEALA QG  ETQ KLAALLVSDVYECDAYICLWKVSEVLAGLK FQ LCQEFRLKALDAEMWRCM   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       RLS++K+A IPGI  +K   NM MI  HRS+   T   P     +   +      P D   ++     P  A IS     H ++ P  IV  TT+P           SS+ +++RRSS  EG++  S V   +RW TKAALEDGE D +M+FMSLHQHEYRRVVTPDF+ RV TFLEAF++     +  G +   G +        S+S S+LLFVR+RPFLYRVAT+IP GQL+ YL L+S K G+  TLLL++PL+++EQ+  ST RV Q LEWA+++E+G  L  FSRLILP ++SRTQLE +A   + +G  S ++IDRALARVP K+YEG+A++LCR+AVQ+  P      L+VLRALQGMPSLGLYLKCR CFSDPLP LVRPLL +LDP+GELSIGIRLVEG+VQ                   ERLAKA RW++FA AGVRGGQFPP VL+RLFS+Q FLLAALGPPS +    E V  CFSKLAELS+T    + GP+Q+IM TY +   K  I KAA  KGIEV
Sbjct:    1 MAVDGLLGCTSQRKRQRPLPASDSSKSTTTNSAPHRGGTCPKSASLSSSATTNSISGNQKRIRVDDISYGASIDGDAIVVEYLKSDDRKTGRAAAAGQGGSVASTDEFPVGKAQISTRPGGKTRLRCQTVRQVEKLISTMFKELDVLLRAESVNRRVMYRWSGAERSSWSMLREGKISNCTWGRELVKQYIEDAIELVRSTLARGNWDNSVEAARRLTLQYIVKAAERSILEYEPVLHEEVMNTLGNLWFALLPYMPPPQRHQFRRLIARIRKI-IGSITSGGGRGFQSAVDNDVDQGSFSNILASGGARGAAFSGHCLLPQPT-KETQHQKRQYN------------------------------------SGGSLAVSFRCALEFAKLDLSPEALAAQGHQETQKKLAALLVSDVYECDAYICLWKVSEVLAGLKGFQALCQEFRLKALDAEMWRCMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSVNKVAAIPGITSLK---NMPMIHHHRSV---TCQSPCKSGLDELLSPPPVYPPYDARNHSEINLGPMQALIS---GSHRSAKPMKIV-NTTSPL----------SSKLTSVRRSSVHEGEDKNS-VGQPDRWCTKAALEDGETDNFMEFMSLHQHEYRRVVTPDFILRVWTFLEAFDSQITHVVSKGPESKSGVSF-------SISTSNLLFVRARPFLYRVATVIPAGQLNDYLGLMSDKFGYSGTLLLIKPLIVEEQDFHSTRRVRQVLEWAVDYEQGLQLDCFSRLILPHLRSRTQLELLARRTIAHGIRSFSIIDRALARVPSKSYEGLAVDLCRQAVQHLCPVKCPAALLVLRALQGMPSLGLYLKCRACFSDPLPMLVRPLLQKLDPLGELSIGIRLVEGIVQSAVNSIMASVDTSLRLCESERLAKANRWLEFALAGVRGGQFPPSVLDRLFSHQEFLLAALGPPSPEPKSAEVVVRCFSKLAELSQT-MHGLLGPLQSIMRTYDSLLHKSEIAKAAKNKGIEV 975
The following BLAST results are available for this feature:
BLAST of NO02G03520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30319.11.500e-24655.09hypothetical protein Naga_100003g128 [Nannochlorop... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007006NSK007006Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03520.1NO02G03520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667914gene_940Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g128gene354Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03520.1NO02G03520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03520 ID=NO02G03520|Name=NO02G03520|organism=Nannochloropsis oceanica|type=gene|length=4072bp
GCGCTGACGTCCCCCTTTCGCATCTCCTCATGTTGTTTCTCCTTGCTTCT
CTTTACCCGGGGCCTAGTGTCTTGTTTCCGCCTGGACCTGCAGCCTACAC
ACTTTATCCTCCACAAACAAATATACTGACATGATCTTTTTACCCGTAGC
ACTACTCACCATGTACACCCTTGCCCAGGTTTACCCACCCTCTCCTGCTC
TTTTTTGCAGGCAGAAAGCGTGCCACTCGCCGTCTGCCCCTATAGCATGC
CCAGCACAAACCCCACAAAAACAACCCATGCATCACCAAATCCACAGTAA
TATGGCCATCGATGGCACATCTGGCCGGGTCACCCAGCGCAAGCGCAAGC
GCCCCTTACCGGCCTCCGACTCCTCGAAAAGCACCACGACAAACTCGGCG
CCGCAAAGAGGGGGTACGTGTCCCAAGTCGGCCTCCTTGTCGAGCAGTGC
CACCACCAACAGCCTCTCAGGCAATAAGAAACGAAGCCGCAGCAATACCA
CACACAATGGGATGTCTGGTGAAGGCGACGAGATGGCGGCCGAGGACCTG
GACGTCGACGAGGAGGACGGCGGCCGGGGCGCAGCTGCCTGCCTGGAGAG
CTCATTGACCTCAACAGCTGGAGGACACGGAGCCACAGGAAAGACCTTCA
CACGAGCCATCGACAAGCCCCGCGCACGATCTGAGATAGTACGACAGGTG
GAAAAGCTCGTGTCTAACATGTTCAAGGAGTTGGACGTGCTCTTGCGGGC
CGAAAACATAAACCGACGCGTTATGgtaagaccaccccgatcttttggaa
cggagggggggagcaaggaaggagggagggttacctcacaaaatgaattg
catacacactatcctgtaatcgcaagtgagttcatgagcattctatcctc
ccatacccctcccttctcttcatttagTACCGGTGGAGTGGCGCAGAACG
CAGCAGTTCCGGCGCCATAGGCGAGGGCAAGGCCAGCTACTGCACCTGGG
GCCGAGAGCTCATAAAGCAGTACATCGAAGACGCCATCGAGCTCGTCCGC
ACATCTCTCACTATGGGAGACTGGGACAATTCTGTGGAGGCTGCACGGCG
TTTGACACTGCAGTATTTAGGAAAAGCTGCCGATCGTTTCATCATTGAAA
ATGAGCCCGTGCTCCACGCCGAGGTCATGAACACGCTTGGCAACCTCTGG
TTCGCCCTTCTCCCCTATATGCCCCCTCCCCAACGCCATCAATTTCGCCG
CCTGGTCGCCCGCATCCGCAAAACCAACATCAGCAGCCGCAGCAGCAGAA
ACAACAAAGTTGGAAATGCGAGTTGCACCAGCACCGCAGCGGCCTGTACG
GGCATTCTGGCTAGCGGTGGTGCTTGGGGCGCTGTCAACCACAGCCTTGC
TCCTGCCGCTACCTGCGTAGACCCACAAGGACAGCAACTGGAGCTGCAGC
ACCCTGAGCCACCGCCGCCGCCGCAGCAGCAACAACACCTATACCAGCAT
CAACCGGAGCAACAGCAGCCGCAGCAGCAACGACAACAGCCACAACAACA
ACAGCATCACAGTGGGAGCCTTGCGGTCTCTTTTCGGTGTGCTTTGCAGT
TCGCAAAGCTGGACTTAAGCCCCGAGGCGTTAGCGGTGCAGGGCCCGCAT
GAAACACAGAACAAGCTAGCTGCTCTGTTGGTGTCGGATGTGTATGAATG
TGATGCATATATCTGTTTGTGGAAGGTATCGGAGGTTCTCGCGGGGTTGA
AGGATTTTCAGGTATTGTGTCAGGAATTTAGGCTCAAGGCCTTGGACGCG
GAGATGTGGCGATGCATGCTTTTGGAGGAGCAGGAGTCTCGGCAACGGGG
GGGAGGAGGCAGTGACGATGAGGATGATGAGGATGATTATGACAGTGAGG
AGGAGGAGGAAGAGGATGAGGAGGGTGGCAAGGCTGAAGTGGTGGATAAC
AAGGATCGATTAAGCATTAGCAAGCTTGCGACTATTCCGGGGATCATGGG
TATGAAAAAATTTGAGAACATGCAAATGATCTGTCAACACCGCTCCATCA
ACACCACGACCCGTTCTCGACCAACCGGCCCCTTCAACAACAATACCACC
ACCCTCACATCCACATCCTCCCCCGGCGATGTCGGCGAATATAACACGTG
CTGCAGTCCAAACCCCGCCTCTATCTCCCACATCCAACCGGTTCATCCTG
CCTCGTCCCCCGCTGTCATCGTCCTACCCACTACAACACCAGCAACTCTA
CCGAAGAAAACAGCAGCTGCTCCCTCTTCTAGGTTTTCCAATATTCGCCG
TTCTTCGGATCGGGAAGGACAAGAGAGTGGGTCCCGCGTGGCAGGAGCTG
AGCGGTGGCGCACTAAGGCGGCGTTGGAAGACGGGGAAGTGGACCAATAC
ATGGATTTTATGAGCTTGCATCAGCATGAGTACCGAAGGGTGGTAACACC
TGATTTTTTATTCCGTGTACGGACTTTTTTAGAGGCTTTTGAGACAACTC
CAAGCGCTCTGCAGGACGGGAGAGATGGGATTAGAGGTACAAATATTGCT
GACGCAGCGGCGGCGCCGTCATTGTCGCCTTCGAGCTTGCTCTTCGTGAG
GTCGCGACCGTTTTTATACCGCGTTGCTACTATTATCCCGACGGGACAGC
TAGACGGGTACCTTGACTTGTTATCGTCTAAAATCGGCTTTCAAGCCACA
CTTCTCCTTCTTGAGCCTCTGCTGATGGACGAACAAGAGATCTTTTCCAC
GGGTCGAGTCACCCAGGCGTTGGAATGGGCGATAAACCATGAGGAAGGAA
GGTACTTGGCAGTCTTCTCTCGCCTCATCCTCCCCCGTATCCAGTCCCGC
ACGCAGCTTGAGCGGATTGCCTGTCATGCCGTGGTCTATGGGCAAGCCTC
CCTCGCTGTCATCGATCGGGCTTTGGCGCGTGTTCCCAGAAAGAACTACG
AGGGTATGGCCCTCAATCTGTGTCGGCGGGCAGTGCAAAACTGGGGACCT
GGTACCCGTGGCGTGCATTTGATGGTACTTCGTGCACTGCAGGGCATGCC
TAGCCTGGGTTTGTACCTCAAGTGCCGTGGCTGTTTCTCGGACCCGTTGC
CAACGTTGGTCCGCCCCCTCCTTCATCAGCTCGACCCTATGGGCGAGCTT
TCGATTGGTATTCGCCTCGTGGAAGGCGTTGTCCAGTCGGCTGTCAAATC
TATTGTGGCCTCGTTGGAAGCCAGCAGTGAGGGACCCGAGCGTCTCGCGA
AGGCTAAGAGGTGGATGGATTTTGCCTTCGCCGGTGTTCGAGGTGGACAG
TTCCCGCCGTGTGTGTTGGAGCGTTTGTTTTCAAATCAGATTTTTTTACT
TGCTGCGTTGGGGCCGCCGTCGGCGGACATAAGTTGTGTGGAGGCGGTGG
CTGGTTGCTTTTCGAAGCTTGCGGAGTTGAGCAGGACTCATTCTACTGCT
ATTGCTGGGCCGGTGCAGGCGATAATGAACACCTACACTACCCATCCGCA
AAAGCACTTGATTTGGAAGGCAGCGAATGAAAAGGGGATTGAAGTGGCCG
CTTGAGTGAGTGAGTGGGAATGTGTGAATAGTAATGGAAATATGAGGAAG
AGACAGCCGCATTTTGTCGCCTCGCGTGCTGCTATGTGGATGAGAAGAGA
GAGAAGGGAGAGAATGAGAAAAGGATAAAGCATGCAGACTTGTCTCTTGA
TGACCATGCCTTGTTTGTTTTGTTGTGTACCATAGTGTCTTCTTGTCGCG
GGTAAAATAACGTCAATATCATTCTCCACGCAGACATATGTGTCTTCCGT
CGCGTAATTTTGTGCATGCATGGGTTCTGATCTAGTCCATGCTTGTAAAA
ATTCGAATCGAAAGTGGAAAGATGAGATTGATTGGAATTAAAGGAACCAA
TAATCGTGTGGTGAGGGTAAGAAATAACACCAAGCAAGAGTAGAATGTGC
AAATGAGGACTGCCGTTTAAGGAGACAGACTCACGACCTAGGTTTCCACT
ATATGCGTGAGAGATATGCCACCTGTATTAAAAAAGCAGTGAACAATGAA
AAGCTACTCGCTCTATGTTGGA
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protein sequence of NO02G03520.1

>NO02G03520.1-protein ID=NO02G03520.1-protein|Name=NO02G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1091bp
MIFLPVALLTMYTLAQVYPPSPALFCRQKACHSPSAPIACPAQTPQKQPM
HHQIHSNMAIDGTSGRVTQRKRKRPLPASDSSKSTTTNSAPQRGGTCPKS
ASLSSSATTNSLSGNKKRSRSNTTHNGMSGEGDEMAAEDLDVDEEDGGRG
AAACLESSLTSTAGGHGATGKTFTRAIDKPRARSEIVRQVEKLVSNMFKE
LDVLLRAENINRRVMYRWSGAERSSSGAIGEGKASYCTWGRELIKQYIED
AIELVRTSLTMGDWDNSVEAARRLTLQYLGKAADRFIIENEPVLHAEVMN
TLGNLWFALLPYMPPPQRHQFRRLVARIRKTNISSRSSRNNKVGNASCTS
TAAACTGILASGGAWGAVNHSLAPAATCVDPQGQQLELQHPEPPPPPQQQ
QHLYQHQPEQQQPQQQRQQPQQQQHHSGSLAVSFRCALQFAKLDLSPEAL
AVQGPHETQNKLAALLVSDVYECDAYICLWKVSEVLAGLKDFQVLCQEFR
LKALDAEMWRCMLLEEQESRQRGGGGSDDEDDEDDYDSEEEEEEDEEGGK
AEVVDNKDRLSISKLATIPGIMGMKKFENMQMICQHRSINTTTRSRPTGP
FNNNTTTLTSTSSPGDVGEYNTCCSPNPASISHIQPVHPASSPAVIVLPT
TTPATLPKKTAAAPSSRFSNIRRSSDREGQESGSRVAGAERWRTKAALED
GEVDQYMDFMSLHQHEYRRVVTPDFLFRVRTFLEAFETTPSALQDGRDGI
RGTNIADAAAAPSLSPSSLLFVRSRPFLYRVATIIPTGQLDGYLDLLSSK
IGFQATLLLLEPLLMDEQEIFSTGRVTQALEWAINHEEGRYLAVFSRLIL
PRIQSRTQLERIACHAVVYGQASLAVIDRALARVPRKNYEGMALNLCRRA
VQNWGPGTRGVHLMVLRALQGMPSLGLYLKCRGCFSDPLPTLVRPLLHQL
DPMGELSIGIRLVEGVVQSAVKSIVASLEASSEGPERLAKAKRWMDFAFA
GVRGGQFPPCVLERLFSNQIFLLAALGPPSADISCVEAVAGCFSKLAELS
RTHSTAIAGPVQAIMNTYTTHPQKHLIWKAANEKGIEVAA*
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Synonyms
Publications