NO02G01750, NO02G01750 (gene) Nannochloropsis oceanica

Overview
NameNO02G01750
Unique NameNO02G01750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5280
Alignment locationchr2:511429..516708 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:511429..516708 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0022857transmembrane transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR006726PHBA_efflux_AaeB/fusaric-R
Homology
BLAST of NO02G01750 vs. NCBI_GenBank
Match: EWM30522.1 (hypothetical protein Naga_100013g27 [Nannochloropsis gaditana])

HSP 1 Score: 868.6 bits (2243), Expect = 2.100e-248
Identity = 534/1004 (53.19%), Postives = 626/1004 (62.35%), Query Frame = 0
Query:    1 MADGEDDDAAINLCRTTPLFPSSCVKANVSFAPPQPPQQP-SDNPTPTARDANSGNE----NRD---DIEAGNGTSHRRPSLPPLNLGTTSSSATSYFKHSPKARSISN--------YLNREATILRSSVKQVLRWRKRFSGPSDVKPGVRAFHNKLLNASRPALACFLATGISMVYPWSNNVTWFSITLSISGVGRNLGHTVEGIRQQWLGTIVAIPLCFFLKLFAFSKLFTAIMVLLVSVLVAGTSTLSEAAKKLCLIFITWDVLVPLVAPSVTIENLMKDLLKAVLGANIVCFFVMLCPVPHLAVLLCRWRLEELQEVLGRFLEDAADSFCLQDDSGLHDLEDVIDEAAALVRDARALLPDVSFELALLGCGCARARGRRVYEMVVQYLGVLEGQLENCRGMAVALSDMFPNATHSEFVRAMRPPLLALVLESKIVLEGTCHHVCAGLHGWAP----W-------GQWRCRRRKHQIRRR-SDNCMMMRDEDGRERRPSLDGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYSXXXXXXXXXSVDGEDYDETGPIXXXXXXXXXXXXXXXGLSKLGDT-DGLEGYCEREEYGDDDEGYGVPAELFLPPKVALARVLHELLKTRMRVVYGVELKAKAQTDPQMMSAYGTICPSSSSLLTHRRKS-RSLSIDSFALTSPTSIVFERSTSAAAAAERFQKESARVGYMNLLPRNAFVLDLKLFIEAFDVHKALCGSHSTALLQPAQSPSTLSSHAAAGATAETIKTGATTTIATARSRHCPSCASLPERLYHGIYRGPGRGLKSWRQPLKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSSGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKDGLATFRVGMELG 975
            M D E++DA  N  +     PS  ++     AP  P   P   +      D   G++    NR+   + +    T+ +RP L PLN  +TS S  +Y + SP + S+          YL R AT LRS+VK   RWRKR  GP DV+P VRAF+ KLLNASRPALACFLATG+SMVYPWS+ VTWFSITLSISGVGRNLGHT+ GIRQQW+G  VA+PLCF LK   FSK+ TAI + LVSV V G+  L+EAAK++ LIFITW VLV LV P  T+E+L+ DL+KAVLGANI C  VML P P LAV LCRWRLEELQEVLGRFLEDA DS+CLQDDSGLHDLE VIDEA +L+   RALLPDV FELALL CGC R+  RR Y+ VV+YLG+LE QLENCRGMAVALSDM+PNATHSEFVRAMRP LL +V ESK VLEGTC+H+ A L  W      W       G WR  + +  + R  +         DG+ +  S+   D                                                      + +      +GPI                LS+   +   ++  CE       D    VP ELF PPK ALARVLH LLKTRMRVVYGVELK  A  D         I P        R+   R LSID  A+ SP S+V ERS +AA AA  FQK+S R GYMNLLPRNAFVLDLK+F+ AF+ H+ LC     A                       ++  AT+T    +   C    S+    Y  I RGPG G  +WRQPLKV LAILL+SIVVL DDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAP+ NK  IV +LT WVF+CAF+RGS TYGE A SA LTAPI+V+GPV+GSSGAVVRISQVILGTVIYV VDNLIFPTRAK+LLR++LC +V+KL  LC+DGLA F+  + LG
Sbjct:    1 MTDEEENDAVSN-DKPRNSLPSDSIRV----APDVPGVSPLKHSHQSLLHDTGIGDQWVEYNRNLGSNCDFRTSTTSKRPFLEPLNDISTSPSRHTYGEASPSSASVRTPRKDNMGIYLTRVATGLRSTVKHAFRWRKRPPGPRDVRPSVRAFYYKLLNASRPALACFLATGVSMVYPWSHKVTWFSITLSISGVGRNLGHTLAGIRQQWMGITVAVPLCFLLKFLEFSKVLTAIAIFLVSVAVCGSDMLNEAAKQVSLIFITWVVLVALVTPDTTMEDLLLDLIKAVLGANIFCTVVMLFPSPRLAVRLCRWRLEELQEVLGRFLEDAVDSYCLQDDSGLHDLEAVIDEAVSLIETIRALLPDVDFELALLSCGCQRSASRRTYDHVVEYLGILEDQLENCRGMAVALSDMYPNATHSEFVRAMRPGLLDVVTESKKVLEGTCYHLSAALQYWIQQKWWWRLCYRGRGPWRPPKTQSFVGRECATRSAQSSRGDGKHKHVSIHMEDAGKPQHGGLFSRRPNSSLYSEGGD--------------------HEQARAPNCAAEENTTMSLSGPISEQEREH---------LSRAPPSFYDIDPQCE-------DVEDCVPGELFSPPKAALARVLHALLKTRMRVVYGVELKGTAPDD--------RIEPVHELPSKMRQDDLRVLSIDRLAMRSPRSVVLERSRTAAVAAASFQKDSERRGYMNLLPRNAFVLDLKMFVAAFERHRILCNVSMVA-----------------------VEPSATST--REQKTCCSLATSVFVNAYRNICRGPGEGWDAWRQPLKVALAILLASIVVLADDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPVVNKVAIVFILTAWVFVCAFSRGSRTYGEAATSAGLTAPIIVIGPVVGSSGAVVRISQVILGTVIYVGVDNLIFPTRAKILLRSQLCESVEKLGNLCRDGLAIFQTEIALG 930          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: EWM22996.1 (p-hydroxybenzoic acid efflux pump subunit aaeb, partial [Nannochloropsis gaditana])

HSP 1 Score: 164.9 bits (416), Expect = 1.500e-36
Identity = 92/177 (51.98%), Postives = 123/177 (69.49%), Query Frame = 0
Query:  786 RGLKSWRQPLKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSSGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKD 963
            R L+  RQPLKV LA +L ++ +L+     G +T W  I V Q++SSHP S+FK+G  R+QGTVLG + G+ V  W    +   +VL LT WVF CAFNR SP YGEVA+ AA+TAPI+++GP++G +GA++RI Q ILG+ IYV VDN+ +P RAKL LR EL T+    LGL +D
Sbjct:  102 RALEMARQPLKVALAYVLVTLTMLI---LTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTS----LGLFRD 271          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: EWM22994.1 (hypothetical protein Naga_100761g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 114.4 bits (285), Expect = 2.300e-21
Identity = 116/418 (27.75%), Postives = 187/418 (44.74%), Query Frame = 0
Query:   22 SSCVKANVSFAPPQPPQQPSDNPTPTARDANSGNENRDDIEAGNGTSHRRPSLPPLNLGTTSSSATSYFKHSPKARSISNYLNREATILRSSVKQVLRWRKRFSGPSD-VKPGVRAFHNKLLNASRPALACFLATGISMVY-PWSNNVTWFSITLSISGVGRNLGHTVEGIRQQWLGTIVAIPLCFFLKLFAFSKLFTAIMVLLVSVLVAGTSTLSEAAKKLCLIFITWDVLVPLVAPSVTIENLMKDLLKAVLGANIVCFFVMLCPV--PHLAVLLCRWRLEELQEVLGRFLEDAADSFCLQDDSGLHDLEDVIDEAAALVRDARALLPDVSFELALLGCGCARARGRRVYEMVVQYLGVLEGQLENCRGMAVALSDMFPNATHSEFVRAMRPPLLALVLESKIVLEGTCHHVCAGL 436
            SS   A +S   P P       PT    D +     ++     +   HRRP      +G   SS +      P    +S +  R A   R +   V    K   GPS  +   +  FH KL    R ALA  LAT  S  +  W++ +TWFS+TL +SG   +LG T+      W G  V +PL + ++    S   T   +      +     +S+  K++  IF+T  V+  ++ P++   ++++D+   +L AN      +L P   P LA+L  R +L  ++  LG  L    ++F L ++     LE ++ E +A V D +  +P V +E  LL    +      +   +  +L  +E QLE  RGM ++L  M  NATH EF++ ++ PL  +V  S  V +    H+ A L
Sbjct:  122 SSQSPARISIHVP-PTSTGGKLPTSVNNDRSHVESTQEGSPCRHDAGHRRP------VGKRRSSRSK----RPAWHPLSFFQRRSAR--RRATAPV----KAAQGPSPLLGAALMHFHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVS------MPGQLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAEL 516          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: OAE19487.1 (hypothetical protein AXG93_1040s1510 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 71.2 bits (173), Expect = 2.200e-8
Identity = 55/180 (30.56%), Postives = 96/180 (53.33%), Query Frame = 0
Query:  795 LKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLV-LTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSSG------AVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKDGLATF 968
            LK+ LA+ ++++  ++ +K       W  +TV   + +H   +F+    R+QGTV+G++    +     IH+    VLV L  WV + ++ R S  +G   V A LTA IV    ++GS+G      AV RI++  +G +  + V++L+FP RA +L R EL +++  L    K  +A +
Sbjct:  558 LKISLAMAIAALAGILYNKKF---AFWAVVTVGFIIQNHQGGSFRMANLRLQGTVIGSIYAYLMV--IVIHDHPDFVLVALIPWVVVLSYLRFSKLFGAAGVIAGLTAAIV----MLGSNGAPIQELAVTRITENFIGVLALIFVESLVFPDRAAILCRKELVSSLVDLRDCVKAVVAAY 728          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: OAE23258.1 (hypothetical protein AXG93_620s1250 [Marchantia polymorpha subsp. ruderalis] >PTQ48363.1 hypothetical protein MARPO_0005s0035 [Marchantia polymorpha])

HSP 1 Score: 71.2 bits (173), Expect = 2.200e-8
Identity = 53/167 (31.74%), Postives = 92/167 (55.09%), Query Frame = 0
Query:  796 KVGLAILLSSIV---VLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIG---SSGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKL 957
            KV + ++L+++     L +D H      W PITV+  + +    AF+  + R+QGT +G++ G  V +    H K ++ L+L  WV    + R S T+G   + +ALTA I++VG   G    + A+ RI+   +G   +V V+ L+ P RA +L+R EL  ++++L
Sbjct:  550 KVSMIMMLATVFGVHALPNDIH----ACWAPITVSFIIGNLQGGAFRLASLRIQGTAVGSIFGYLVVSELYNH-KYILPLILAGWVSFSDYIRYSKTHGYSGLVSALTAAILMVGDFDGQDIKAFAMDRIAMTFIGVACFVLVETLLLPERAVVLVREELLQSLKRL 711          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: PTQ37727.1 (hypothetical protein MARPO_0055s0015 [Marchantia polymorpha])

HSP 1 Score: 71.2 bits (173), Expect = 2.200e-8
Identity = 55/180 (30.56%), Postives = 96/180 (53.33%), Query Frame = 0
Query:  795 LKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLV-LTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSSG------AVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKDGLATF 968
            LK+ LA+ ++++  ++ +K       W  +TV   + +H   +F+    R+QGTV+G++    +     IH+    VLV L  WV + ++ R S  +G   V A LTA IV    ++GS+G      AV RI++  +G +  + V++L+FP RA +L R EL +++  L    K  +A +
Sbjct:  562 LKISLAMAIAALAGILYNKKF---AFWAVVTVGFIIQNHQGGSFRMANLRLQGTVIGSIYAYLMV--IVIHDHPDFVLVALIPWVVVLSYLRFSKLFGAAGVIAGLTAAIV----MLGSNGAPIQELAVTRITENFIGVLALIFVESLVFPDRAAILCRKELVSSLVDLRDCVKAVVAAY 732          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: GAQ91269.1 (hypothetical protein KFL_007550015 [Klebsormidium nitens])

HSP 1 Score: 69.7 bits (169), Expect = 6.500e-8
Identity = 53/188 (28.19%), Postives = 95/188 (50.53%), Query Frame = 0
Query:  774 ERLYHGIYRGPGR---GLKSWRQPLKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSSG----AVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQ 955
            +R + G++   GR     +  +   KV  A+ +  ++ ++  ++ G    W  +T+A  +  +  ++F++   R+QGTV GA+ G  V      H  A+  L L  WV +  F R S  YG   V A  TA I+++G    +      A+ RI++  +G V ++ V+  ++P RA LL+R  L +A+Q
Sbjct:  488 KRRFDGVFEFAGRFKPDARKLKAGSKVACAVGVGGLLGIIAGRNYG---YWAVVTIAFIIGGYQGTSFRAAWLRLQGTVAGAIYGYLVILVVHGHPVAVGAL-LVPWVALVTFIRYSKAYGYSGVVAGFTAAIIMLGYKSSNQNVQDYALGRITETCIGIVTFIVVETCVWPNRAALLVREALISALQ 671          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: OAE24457.1 (hypothetical protein AXG93_1615s1100 [Marchantia polymorpha subsp. ruderalis] >PTQ40618.1 hypothetical protein MARPO_0039s0105 [Marchantia polymorpha])

HSP 1 Score: 69.3 bits (168), Expect = 8.500e-8
Identity = 56/198 (28.28%), Postives = 101/198 (51.01%), Query Frame = 0
Query:  767 PSCASLPERLYHGIYRGPGRGLKSWRQPLKVGLAILLSSI---VVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGS--SGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGL 960
            PS  S      H I    G      R+  K+ L++++++    +++  + H    + W  +TV   + ++   +++  + R+QGTVLGA+ G      +  H+ A + L L  WV + +F R S  YG   + +A TA ++++G         A+ RI++  +G + +V V+ ++FP RA LL+R EL   V  L+GL
Sbjct:  535 PSAVSRFFSKAHEILHKCGASRAQARRSFKIALSMVMAATFGNLIVSQEAH----SFWATVTVGFIIGNYQGGSWRISSLRLQGTVLGAIYGYLALRVSKNHSWANL-LALIPWVVLSSFVRYSTAYGYSGLVSAFTAAVLILGGFENDIRKYAMDRITETFVGVLSFVFVETVVFPERAVLLVRKEL---VSSLIGL 724          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: PTQ27816.1 (hypothetical protein MARPO_0183s0021 [Marchantia polymorpha])

HSP 1 Score: 69.3 bits (168), Expect = 8.500e-8
Identity = 59/198 (29.80%), Postives = 97/198 (48.99%), Query Frame = 0
Query:  789 KSWRQPLKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVG--PVIGSSGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKDGLATFRVGMELGREASFLSGSH 985
            K  +  LK+ +A++L+++   +D K    Q +W   TV   +  H   AF+    R QGT +GA+ G      +      +I++V+TLW       + S  +G     A  TA  +++G  P    + AV +I+Q  +G + YV V+ L+FP RA+ L++TEL   + +L    +D +A   V M  G  A  L   H
Sbjct:  531 KQMKGALKISIALMLATVFGALDLKGDSHQ-VWAATTVCYIIGYHQGGAFRIALQRFQGTTIGAIFGYLAIRGSGSQG-FVIMIVITLWTVCTNIVKHSKMHGYSGGCAGSTAVGMMLGDPPEDIQTYAVQKITQTFIGVLSYVLVELLVFPDRARNLVKTELVHNIVRL----RDAVAEV-VDMYTGARAGCLECRH 721          
BLAST of NO02G01750 vs. NCBI_GenBank
Match: OAE27406.1 (hypothetical protein AXG93_2015s1350 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 68.6 bits (166), Expect = 1.500e-7
Identity = 55/178 (30.90%), Postives = 88/178 (49.44%), Query Frame = 0
Query:  793 QPLKVGLAILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALTAPIVVVGPVIGSS---GAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELCTAVQKLLGLCKDGLATF 968
            Q L+     L  S+  L    +      W  ++VA  M +    +F+    R+QGTVLG++    +      H + L++L L  WV + ++ R S  +G   V A LTA IV++G   G S    AVVRI+Q  +G +  + V+ +I+P RA +L R EL  ++  L    K  +A +
Sbjct:  705 QALRAFKVSLAMSLAALAGCMYNEAYAFWAMVSVAFIMQNQQGGSFRMANLRLQGTVLGSIYAYLMLNLMSKHPQ-LLLLALVPWVVLLSYLRFSKLFGASGVIAGLTAAIVMLGAEGGMSIQQLAVVRITQNFIGVLALILVETIIWPERAVILSRRELVLSLIDLRDCVKAVVAVY 881          
The following BLAST results are available for this feature:
BLAST of NO02G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 12
Match NameE-valueIdentityDescription
EWM30522.12.100e-24853.19hypothetical protein Naga_100013g27 [Nannochlorops... [more]
EWM22996.11.500e-3651.98p-hydroxybenzoic acid efflux pump subunit aaeb, pa... [more]
EWM22994.12.300e-2127.75hypothetical protein Naga_100761g1, partial [Nanno... [more]
OAE19487.12.200e-830.56hypothetical protein AXG93_1040s1510 [Marchantia p... [more]
OAE23258.12.200e-831.74hypothetical protein AXG93_620s1250 [Marchantia po... [more]
PTQ37727.12.200e-830.56hypothetical protein MARPO_0055s0015 [Marchantia p... [more]
GAQ91269.16.500e-828.19hypothetical protein KFL_007550015 [Klebsormidium ... [more]
OAE24457.18.500e-828.28hypothetical protein AXG93_1615s1100 [Marchantia p... [more]
PTQ27816.18.500e-829.80hypothetical protein MARPO_0183s0021 [Marchantia p... [more]
OAE27406.11.500e-730.90hypothetical protein AXG93_2015s1350 [Marchantia p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006799NSK006799Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01750.1NO02G01750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627190gene_759Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g27gene181Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01750.1NO02G01750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01750 ID=NO02G01750|Name=NO02G01750|organism=Nannochloropsis oceanica|type=gene|length=5280bp
ATGGCGGACGGAGAGGACGATGACGCCGCCATCAATTTGTGCAGAACGAC
ACCACTCTTTCCATCATCTTGCGTCAAAGCCAACGTCTCCTTTGCGCCTC
CCCAGCCTCCCCAACAGCCTTCCGATAATCCCACCCCTACTGCCCGTGAC
GCTAATTCCGGAAACGAGAATCGTGACGACATCGAGGCAGGCAATGGTAC
CAGTCACAGGCGACCCTCTTTGCCTCCCTTGAACTTAGGCACCACCTCGT
CCTCCGCCACGTCATACTTCAAGCACTCCCCAAAGGCCCGGAGCATCAGC
AACTATTTGAACCGTGAGGCAACAATTCTCCGGAGCTCGGTCAAGCAAGT
CTTGCGCTGGCGGAAAAGATTTTCAGGCCCTAGTGACGTCAAGCCGGGTG
TGCGGGCGTTCCACAACAAATTGCTCAATGCCTCCCGGCCGGCCTTGGCG
TGCTTTCTGGCCACAGGTATTTCCATGGTCTACCCATGGTCGAATAACGT
CACGTGGTTCTCCATCACATTGAGCATATCAGgtacattcgacttaattt
tatcatgggtaaaatagtgagagtgttaacaagctgtgacttttgttcgg
ctcgaatttcctcctttctcgtttgtccgaggatcttgtaaactgaagtg
tcagcgagcttacttttctttagtcgtcctcatcattcccggtcacttac
accacgatcatttatgtatctggctcgttaatcaagttttaaactaaaat
atcatgtcgctcttccctatccctcccttctccatctctctgatagGCGT
CGGCCGCAACCTGGGCCACACTGTCGAAGGTATCCGGCAGCAATGGCTTG
GTACAATCGTCGCCATTCCCCTGTGCTTTTTCCTCAAGCTTTTTGCCTTT
TCCAAGCTTTTTACAGCTATAATGGTTCTTCTGGTTAGTGTGCTGGTGGC
AGGCACGAGCACTCTGTCGGAAGCAGCCAAAAAGTTGTGTCTTATTTTCA
TAACTTGGGACGTGCTAGTTCCCCTCGTTGCACCAAGTGTAACCATCGAG
AACCTCATGAAGGATCTTCTCAAGGCTGTTTTAGGCGCAAATATTGTTTG
CTTCTTCGTCATGTTGTGCCCTGTCCCTCATCTTGCCGTCTTGTTATGTC
GCTGGCGTTTGGAGGAGCTACAGGAGGTCCTCGGTCGGTTTCTCGAGGAT
GCAGCTGACTCCTTCTGCTTACAAGATGACTCAGGCTTGCATGACTTGGA
GGATGTTATTGACGAAGCTGCTGCCTTAGTAAGGGATGCGCGTGCCTTGC
TCCCTGACGTGAGTTTTGAGTTGGCACTGTTGGGGTGTGGATGTGCGAGG
GCAAGGGGAAGAAGGGTGTATGAGATGGTGGTGCAGTACTTAGGAGTGCT
TGAAGGTCAGCTGGAGAATTGCAGGGGGATGGCGGTCGCCTTGTCGGACA
TGTTTCCAAACGCGACGCATTCTGAATTCGTAAGGGCGATGCGCCCGCCT
TTATTGGCTTTGGTGCTGGAGAGTAAGATTGTGTTGGAGGGGACTTGTCA
TCATGTATGTGCGGGGTTGCACGGGTGGGCCCCTTGGGGACAGTGGCGAT
GCCGAAGGAGGAAGCATCAGATAAGAAGGCGTTCGGACAATTGTATGATG
ATGAGAGATGAAGATGGGAGGGAAAGAAGACCGAGTCTCGATGGGAGTGA
TGATGATGAGAATGGGCTTGGGCTTGGACCACGAAAGCACCAGCACCAGC
ACCAGCACCAGCAGGATCAGCAGTCTCAGCGGCACCAGCAGCACCAGCAG
CACCAGCAGCAGCTGTATCAGCAAGAGACCTATAGCGGGGGTGAGAGAAG
ACGTCGTCGCCCAAGCGTTGACGGTGAGGATTACGATGAAACGGGGCCGA
TAAGACAACAGCAGCAACACCACCACCACCACCAGCAACGCCGTCGTGGT
CTGTCGAAGCTTGGCGATACTGATGGTTTGGAGGGGTATTGCGAGAGGGA
GGAATATGGTGACGATGACGAGGGTTATGGTGTGCCTGCTGAGTTGTTTT
TGCCGCCCAAGGTGGCCTTGGCCCGGGTCCTCCATGAGCTTCTTAAGACA
CGCATGCGAGTAGTTTATGGTGTGGAGCTGAAGGCCAAGGCACAAACAGA
CCCACAAATGATGAGCGCGTACGGCACCATTTGTCCCTCTTCCTCTTCTT
TATTGACCCATCGTCGCAAGAGCCGAAGTCTCAGCATAGATAGCTTCGCC
TTGACTTCTCCTACTTCTATAGTTTTTGAGCGCTCCACCTCCGCAGCCGC
AGCAGCCGAGCGTTTCCAAAAGGAATCCGCGCGGGTGGGGTATATGAATT
TGTTGCCCCGCAACGCATTTGTTTTAGACCTAAAGCTCTTCATCGAGGCC
TTCGACGTGCACAAGGCCCTCTGTGGATCTCATTCCACGGCCCTTCTCCA
ACCAGCGCAATCACCATCAACATTATCCTCGCACGCAGCAGCAGGAGCAA
CAGCAGAAACAATAAAAACAGGGGCAACAACAACCATAGCTACAGCCCGC
TCGCGACATTGTCCATCGTGCGCCTCCCTCCCTGAGCGGCTGTATCATGG
CATTTACCGAGGCCCCGGTCGTGGGTTAAAATCCTGGCGACAGCCTCTCA
AGGTAGGATTGGCAATTCTCCTTTCAAGCATTGTTGTACTGGTAGATGAT
AAGCACCTTGGCCTACAAACTATTTGGTGTCCCATAACCGTTGCCCAAAC
AATGAGCAGCCACCCTTCCTCCGCGTTCAAAAGCGGGGCCAATCGTGTAC
AAGGCACCGTGCTCGGCGCCGTCATGGGCATGGCAGTCACTACCTGGGCT
CCTATCCACAACAAGGCCTTAATCGTACTCGTTCTCACCTTGTGGGTGTT
CATCTGTGCTTTCAACCGCGGCTCGCCTACCTATGGTGAAGTTGCTGTCT
CCGCCGCCTTGACGGCTCCTATAGTGGTGGTTGGTCCTGTGATAGGGTCA
TCGGGTGCAGTCGTCCGTATCTCGCAGGTCATTCTGGGAACAGTTATATA
TGTTGCCGTTGATAACTTGATTTTTCCTACCAGGGCGAAACTGCTTCTGC
GCACTGAGTTGTGTACTGCCGTGCAGAAATTGTTGGGTCTGTGTAAGGAT
GGTTTGGCAACGTTTCGGGTGGGGATGGAATTGGGGCGTGAAGCCAGTTT
TCTGAGTGGTTCTCATGATGGGATAAGTAGTGGTGGTGGCAGTGGTGGCA
CTGCCGGCAGTGATCGGGGTGGTGGCAATGGTTTTGCTGGGAGTGGGTTG
GGAATGAATGGAACCAGCAGGAGCACGAGCACCTGTACCACCAGCAGTAA
AGTAGCGGTCAAGACAGCAGCAGTGAAGGAAGGTTGGAATGTCCAGAGCG
CGGTTGAAAATGCAACAGCAGCAGCAACAACAACACCAAGGGAGGGCATG
ACAACCGCGACGGCCAAAAAAAAGGGAACGGGCACTGAGGGCCCCGCGGC
ATCAACGGTTGCTCATACTTCAGCTACATCTGCTACCTCTGGAGGTGCGC
CAGGGCTGCCGTCGTTCCACAGTACCAACCCCTCCCCCCTCTCCCCCCTT
CCGCATGCGCGCCCCGCACTCCCATCATTCCTCCCAACCAAGTGAACAAC
ACCTACACCTACCACGCAAGCGCCCGTCTGGCCGCTGCCGTCGGCGCAGC
CAAGAAGCGAGTCCGTCGAGATTCTGTAGCCATCAGCCAGGCTCTGGTGA
AAGAGACATTATACATCTCGCTTGCGTCAGACGAACCGGAGTTGTGGCAT
AAGCCTTTTCAACGTGAAGCGTATTTGAAAGTACATGCAATTCAGTTGAG
AATGCATCGGTACTTATTGATGCTTCATCGTTCGGCAGCTTCTTTCCCCG
AAGAGTTAGCGGAGTGGGATCAGGATATGTTGAGGGCTTACGAGTCGATT
ATTTTAAGGTTACAACGAACGGTGGAAGCAGTTTTTGTAGAGGCCTTGGC
GAGACTACAATTGTTGAGGAGCGCGCAAGGGAGGGTTGGTGGGAGAGGAT
TAAAGGGGAGAATTAGTACGGGGGTCGTGAGAGCGCGGATGGGGTGAATA
TATTTCAGATTCGGGAAGgtgagaagatgggacggggagggaggcggcat
agacgggtagcttttttcggccatttatcaattcttttttgtttaaacgt
gtgcaatatatgttttcattcatcattaaatagcgcaaactagtatgact
gacattttacccttttactcctctccttctccttctctcctccctgccct
tcatctgcgacagAATTCCGCGACATTCAAGATACAATCGATGGCCTCGT
AACCGAGTACTTCTCCCGCGACCCCGTCCTCACAAGTCTCAACTTCATTG
TTCCGTTGAACGGCATGATTTACTCAACTCGTAAAATGTCCACGGAATGC
GTGAAATTCGTGCAGGCCGTGCGAGAGTTAATGCTCCGTGAGGGGAAAAT
TGGGAAAGGAGCAGCGATGGCGGCGGCGGCAGAAGTTCTGGTGCCGGGGG
GGAAGACGTGTCTTGAGAGAGGCGGAAAAGAGGGAGAGATAGGGGTAATG
TGGAGGGGGAAGGACAACAAATGAGTCGATGTGCATAAACATGTTTATGT
TGAGAAATTAGGATCGAAGAGGAAAGTACTTAAACTGCAAATAAAGTATC
AAAGGACAACTGCTTGTAAAAATTTCAAAACATTTTTTGTCCTTTGTGGT
CGCTCGGTTACCTTTACAATTGTTTTACGTACATCTCTGTTAGGGTTAGG
GTTACACACACATACACTGAAGAGAGGAAGGAAAGCATACATGTGAAGAT
CAGAAGAATTCAGTTAAAAGAGGGAACGATAAACGAAGGTTATGCAACCA
AAGTAAAAAATTTAGTCCTGACGGGATTTGATAACGTGTCAAGGTTGCAA
CATCTCCTATGATAGTTGTTGGCCCATTGACGACCCGTAGCCCCCTGCTC
TGCATCGGGATTCGAACTCTCGCTCTAATCCTCTCGGTAGAAGGCAGGTG
CGATATCCTGCGGGTGGAGAGGAGGTGGGGAATGGGCCTGAATTAGTCCT
CCAGTGCCTGTGATCGAAACAGGGCTCGTTTGGCGTACAACGGAGAGGAT
TCGAAACTCACCGCTTTCGCCACAGGACCACATGATTCGGGACGCGCGTG
GAGCGCCGAAGCGACTCGGCTACGTCCCAGAATCAACTCAAATTGGCAAA
GGGTTGCATTTATCAATTACCTAAAGAAGA
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protein sequence of NO02G01750.1

>NO02G01750.1-protein ID=NO02G01750.1-protein|Name=NO02G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1127bp
MADGEDDDAAINLCRTTPLFPSSCVKANVSFAPPQPPQQPSDNPTPTARD
ANSGNENRDDIEAGNGTSHRRPSLPPLNLGTTSSSATSYFKHSPKARSIS
NYLNREATILRSSVKQVLRWRKRFSGPSDVKPGVRAFHNKLLNASRPALA
CFLATGISMVYPWSNNVTWFSITLSISGVGRNLGHTVEGIRQQWLGTIVA
IPLCFFLKLFAFSKLFTAIMVLLVSVLVAGTSTLSEAAKKLCLIFITWDV
LVPLVAPSVTIENLMKDLLKAVLGANIVCFFVMLCPVPHLAVLLCRWRLE
ELQEVLGRFLEDAADSFCLQDDSGLHDLEDVIDEAAALVRDARALLPDVS
FELALLGCGCARARGRRVYEMVVQYLGVLEGQLENCRGMAVALSDMFPNA
THSEFVRAMRPPLLALVLESKIVLEGTCHHVCAGLHGWAPWGQWRCRRRK
HQIRRRSDNCMMMRDEDGRERRPSLDGSDDDENGLGLGPRKHQHQHQHQQ
DQQSQRHQQHQQHQQQLYQQETYSGGERRRRRPSVDGEDYDETGPIRQQQ
QHHHHHQQRRRGLSKLGDTDGLEGYCEREEYGDDDEGYGVPAELFLPPKV
ALARVLHELLKTRMRVVYGVELKAKAQTDPQMMSAYGTICPSSSSLLTHR
RKSRSLSIDSFALTSPTSIVFERSTSAAAAAERFQKESARVGYMNLLPRN
AFVLDLKLFIEAFDVHKALCGSHSTALLQPAQSPSTLSSHAAAGATAETI
KTGATTTIATARSRHCPSCASLPERLYHGIYRGPGRGLKSWRQPLKVGLA
ILLSSIVVLVDDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVL
GAVMGMAVTTWAPIHNKALIVLVLTLWVFICAFNRGSPTYGEVAVSAALT
APIVVVGPVIGSSGAVVRISQVILGTVIYVAVDNLIFPTRAKLLLRTELC
TAVQKLLGLCKDGLATFRVGMELGREASFLSGSHDGISSGGGSGGTAGSD
RGGGNGFAGSGLGMNGTSRSTSTCTTSSKVAVKTAAVKEGWNVQSAVENA
TAAATTTPREGMTTATAKKKGTGTEGPAASTVAHTSATSATSGGAPGLPS
FHSTNPSPLSPLPHARPALPSFLPTK*
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Synonyms
Publications