NO02G03210, NO02G03210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03210 vs. NCBI_GenBank
Match: PSC73370.1 (Elongation factor P [Micractinium conductrix]) HSP 1 Score: 209.1 bits (531), Expect = 1.400e-50 Identity = 114/215 (53.02%), Postives = 144/215 (66.98%), Query Frame = 0 Query: 21 SPLPALPLVRVVQR---RNNAQRQIIVALT-SNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTA-QGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 +P LPL R QR R Q+ A T SND KNG+ IE+DG P +VVEFLHVKPGKG+AFVRSKLKN I+G T+EKT+RAGE V+ ASV K + QF+Y +G+ Y FM++++YE + K + +L EGM V + WN + I VE+P EVVETDP KGNTA GGSKPA L +GA + VP+FI GE+IKVDTR +Y+ R Sbjct: 7 APRAVLPLQRPAQRLVARQRGALQVRAASTSSNDFKNGMTIEMDGAPYKVVEFLHVKPGKGSAFVRSKLKNFITGNTVEKTWRAGEPVDLASVEKKETQFTYAEGDEYVFMDMQSYEETRITK----DEDWAKYLKEGMDVGVLLWNGKVISVEVPNTVELEVVETDPGVKGNTAGSGGSKPATLETGAVIQVPLFISTGERIKVDTRTDSYLQR 217
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_096691586.1 (MULTISPECIES: elongation factor P [Calothrix] >BAZ15994.1 translation elongation factor P [Calothrix sp. NIES-4071] >BAZ62139.1 translation elongation factor P [Calothrix sp. NIES-4105]) HSP 1 Score: 208.8 bits (530), Expect = 1.900e-50 Identity = 103/185 (55.68%), Postives = 138/185 (74.59%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G++I LDG+ RVVEFLHVKPGKGAAFVR+KLKN SG T+E+TFRAGE+V +A++ K MQ +Y +G+ Y FM++ETYE + TA ++ +L EGM + +WNE+ +DVELP + + EV ETDP KG+TA GGSKPAKL +GATV VP+FI GE+I++DTRE Y+ R Sbjct: 2 ISSNDFRPGVSIVLDGSVWRVVEFLHVKPGKGAAFVRTKLKNAQSGNTVERTFRAGETVPQANLEKSTMQHTYKEGDEYVFMDMETYEEGRL--TAQQIGDKVKYLKEGMEANVVRWNEQVLDVELPNSVVLEVTETDPGVKGDTATGGSKPAKLETGATVMVPLFIAQGERIRIDTREDKYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_099534808.1 (elongation factor P [Limnothrix sp. PR1529] >OCQ93045.1 elongation factor P [Limnothrix sp. P13C2] >PIB04913.1 elongation factor P [Limnothrix sp. PR1529]) HSP 1 Score: 208.4 bits (529), Expect = 2.400e-50 Identity = 102/185 (55.14%), Postives = 138/185 (74.59%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G+ IELD RVVEFLHVKPGKGAAFVR+KLKN+ +G+ +E+TFRAGE+V +A++ K DMQ +Y DGE Y FM+++TYE ++ +A ++ +L EGM Q+ WN + I+V+LP + EVVETDP KG+TA GG KPAKL +GATV VP+FI VGEK+++DTRE Y+ R Sbjct: 2 ISSNDFRPGVTIELDNGVWRVVEFLHVKPGKGAAFVRTKLKNVQTGSVVERTFRAGETVPQATLEKSDMQHTYMDGEQYVFMDMKTYEEMNI--SAAQIGDRVKYLKEGMEAQVVTWNGKVIEVDLPNTVVLEVVETDPGVKGDTATGGQKPAKLETGATVMVPLFISVGEKLRIDTREDKYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: OKY70686.1 (elongation factor P [Limnothrix sp. CACIAM 69d]) HSP 1 Score: 207.6 bits (527), Expect = 4.200e-50 Identity = 102/185 (55.14%), Postives = 137/185 (74.05%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G+ IELD RVVEFLHVKPGKGAAFVR+KLKN +G+ +E+TFRAGE+V +A++ K DMQ +Y DGE Y FM+++TYE ++ +A ++ +L EGM Q+ WN + I+V+LP + EVVETDP KG+TA GG KPAKL +GATV VP+FI VGEK+++DTRE Y+ R Sbjct: 2 ISSNDFRPGVTIELDNGVWRVVEFLHVKPGKGAAFVRTKLKNAQTGSVVERTFRAGETVPQATLEKSDMQHTYMDGEQYVFMDMKTYEEMNI--SAAQIGDRVKYLKEGMEAQVVTWNGKVIEVDLPNTVVLEVVETDPGVKGDTATGGQKPAKLETGATVMVPLFISVGEKLRIDTREDKYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_011430134.1 (MULTISPECIES: elongation factor P [Synechococcus] >Q2JUZ8.1 RecName: Full=Elongation factor P; Short=EF-P >ABC99454.1 translation elongation factor P [Synechococcus sp. JA-3-3Ab] >PIK85226.1 elongation factor P [Synechococcus sp. 63AY4M2] >PIK88479.1 elongation factor P [Synechococcus sp. 65AY6A5] >PIK92910.1 elongation factor P [Synechococcus sp. 65AY6Li] >PIK94263.1 elongation factor P [Synechococcus sp. 60AY4M2] >PIK98845.1 elongation factor P [Synechococcus sp. 63AY4M1] >PIL00440.1 elongation factor P [Synechococcus sp. 65AY640]) HSP 1 Score: 206.5 bits (524), Expect = 9.300e-50 Identity = 97/185 (52.43%), Postives = 138/185 (74.59%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SNDL+ G+++E+DG P +V+EFLHVKPGKGAAFVR+KLKN+ +G +EKTFRAGE + A++ K++MQ+ Y +G+ + FM++ETY E P +A + +L E M V I +W + IDVELP + EVVETDP +G+TA GG+KPAKL +GA + VP+FI+VGE+++VDTR TY+ R Sbjct: 2 ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGEMLPAATIEKVNMQYLYSEGDNFVFMDMETY--EQAPLSAAQIGSAVKYLKENMEVAILRWKGQVIDVELPNTVVLEVVETDPGVRGDTATGGTKPAKLETGAEIQVPLFIKVGERVRVDTRTDTYIGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: OUC15020.1 (elongation factor P [Alkalinema sp. CACIAM 70d]) HSP 1 Score: 206.5 bits (524), Expect = 9.300e-50 Identity = 100/185 (54.05%), Postives = 139/185 (75.14%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G++IELDG RVVEFLHVKPGKGAAFVR+KLKN+ +G +E+TFRAGE+V +A++ K MQ +Y DG+ Y FM++ETY+ + TA ++ +L EGM V + KW ++ ++VELP + + EV+E DP KG+TA GG+KPAK+ +GATV VP+FI VGEKI+VDTR+ Y+ R Sbjct: 2 ISSNDFRPGVSIELDGAVWRVVEFLHVKPGKGAAFVRTKLKNVQTGGVVERTFRAGETVPQATLEKSTMQHTYKDGDEYVFMDMETYDEGRL--TAAQIGDRVKYLKEGMEVDVVKWGDKVMEVELPNSVVLEVIEADPGVKGDTATGGTKPAKVETGATVMVPLFISVGEKIRVDTRDDKYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: AFK47180.1 (unknown [Lotus japonicus]) HSP 1 Score: 206.1 bits (523), Expect = 1.200e-49 Identity = 107/227 (47.14%), Postives = 152/227 (66.96%), Query Frame = 0 Query: 5 ALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQI-IVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 +L+ + +S AS+ +S P+ P + ++ ++ R I ALTSND+K G N+E+DG P RV+EFLHVKPGKGAAFVR+KLKN ++G T++KTFRAG S+E+A ++K QF+Y DG + FM+L +YE + + + +L EGM I WN + ID++LP VV+ DP KG+TAQGGSKP L++GA V VP+F+ VG++I VDTR Y+SR Sbjct: 4 SLSASSSSLRFASSSYSSFPSNPSLLPMRNPSSKPRFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYLTGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMDLNSYEEVRLDEKDIGDRTK--WLKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDPGLKGDTAQGGSKPTTLDTGAVVNVPLFVNVGDEILVDTRNGVYMSR 228
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_106867972.1 (MULTISPECIES: elongation factor P [unclassified Cyanobacteria (miscellaneous)] >PSN13982.1 elongation factor P [filamentous cyanobacterium CCT1] >PSN79935.1 elongation factor P [filamentous cyanobacterium CCP4]) HSP 1 Score: 206.1 bits (523), Expect = 1.200e-49 Identity = 104/185 (56.22%), Postives = 135/185 (72.97%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G +IELDG+ RVVEFLHVKPGKG+AFVR+KLKN+ +G T+EKTFRAGE+V +A + K DMQ +Y DGE FM++ETY E V TA +Q +L E M V + WN + ++VELP + + EV +TDP KG+TA GG+KPA L +GA V VP+FI +GEKIKVDTR TY+ R Sbjct: 2 ISSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVKTGNTVEKTFRAGETVPQAVIEKKDMQHTYRDGEDLVFMDMETY--EEVRLTADEIGSQVKYLKEEMAVSVVSWNGQILEVELPNSIVLEVTQTDPGVKGDTATGGTKPAILETGAQVMVPLFISIGEKIKVDTRTDTYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: EPS70706.1 (hypothetical protein M569_04054, partial [Genlisea aurea]) HSP 1 Score: 205.7 bits (522), Expect = 1.600e-49 Identity = 100/188 (53.19%), Postives = 133/188 (70.74%), Query Frame = 0 Query: 43 IVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 + AL+SND+K GLNIE+DGTP RV+EFLHVKPGKGAAFVR+ L+N ++G +EKTFRAG +EEA + K QF+Y DG Y FM+L TYE + + ++ +L EGM + W ++ ID ELP +VVE DP +G+TAQGGSKPA +++GA V VP+FIE+GE+I +DTR Y+SR Sbjct: 29 VYALSSNDIKVGLNIEVDGTPWRVIEFLHVKPGKGAAFVRTTLRNYVTGNQVEKTFRAGSKIEEADISKQTKQFTYKDGSQYVFMDLSTYEEYRLNEA--DVGDKTKWLKEGMDCNLLFWKDKVIDFELPTTVRLKVVEVDPGIRGDTAQGGSKPATVDTGAVVNVPLFIEIGEEILIDTRNGQYMSR 214
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_011141285.1 (elongation factor P [Gloeobacter violaceus] >NP_924231.1 elongation factor P [Gloeobacter violaceus PCC 7421] >Q7NL41.1 RecName: Full=Elongation factor P; Short=EF-P >BAC89226.1 elongation factor P [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 205.7 bits (522), Expect = 1.600e-49 Identity = 101/186 (54.30%), Postives = 135/186 (72.58%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGE-AYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G IELDG RV+EFLHVKPGKG+AFVR+KLKN+++G E+TFRAGE++ +A V K DMQF Y G+ Y FM++E+YE E++ + +L EGM V I KW ER I V+LP + +VVETDP KG+TAQGG+KPAK+ +GA V VP+FI +GEKIK+DTR+ +Y+ R Sbjct: 2 ISSNDFRTGTTIELDGQVWRVIEFLHVKPGKGSAFVRTKLKNVMTGNVNERTFRAGETLPQAVVEKRDMQFVYPQGDNEYVFMDMESYEQEALTRETLGDG--AKYLKEGMSVSILKWQERVIGVDLPNTVVLQVVETDPGVKGDTAQGGTKPAKVETGAEVMVPLFITIGEKIKIDTRDNSYLGR 185 The following BLAST results are available for this feature:
BLAST of NO02G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03210 ID=NO02G03210|Name=NO02G03210|organism=Nannochloropsis oceanica|type=gene|length=4999bpback to top protein sequence of NO02G03210.1 >NO02G03210.1-protein ID=NO02G03210.1-protein|Name=NO02G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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