NO02G02560, NO02G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02560 vs. NCBI_GenBank
Match: CCI44478.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 207.2 bits (526), Expect = 1.200e-49 Identity = 120/381 (31.50%), Postives = 187/381 (49.08%), Query Frame = 0 Query: 125 QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIY---SEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDDVVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKLLFHARAKKGIREGGTAVTFDTLLQAVERPVQKEVREESNDV 503 ++Y+ QF IPEWM++IP DL+G ST G GW+V+PRPEGKRCL++A+ G+TV R NG L +FPS LPNGS + +G+ +LDCIY ++ ++VLD++CW+ LY+CT EFR + LR K E Y P+P FECD GL +AY +++DGLLF K ++ E+G SP +WKD SR+ + +K + +TL+ +VL T+E+ + ++++G L G+QF R+CS +RA+ D+W+K++F A+ G V+ D +++ + + +ES+D+ Sbjct: 79 EYYSRQFMIPEWMIEIPTDLDGKGST-TGEGWYVLPRPEGKRCLVIANNGVTVARKTNGSTLQKFPSGLPNGSKKTSSHSEGYCILDCIYQSNADDQGVFYVLDVMCWKGYLLYNCTTEFRLYWLREKLTE------------------GNAAIRTPANPYPFLPIPCFECDIGGLEKAYKTSFQYIKDGLLFMMKAAHYELGLSPCSTVWKDTHTSRFLV---------------------FTEKPIIVLALNNQRQCATLEGIVL--YTIEDADVLAQYELREG------------DLVQFSFEHNVYTPDQSPSLSGMQFMRRCSPQRALPDSWTKVVFQYNARFG------GVSIDDIVKTITS--SGNMTDESHDI 397
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_011624903.1 (snurportin-1 isoform X2 [Amborella trichopoda] >XP_020525469.1 snurportin-1 isoform X2 [Amborella trichopoda] >ERN09958.1 hypothetical protein AMTR_s00013p00200700 [Amborella trichopoda]) HSP 1 Score: 204.9 bits (520), Expect = 5.900e-49 Identity = 118/314 (37.58%), Postives = 172/314 (54.78%), Query Frame = 0 Query: 33 SAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQ-FYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK---GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343 S ++ RR L+RQ RR+ + R L S +D P ET S+ + EE + ++E G S + D A ++RG +A+ +++ Q +PEWM+D+P L+ W+V+PRP GKRCL+V+S G TV+RL NG +LH FPS+LPNG+ R K GP + +LDCI+ E +TY+V+D++CW+ LYDC+ EFRFF + SK E Y +P + CD GL+ AY +PF +DGLLF++K ++ G +PL L+WKDM CS+YFL Sbjct: 15 SDQQKRRELALRRQSVNRRDSQLHARRLASALLDNSPPPQETLTLISQPEIQQEEI---EELVVEESGEVSSHKGIDVLEA---SKLRGSKARHWFSKQLMLPEWMIDVPSRLS--------HDWYVLPRPAGKRCLVVSSNGTTVSRLRNGSILHHFPSSLPNGA-RIKDIAGPAHMYCILDCIFHEPDQTYYVIDMICWKGYSLYDCSSEFRFFWVNSKLTE-----------------TGACDTPSFYHKYRFSLVPVYHCDQMGLQAAYEGNSPFSKDGLLFYNKHAHYHTGITPLALVWKDMNCSQYFL 296
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_006848377.2 (snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525466.1 snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525467.1 snurportin-1 isoform X1 [Amborella trichopoda] >XP_020525468.1 snurportin-1 isoform X1 [Amborella trichopoda]) HSP 1 Score: 204.9 bits (520), Expect = 5.900e-49 Identity = 118/314 (37.58%), Postives = 172/314 (54.78%), Query Frame = 0 Query: 33 SAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQ-FYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK---GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343 S ++ RR L+RQ RR+ + R L S +D P ET S+ + EE + ++E G S + D A ++RG +A+ +++ Q +PEWM+D+P L+ W+V+PRP GKRCL+V+S G TV+RL NG +LH FPS+LPNG+ R K GP + +LDCI+ E +TY+V+D++CW+ LYDC+ EFRFF + SK E Y +P + CD GL+ AY +PF +DGLLF++K ++ G +PL L+WKDM CS+YFL Sbjct: 15 SDQQKRRELALRRQSVNRRDSQLHARRLASALLDNSPPPQETLTLISQPEIQQEEI---EELVVEESGEVSSHKGIDVLEA---SKLRGSKARHWFSKQLMLPEWMIDVPSRLS--------HDWYVLPRPAGKRCLVVSSNGTTVSRLRNGSILHHFPSSLPNGA-RIKDIAGPAHMYCILDCIFHEPDQTYYVIDMICWKGYSLYDCSSEFRFFWVNSKLTE-----------------TGACDTPSFYHKYRFSLVPVYHCDQMGLQAAYEGNSPFSKDGLLFYNKHAHYHTGITPLALVWKDMNCSQYFL 296
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_008616454.1 (hypothetical protein SDRG_12171 [Saprolegnia diclina VS20] >EQC30111.1 hypothetical protein SDRG_12171 [Saprolegnia diclina VS20]) HSP 1 Score: 203.8 bits (517), Expect = 1.300e-48 Identity = 114/306 (37.25%), Postives = 166/306 (54.25%), Query Frame = 0 Query: 35 REHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRY 341 +E RR + RQR ARR+LT ++R + ++ GA+ LE+ G M ++ A+ + ++ RV+G+++ Y++Q PEWMVDIP LNG G GW V+PRP+GKRCL++A+ G T+ R +G VL +FPSALP+GS + K D + +LDCI+++ T+++LD++CW+ LYDCT EFRF+ L+ K E S + +P+PYF+C GL AY F +DGLLF+ K +G SPLVLLWKD S Y Sbjct: 19 QERRRQDAIARQRQARRDLTMHVREMAIPSV-----GAD-----------LEDITAGLDMDIEVSSAKSRKKTRED-------RVKGRRS-IYSNQLMHPEWMVDIPNALNG-THAGNGEGWLVLPRPDGKRCLVIAANGTTIARTHSGSVLKKFPSALPSGSRKTKYGADQYCVLDCIFNDVDGTFYILDVMCWKGYLLYDCTAEFRFYWLQDKLSETSAVS------------------ISSANPFAFQPIPYFDCTPEGLSTAYHGAFSFSKDGLLFYCKAGVYTLGLSPLVLLWKDATTSPY 281
BLAST of NO02G02560 vs. NCBI_GenBank
Match: OQR81202.1 (snurportin-like protein [Achlya hypogyna]) HSP 1 Score: 203.4 bits (516), Expect = 1.700e-48 Identity = 130/427 (30.44%), Postives = 195/427 (45.67%), Query Frame = 0 Query: 35 REHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDDVVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKL 462 +E RR + RQR ARR+LT ++RA+ +I+ A+ + + D +E T + E RV+G++ + Y +Q S PEWMVDIP LNG G GW+V+PRP+GKRCL++A+ G T+ R +G VL +FPSALP+GS + D + +LDCI+SE+ T+ +LD++CW+ LYDCT EFRF+ L+ K E + Y +PYF+C G++ AY F +DGLLF+ K +G SPLVLLWKD S Y G+ +TL ++V+G V++ +G G+ F ++CS++R +AD+W+K+ Sbjct: 19 QERRRQDAIARQRQARRDLTMHVRAMAVPSIE-----ADLEDITASMDMDVEVTSTKSRKKTRE------------------DRVKGRR-EIYCNQLSHPEWMVDIPSQLNG-TCIGNGEGWYVLPRPDGKRCLVIAANGSTIARTQSGSVLKKFPSALPSGSRKTSCGTDQYCVLDCIFSESEGTFHILDVMCWKGYLLYDCTAEFRFYWLQDKLSETKAMT------------------VTTANPYAFHAVPYFDCTPEGIQTAYHGAFAFEKDGLLFYCKAGIYALGLSPLVLLWKDPHTSPY---------PSQMTIVLQVDELLQCVTLDGKILATLALDFATLHEIVVGDLLRFSVDSMSWSTTSEG--------------------------DVVVDAQGVHFQKRCSAQRGIADSWTKI 367
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_021302556.1 (snurportin-1 [Sorghum bicolor] >KXG21235.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor] >KXG21236.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor] >KXG21237.1 hypothetical protein SORBI_3009G033900 [Sorghum bicolor]) HSP 1 Score: 203.0 bits (515), Expect = 2.200e-48 Identity = 98/226 (43.36%), Postives = 134/226 (59.29%), Query Frame = 0 Query: 119 VRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR-AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343 +RG A +++A Q +PEWMVD P HLST+ W V RP GKRCL+V+S G+T++R+ NG +LHRFPSALPNGS R GP +++LDCI+ E TY+++D++CWR LYDCT EFRFF + SK E Y LP +EC GL+ AY P+V+DGLLF++K ++ + G +PL L+WKD CS+Y + Sbjct: 92 LRGADARRWFARQIMLPEWMVDAP----PHLSTD----WHVFARPSGKRCLVVSSNGMTISRVRNGSILHRFPSALPNGSKRDISGPASSYSILDCIFHEPDETYYIIDMICWRGYSLYDCTAEFRFFWVNSKIAETSAGDPPSTYHR-----------------YRFSALPVYECTLEGLQAAYSGSMPYVKDGLLFYNKHAHYQAGITPLALVWKDETCSQYVI 292
BLAST of NO02G02560 vs. NCBI_GenBank
Match: OQR94383.1 (snurportin [Thraustotheca clavata]) HSP 1 Score: 202.2 bits (513), Expect = 3.800e-48 Identity = 111/321 (34.58%), Postives = 168/321 (52.34%), Query Frame = 0 Query: 20 RIPPKQKAASAYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQAQFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRY 341 R+ ++ + ++E RR + RQR AR +LT +RA+ +I+ + LE+ G M ++ G++ + ++ RV+ +++ Y +Q PEWMVDIP LNG + G GWFV+PRP+GKRCL++AS G T+ R ++G +L +F S LPNGS + ++ + +LDCI++E ++VLD++CW+ LYDCT EFRF+ L+ K E Y P+PY++C GL+ AY F +DGLLF+ K +G SPLVLLWKD S Y Sbjct: 543 RVKGWKRLGRSVDESQERRRQDAISRQRQARLDLTMQVRAMALPSIESD----------------LEDITAGIEMEIEVSGSKSRKKTRED-------RVKARRS-IYCNQLMHPEWMVDIPNQLNG-TAIGNGEGWFVLPRPDGKRCLVIASSGTTIARTLSGSILKKFSSKLPNGSRKTSSSQESYCVLDCIFNENDEKFYVLDVMCWKGYLLYDCTAEFRFYWLQDKLSETAA------------------GEVAPGNPYPFTPVPYYDCTPQGLQTAYHGIYYFAKDGLLFYCKAGLYNLGLSPLVLLWKDATTSPY 820
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_010677883.1 (PREDICTED: snurportin-1 [Beta vulgaris subsp. vulgaris] >KMT11193.1 hypothetical protein BVRB_5g110300 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 201.8 bits (512), Expect = 5.000e-48 Identity = 118/316 (37.34%), Postives = 169/316 (53.48%), Query Frame = 0 Query: 30 AYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALEETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPRAK--GPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343 A S ++ RR L RQ+ R + R L S + +P T S D +LE D P ++G + + K R+RG+++ +++A Q +PEWM+DIP HL +++ WFV+ RP GKRC +V+ G TV+RL NG VLH FPSALPNG+ + G +++LDCI+ E +TY+V+D++CWR LYDC EFRFF L SK E Y P+P + CD +GL AY P+V+DGLLF++KQ+ + G +PL L+WKD KCS+Y + Sbjct: 13 AAISDQQKRREVSLLRQQQNRLDAQSQARRLASTLLSFHQP---TPTSSSSYDASLE--FDIEPEYEEDG-----AEVDNIKDVRQASRLRGQESRRWFARQLMLPEWMIDIP-----HLLSQD---WFVLARPAGKRCFVVSINGTTVSRLRNGSVLHHFPSALPNGARTRENSGSSQSYSILDCIFHEMDQTYYVIDMVCWRGYSLYDCNAEFRFFWLNSKLSES-----------------GACEPPSHYHKYQFSPVPVYNCDQSGLLSAYTGQVPYVKDGLLFYNKQANYQAGNTPLTLVWKDDKCSQYVI 293
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_009406330.1 (PREDICTED: snurportin-1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 201.4 bits (511), Expect = 6.500e-48 Identity = 147/459 (32.03%), Postives = 205/459 (44.66%), Query Frame = 0 Query: 16 PQMRRIPPKQKAASAYTSAREHRRAAVLQRQRAARRELTYNLRALISNAIDKEEPGAETGEDDSRQDQALE-ETCDGAPMAMDEGGAQGSTQYFDEKGAHPNKRVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR--AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFLREXXXXXXXXXXXXXXXXXXXXVQKAKGEDGEKSGYVLSTLDD--VVLGRTTLEEVNAWGLGQVQDGRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGLQFDRKCSSKRAVADAWSKLLFHARAK 469 PQ R P K+ S ++ RR L RQ R + R L S+ + + + + D A+E E A E S + ++RG++A +++A Q +PEWM+DIP HL + W+V RP G RC +V+S G T++RL NG VLH FPS+LPNGS GP + +LDCI+ E ++TY+V+D++CWR LYDCT EFRFF L SK E Y +P ++CD GL AY P+V+DGLLF++K ++ + G +PL L+WKD CS YFL V +DG L+T DD VVLG + + GL RAG + GLQF K + RA AD++SK+ F A+ Sbjct: 3 PQDGRRPIKRST----VSDQQRRRELALVRQAQQRSDSQNRARRLASSVL-----ALHSSPEPALPDDAIEPEQAPEVDWAQTEADLTESEALVRDLNVAQASKLRGREARRWFAHQLMLPEWMIDIP----PHLDRD----WYVFARPAGNRCFVVSSNGTTISRLRNGSVLHHFPSSLPNGSRTRDMSGPASSYCILDCIFHEPNQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAES-----------------GACNPPSTYHRYTFSVVPIYDCDQAGLHAAYSSVVPYVKDGLLFYNKHAHYQTGNTPLALVWKDNYCSEYFL---------DTDSKGLVPTQQQVVLEIQDDGR-----LTTSDDPPVVLGCVEADFIQKSGL------RAG--------NLLRFAIRDESVSLVDGKLEIGGLQFVSKANRARAFADSYSKVFFQYAAR 399
BLAST of NO02G02560 vs. NCBI_GenBank
Match: XP_004967897.1 (snurportin-1 [Setaria italica] >XP_012701729.1 snurportin-1 [Setaria italica] >KQL03981.1 hypothetical protein SETIT_001629mg [Setaria italica]) HSP 1 Score: 201.1 bits (510), Expect = 8.500e-48 Identity = 95/227 (41.85%), Postives = 136/227 (59.91%), Query Frame = 0 Query: 118 RVRGKQA-QFYASQFSIPEWMVDIPRDLNGHLSTEEGGGWFVMPRPEGKRCLMVASGGITVTRLMNGEVLHRFPSALPNGSPR-AKGPKDGWTLLDCIYSEASRTYFVLDLLCWRKMELYDCTCEFRFFILRSKFEEELGRSXXXXXXXXXXXXXXXXXXXXXXGGYLLEPLPYFECDSNGLRRAYGDYAPFVRDGLLFWSKQSYVEIGPSPLVLLWKDMKCSRYFL 343 ++RG +A +++A Q +PEWMVD P HL+++ W V RP GKRCL+V+S G+T++R NG +LHRFPSALPNGS R GP +++LDCI+ E +TY+++D++CWR LYDCT EFRFF + SK E Y +P +EC GL+ AY P+V+DGLLF++K ++ + G +PL L+WKD CS+Y + Sbjct: 85 KLRGSEARRWFARQIMLPEWMVDAP----PHLASD----WHVFARPSGKRCLVVSSNGMTISRARNGSILHRFPSALPNGSKRDISGPASSYSILDCIFHEPDQTYYIIDMICWRGYSLYDCTAEFRFFWVNSKLTETSAGDPPSTYHR-----------------YRFSAVPIYECTLEGLQAAYSGSTPYVKDGLLFYNKHAHYQAGITPLTLVWKDETCSQYVI 286 The following BLAST results are available for this feature:
BLAST of NO02G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02560 ID=NO02G02560|Name=NO02G02560|organism=Nannochloropsis oceanica|type=gene|length=1524bpback to top protein sequence of NO02G02560.1 >NO02G02560.1-protein ID=NO02G02560.1-protein|Name=NO02G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bpback to top Synonyms
Publications
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