NO02G02560, NO02G02560 (gene) Nannochloropsis oceanica

Overview
NameNO02G02560
Unique NameNO02G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1524
Alignment locationchr2:715240..716763 +

Link to JBrowse

Properties
Property NameValue
DescriptionSnurportin-1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:715240..716763 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0061015snRNA import into nucleus
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Homology
BLAST of NO02G02560 vs. NCBI_GenBank
Match: CCI44478.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-49
Identity = 120/381 (31.50%), Postives = 187/381 (49.08%), Query Frame = 0
Query:  125 QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIY---SEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDDVVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKLLFHARAKKGIREGGTAVTFDTLLQAVERPVQKEVREESNDV 503
            ++Y+ QF IPEWM++IP DL+G  ST  G GW+V+PRPEGKRCL++A+ G+TV R  NG  L +FPS LPNGS +     +G+ +LDCIY   ++    ++VLD++CW+   LY+CT EFR + LR K  E                             Y   P+P FECD  GL +AY     +++DGLLF  K ++ E+G SP   +WKD   SR+ +                       +K        +    +TL+ +VL   T+E+ +     ++++G                               L G+QF R+CS +RA+ D+W+K++F   A+ G       V+ D +++ +       + +ES+D+
Sbjct:   79 EYYSRQFMIPEWMIEIPTDLDGKGST-TGEGWYVLPRPEGKRCLVIANNGVTVARKTNGSTLQKFPSGLPNGSKKTSSHSEGYCILDCIYQSNADDQGVFYVLDVMCWKGYLLYNCTTEFRLYWLREKLTE------------------GNAAIRTPANPYPFLPIPCFECDIGGLEKAYKTSFQYIKDGLLFMMKAAHYELGLSPCSTVWKDTHTSRFLV---------------------FTEKPIIVLALNNQRQCATLEGIVL--YTIEDADVLAQYELREG------------DLVQFSFEHNVYTPDQSPSLSGMQFMRRCSPQRALPDSWTKVVFQYNARFG------GVSIDDIVKTITS--SGNMTDESHDI 397          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_011624903.1 (snurportin-1 isoform X2 [Amborella trichopoda] >XP_020525469.1 snurportin-1 isoform X2 [Amborella trichopoda] >ERN09958.1 hypothetical protein AMTR_s00013p00200700 [Amborella trichopoda])

HSP 1 Score: 204.9 bits (520), Expect = 5.900e-49
Identity = 118/314 (37.58%), Postives = 172/314 (54.78%), Query Frame = 0
Query:   33 SAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQ-FYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK---GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343
            S ++ RR   L+RQ   RR+   + R L S  +D   P  ET    S+ +   EE      + ++E G   S +  D   A    ++RG +A+ +++ Q  +PEWM+D+P  L+          W+V+PRP GKRCL+V+S G TV+RL NG +LH FPS+LPNG+ R K   GP   + +LDCI+ E  +TY+V+D++CW+   LYDC+ EFRFF + SK  E                             Y    +P + CD  GL+ AY   +PF +DGLLF++K ++   G +PL L+WKDM CS+YFL
Sbjct:   15 SDQQKRRELALRRQSVNRRDSQLHARRLASALLDNSPPPQETLTLISQPEIQQEEI---EELVVEESGEVSSHKGIDVLEA---SKLRGSKARHWFSKQLMLPEWMIDVPSRLS--------HDWYVLPRPAGKRCLVVSSNGTTVSRLRNGSILHHFPSSLPNGA-RIKDIAGPAHMYCILDCIFHEPDQTYYVIDMICWKGYSLYDCSSEFRFFWVNSKLTE-----------------TGACDTPSFYHKYRFSLVPVYHCDQMGLQAAYEGNSPFSKDGLLFYNKHAHYHTGITPLALVWKDMNCSQYFL 296          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_006848377.2 (snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525466.1 snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525467.1 snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525468.1 snurportin-1 isoform X1 [Amborella trichopoda])

HSP 1 Score: 204.9 bits (520), Expect = 5.900e-49
Identity = 118/314 (37.58%), Postives = 172/314 (54.78%), Query Frame = 0
Query:   33 SAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQ-FYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK---GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343
            S ++ RR   L+RQ   RR+   + R L S  +D   P  ET    S+ +   EE      + ++E G   S +  D   A    ++RG +A+ +++ Q  +PEWM+D+P  L+          W+V+PRP GKRCL+V+S G TV+RL NG +LH FPS+LPNG+ R K   GP   + +LDCI+ E  +TY+V+D++CW+   LYDC+ EFRFF + SK  E                             Y    +P + CD  GL+ AY   +PF +DGLLF++K ++   G +PL L+WKDM CS+YFL
Sbjct:   15 SDQQKRRELALRRQSVNRRDSQLHARRLASALLDNSPPPQETLTLISQPEIQQEEI---EELVVEESGEVSSHKGIDVLEA---SKLRGSKARHWFSKQLMLPEWMIDVPSRLS--------HDWYVLPRPAGKRCLVVSSNGTTVSRLRNGSILHHFPSSLPNGA-RIKDIAGPAHMYCILDCIFHEPDQTYYVIDMICWKGYSLYDCSSEFRFFWVNSKLTE-----------------TGACDTPSFYHKYRFSLVPVYHCDQMGLQAAYEGNSPFSKDGLLFYNKHAHYHTGITPLALVWKDMNCSQYFL 296          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_008616454.1 (hypothetical protein SDRG_12171 [Saprolegnia diclina VS20] >EQC30111.1 hypothetical protein SDRG_12171 [Saprolegnia diclina VS20])

HSP 1 Score: 203.8 bits (517), Expect = 1.300e-48
Identity = 114/306 (37.25%), Postives = 166/306 (54.25%), Query Frame = 0
Query:   35 REHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRY 341
            +E RR   + RQR ARR+LT ++R +   ++     GA+           LE+   G  M ++   A+   +  ++       RV+G+++  Y++Q   PEWMVDIP  LNG      G GW V+PRP+GKRCL++A+ G T+ R  +G VL +FPSALP+GS + K   D + +LDCI+++   T+++LD++CW+   LYDCT EFRF+ L+ K  E    S                        +  +P+PYF+C   GL  AY     F +DGLLF+ K     +G SPLVLLWKD   S Y
Sbjct:   19 QERRRQDAIARQRQARRDLTMHVREMAIPSV-----GAD-----------LEDITAGLDMDIEVSSAKSRKKTRED-------RVKGRRS-IYSNQLMHPEWMVDIPNALNG-THAGNGEGWLVLPRPDGKRCLVIAANGTTIARTHSGSVLKKFPSALPSGSRKTKYGADQYCVLDCIFNDVDGTFYILDVMCWKGYLLYDCTAEFRFYWLQDKLSETSAVS------------------ISSANPFAFQPIPYFDCTPEGLSTAYHGAFSFSKDGLLFYCKAGVYTLGLSPLVLLWKDATTSPY 281          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: OQR81202.1 (snurportin-like protein [Achlya hypogyna])

HSP 1 Score: 203.4 bits (516), Expect = 1.700e-48
Identity = 130/427 (30.44%), Postives = 195/427 (45.67%), Query Frame = 0
Query:   35 REHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDDVVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKL 462
            +E RR   + RQR ARR+LT ++RA+   +I+     A+  +  +  D  +E T   +     E                   RV+G++ + Y +Q S PEWMVDIP  LNG      G GW+V+PRP+GKRCL++A+ G T+ R  +G VL +FPSALP+GS +     D + +LDCI+SE+  T+ +LD++CW+   LYDCT EFRF+ L+ K  E    +                        Y    +PYF+C   G++ AY     F +DGLLF+ K     +G SPLVLLWKD   S Y                             G+         +TL ++V+G      V++       +G                                 G+ F ++CS++R +AD+W+K+
Sbjct:   19 QERRRQDAIARQRQARRDLTMHVRAMAVPSIE-----ADLEDITASMDMDVEVTSTKSRKKTRE------------------DRVKGRR-EIYCNQLSHPEWMVDIPSQLNG-TCIGNGEGWYVLPRPDGKRCLVIAANGSTIARTQSGSVLKKFPSALPSGSRKTSCGTDQYCVLDCIFSESEGTFHILDVMCWKGYLLYDCTAEFRFYWLQDKLSETKAMT------------------VTTANPYAFHAVPYFDCTPEGIQTAYHGAFAFEKDGLLFYCKAGIYALGLSPLVLLWKDPHTSPY---------PSQMTIVLQVDELLQCVTLDGKILATLALDFATLHEIVVGDLLRFSVDSMSWSTTSEG--------------------------DVVVDAQGVHFQKRCSAQRGIADSWTKI 367          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_021302556.1 (snurportin-1 [Sorghum bicolor] >KXG21235.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor] >KXG21236.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor] >KXG21237.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor])

HSP 1 Score: 203.0 bits (515), Expect = 2.200e-48
Identity = 98/226 (43.36%), Postives = 134/226 (59.29%), Query Frame = 0
Query:  119 VRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR-AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343
            +RG  A +++A Q  +PEWMVD P     HLST+    W V  RP GKRCL+V+S G+T++R+ NG +LHRFPSALPNGS R   GP   +++LDCI+ E   TY+++D++CWR   LYDCT EFRFF + SK  E                             Y    LP +EC   GL+ AY    P+V+DGLLF++K ++ + G +PL L+WKD  CS+Y +
Sbjct:   92 LRGADARRWFARQIMLPEWMVDAP----PHLSTD----WHVFARPSGKRCLVVSSNGMTISRVRNGSILHRFPSALPNGSKRDISGPASSYSILDCIFHEPDETYYIIDMICWRGYSLYDCTAEFRFFWVNSKIAETSAGDPPSTYHR-----------------YRFSALPVYECTLEGLQAAYSGSMPYVKDGLLFYNKHAHYQAGITPLALVWKDETCSQYVI 292          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: OQR94383.1 (snurportin [Thraustotheca clavata])

HSP 1 Score: 202.2 bits (513), Expect = 3.800e-48
Identity = 111/321 (34.58%), Postives = 168/321 (52.34%), Query Frame = 0
Query:   20 RIPPKQKAASAYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRY 341
            R+   ++   +   ++E RR   + RQR AR +LT  +RA+   +I+ +                LE+   G  M ++  G++   +  ++       RV+ +++  Y +Q   PEWMVDIP  LNG  +   G GWFV+PRP+GKRCL++AS G T+ R ++G +L +F S LPNGS +    ++ + +LDCI++E    ++VLD++CW+   LYDCT EFRF+ L+ K  E                             Y   P+PY++C   GL+ AY     F +DGLLF+ K     +G SPLVLLWKD   S Y
Sbjct:  543 RVKGWKRLGRSVDESQERRRQDAISRQRQARLDLTMQVRAMALPSIESD----------------LEDITAGIEMEIEVSGSKSRKKTRED-------RVKARRS-IYCNQLMHPEWMVDIPNQLNG-TAIGNGEGWFVLPRPDGKRCLVIASSGTTIARTLSGSILKKFSSKLPNGSRKTSSSQESYCVLDCIFNENDEKFYVLDVMCWKGYLLYDCTAEFRFYWLQDKLSETAA------------------GEVAPGNPYPFTPVPYYDCTPQGLQTAYHGIYYFAKDGLLFYCKAGLYNLGLSPLVLLWKDATTSPY 820          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_010677883.1 (PREDICTED: snurportin-1 [Beta vulgaris subsp. vulgaris] >KMT11193.1 hypothetical protein BVRB_5g110300 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.8 bits (512), Expect = 5.000e-48
Identity = 118/316 (37.34%), Postives = 169/316 (53.48%), Query Frame = 0
Query:   30 AYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK--GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343
            A  S ++ RR   L RQ+  R +     R L S  +   +P   T    S  D +LE   D  P   ++G      +  + K      R+RG+++ +++A Q  +PEWM+DIP     HL +++   WFV+ RP GKRC +V+  G TV+RL NG VLH FPSALPNG+   +  G    +++LDCI+ E  +TY+V+D++CWR   LYDC  EFRFF L SK  E                             Y   P+P + CD +GL  AY    P+V+DGLLF++KQ+  + G +PL L+WKD KCS+Y +
Sbjct:   13 AAISDQQKRREVSLLRQQQNRLDAQSQARRLASTLLSFHQP---TPTSSSSYDASLE--FDIEPEYEEDG-----AEVDNIKDVRQASRLRGQESRRWFARQLMLPEWMIDIP-----HLLSQD---WFVLARPAGKRCFVVSINGTTVSRLRNGSVLHHFPSALPNGARTRENSGSSQSYSILDCIFHEMDQTYYVIDMVCWRGYSLYDCNAEFRFFWLNSKLSES-----------------GACEPPSHYHKYQFSPVPVYNCDQSGLLSAYTGQVPYVKDGLLFYNKQANYQAGNTPLTLVWKDDKCSQYVI 293          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_009406330.1 (PREDICTED: snurportin-1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 201.4 bits (511), Expect = 6.500e-48
Identity = 147/459 (32.03%), Postives = 205/459 (44.66%), Query Frame = 0
Query:   16 PQMRRIPPKQKAASAYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALE-ETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR--AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDD--VVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKLLFHARAK 469
            PQ  R P K+       S ++ RR   L RQ   R +     R L S+ +        +  + +  D A+E E       A  E     S     +       ++RG++A +++A Q  +PEWM+DIP     HL  +    W+V  RP G RC +V+S G T++RL NG VLH FPS+LPNGS      GP   + +LDCI+ E ++TY+V+D++CWR   LYDCT EFRFF L SK  E                             Y    +P ++CD  GL  AY    P+V+DGLLF++K ++ + G +PL L+WKD  CS YFL                      V     +DG      L+T DD  VVLG    + +   GL      RAG                            + GLQF  K +  RA AD++SK+ F   A+
Sbjct:    3 PQDGRRPIKRST----VSDQQRRRELALVRQAQQRSDSQNRARRLASSVL-----ALHSSPEPALPDDAIEPEQAPEVDWAQTEADLTESEALVRDLNVAQASKLRGREARRWFAHQLMLPEWMIDIP----PHLDRD----WYVFARPAGNRCFVVSSNGTTISRLRNGSVLHHFPSSLPNGSRTRDMSGPASSYCILDCIFHEPNQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAES-----------------GACNPPSTYHRYTFSVVPIYDCDQAGLHAAYSSVVPYVKDGLLFYNKHAHYQTGNTPLALVWKDNYCSEYFL---------DTDSKGLVPTQQQVVLEIQDDGR-----LTTSDDPPVVLGCVEADFIQKSGL------RAG--------NLLRFAIRDESVSLVDGKLEIGGLQFVSKANRARAFADSYSKVFFQYAAR 399          
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_004967897.1 (snurportin-1 [Setaria italica] >XP_012701729.1 snurportin-1 [Setaria italica] >KQL03981.1 hypothetical protein SETIT_001629mg [Setaria italica])

HSP 1 Score: 201.1 bits (510), Expect = 8.500e-48
Identity = 95/227 (41.85%), Postives = 136/227 (59.91%), Query Frame = 0
Query:  118 RVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR-AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343
            ++RG +A +++A Q  +PEWMVD P     HL+++    W V  RP GKRCL+V+S G+T++R  NG +LHRFPSALPNGS R   GP   +++LDCI+ E  +TY+++D++CWR   LYDCT EFRFF + SK  E                             Y    +P +EC   GL+ AY    P+V+DGLLF++K ++ + G +PL L+WKD  CS+Y +
Sbjct:   85 KLRGSEARRWFARQIMLPEWMVDAP----PHLASD----WHVFARPSGKRCLVVSSNGMTISRARNGSILHRFPSALPNGSKRDISGPASSYSILDCIFHEPDQTYYIIDMICWRGYSLYDCTAEFRFFWVNSKLTETSAGDPPSTYHR-----------------YRFSAVPIYECTLEGLQAAYSGSTPYVKDGLLFYNKHAHYQAGITPLTLVWKDETCSQYVI 286          
The following BLAST results are available for this feature:
BLAST of NO02G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI44478.11.200e-4931.50unnamed protein product [Albugo candida][more]
XP_011624903.15.900e-4937.58snurportin-1 isoform X2 [Amborella trichopoda] >XP... [more]
XP_006848377.25.900e-4937.58snurportin-1 isoform X1 [Amborella trichopoda] >XP... [more]
XP_008616454.11.300e-4837.25hypothetical protein SDRG_12171 [Saprolegnia dicli... [more]
OQR81202.11.700e-4830.44snurportin-like protein [Achlya hypogyna][more]
XP_021302556.12.200e-4843.36snurportin-1 [Sorghum bicolor] >KXG21235.1 hypothe... [more]
OQR94383.13.800e-4834.58snurportin [Thraustotheca clavata][more]
XP_010677883.15.000e-4837.34PREDICTED: snurportin-1 [Beta vulgaris subsp. vulg... [more]
XP_009406330.16.500e-4832.03PREDICTED: snurportin-1 [Musa acuminata subsp. mal... [more]
XP_004967897.18.500e-4841.85snurportin-1 [Setaria italica] >XP_012701729.1 snu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006902NSK006902Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02560.1NO02G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550078gene_846Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g47gene258Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02560.1NO02G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02560 ID=NO02G02560|Name=NO02G02560|organism=Nannochloropsis oceanica|type=gene|length=1524bp
ATGATGCATCGACCGCCATACAAGCATGCTGCCCCATCCCAGCAGCCGCA
GATGCGGCGGATACCACCCAAGCAGAAAGCAGCCAGCGCTTATACCTCGG
CGCGCGAGCATCGACGTGCAGCCGTCTTACAGCGGCAGCGGGCGGCGCGG
AGAGAATTGACATACAATCTGCGGGCCTTAATCAGCAATGCAATAGACAA
AGAGGAGCCTGGGGCCGAGACAGGGGAGGACGACTCGAGGCAAGACCAAG
CCTTGGAGGAAACGTGCGACGGCGCACCTATGGCAATGGACGAAGGGGGA
GCGCAAGGGTCAACCCAATATTTTGATGAAAAAGGAGCGCATCCAAACAA
ACGGGTGCGGGGTAAGCAGGCCCAATTTTATGCCAGCCAGTTTTCCATCC
CAGAATGGATGGTAGATATTCCCCGAGATTTAAACGGACACCTCTCGACT
GAAGAAGGAGGAGGTTGGTTCGTCATGCCACGCCCGGAGGGGAAACGATG
CCTGATGGTGGCTTCGGGCGGAATCACCGTGACACGGCTGATGAATGGGG
AGGTGCTCCATCGATTTCCATCCGCCTTGCCCAACGGTTCACCACGCGCC
AAGGGTCCCAAAGATGGGTGGACGTTGCTTGATTGCATTTATTCGGAGGC
GAGCCGGACGTACTTTGTGCTGGATTTGCTGTGCTGGCGGAAGATGGAAC
TTTATGACTGTACGTGTGAGTTTCGTTTTTTTATACTGCGATCCAAATTT
GAGGAGGAACTGGGAAGGTCTGGAGCAGGAGGAGGAGCAGGAGGAGCAGG
AGGAGCAGGAGGAGCAGGAGGAGGAGCAGAAGCAGCAGGAGGGTACCTTT
TGGAGCCTTTGCCCTACTTCGAATGTGATTCTAACGGCCTACGACGCGCG
TATGGTGATTACGCTCCCTTTGTTCGGGATGGGTTGCTGTTTTGGAGTAA
GCAGAGCTACGTTGAGATAGGCCCGAGTCCGCTTGTATTGCTCTGGAAGG
ATATGAAATGCTCGCGGTACTTTCTTCGGGAAACACAACAACAGCAGCAG
CAGCAGCACCACCACCACCCACCATTAAGCTGTGTATTATTGGTGCAGAA
GGCAAAGGGTGAGGATGGGGAGAAGAGTGGATACGTTCTGAGCACACTGG
ACGACGTGGTCTTGGGCCGGACGACGCTGGAGGAGGTGAATGCGTGGGGC
CTCGGACAAGTGCAAGACGGAAGGGCGGGCGGAGAGAGAGAGGAAGAAGA
ACAAATGTTGATCCGATTTTGGTATGAAGGAGCAACGGAGGACGAGAAAA
ATAACCAGCAGCAGTTGCATGGGCTTCAGTTTGACAGGAAGTGCTCGTCG
AAGAGGGCGGTGGCTGATGCCTGGAGTAAGCTCCTGTTCCACGCTCGGGC
CAAGAAGGGGATAAGGGAGGGAGGGACGGCGGTGACGTTTGATACGTTGT
TGCAGGCGGTTGAGAGGCCTGTACAAAAGGAGGTGAGGGAGGAATCGAAT
GACGTCGAAGGGATGATGTGCTGA
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protein sequence of NO02G02560.1

>NO02G02560.1-protein ID=NO02G02560.1-protein|Name=NO02G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MMHRPPYKHAAPSQQPQMRRIPPKQKAASAYTSAREHRRAAVLQRQRAAR
RELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGG
AQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLST
EEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRA
KGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKF
EEELGRSGAGGGAGGAGGAGGAGGGAEAAGGYLLEPLPYFECDSNGLRRA
YGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLRETQQQQQ
QQHHHHPPLSCVLLVQKAKGEDGEKSGYVLSTLDDVVLGRTTLEEVNAWG
LGQVQDGRAGGEREEEEQMLIRFWYEGATEDEKNNQQQLHGLQFDRKCSS
KRAVADAWSKLLFHARAKKGIREGGTAVTFDTLLQAVERPVQKEVREESN
DVEGMMC*
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Synonyms
Publications