NO02G01550, NO02G01550 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G01550
Unique Name	NO02G01550
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4473
Alignment location	chr2:457961..462433 +

Link to JBrowse

Properties


Property Name	Value
Description	Multi-sensor hybrid histidine kinase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:457961..462433 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system
GO:0007165	signal transduction
GO:0016310	phosphorylation
GO:0007165	signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0000155	phosphorelay sensor kinase activity
GO:0016772	transferase activity, transferring phosphorus-containing groups
GO:0016740	transferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036097	HisK_dim/P_sf
IPR036890	HATPase_C_sf
IPR011006	CheY-like_superfamily
IPR005467	Sig_transdc_His_kinase_core
IPR001789	Sig_transdc_resp-reg_receiver
IPR003594	HATPase_C
IPR003661	EnvZ-like_dim/P
IPR004358	Sig_transdc_His_kin-like_C

Homology

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: EWM30516.1 (multi-sensor hybrid histidine kinase [Nannochloropsis gaditana])

HSP 1 Score: 1044.6 bits (2700), Expect = 2.400e-301
Identity = 689/1142 (60.33%), Postives = 755/1142 (66.11%), Query Frame = 0

Query:   67 RVRRTIGLCVLCALCMAGSMLLGARVLSLGGTALFWPGPPILAMFLALNPSWMRRWLSMAALLVYLTCILLNSGKLNDSLFLNFVFMIVDATEVFCVTVCLHAVMQVAPPGFVRTGVGINAIMLYPLLLAPLKVGLNTLLIYMTFGPLHLPLFETLVIWLIGDLFTDFFVLYSVLVFRFYWLQYRELVDDWKMTCEREGRKEKEKERMKEESAAGSMGREAAHVGGGLARPARADVGNIEMMVCQKKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKLG------------EAHPLEVWFRSPHIGRDIFVFIFFVAIIILSSFASILNHTTVVRQPLFYLWSRLLFPVIGYVTVRYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSIYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGIDPSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEIRGLWDSGRLRK 1197
            R RRT+  C  CALC+AGS +LG++VLSLGGTALFWPGPPI+AM L L+P +M+RWL+  A  VYL  ILL+ GKLN+ LFLN +FM+ DATEVF V  CL AV+ +AP   +RTGVGINAI+L+PL+LAPLK GLN LLIYM +G L+LPL ETLVIWLIGDLFTDFFV+YSVLV R+Y   Y   V + KM CEREGRKE E     E + A  MG       GG    +    G     +   +                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                        LG              HP++ W  SP +  D+  F+FF+++ IL+SFA+ILNHT + RQPLFYL SRLLFPV GYVTVRYGQLVSCF V  VA SMLVTDF +NEE+KTYGS+YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAE ALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPP P   G             ETADRVQYILAAGESLLRVVDDILELFRLSSTHSQ G QLL++N+TAVDIPSFFGTVCDLVEVI+KENG HFIKHLDP+LPRYL+IDRGRFSQLVMNLA NACKYSRPAGGV+SIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPE+KDRIFESFFRGGPS E                                                                                                                                                  G H   PP+  PP     +KAKGHGLGLAITKQLVDLLHG+I V+SSLGLGSLFSI LPAE+A+G S E+++               XXXXXXXXXXXXXXXXXVR+LKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAAL+ IDPSFDLILLDLQLPDMHGIDVLKTLR H+DP LA+MPIVVVSALVLDREKQECA AGADGFITKPVKL LLR+EIR LWDSGRLR+
Sbjct:   93 RARRTVFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNALLIYMCYGALNLPLSETLVIWLIGDLFTDFFVVYSVLVVRYYLQLYLIKVKEMKM-CEREGRKEPEDAGRAETANAIGMGGSLRVPHGGPGESSMGGAGRTTPALTNGESIYHFTQTRYENGGWGQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGG------QWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAG--------------------------------LAPGAGVRSQQYLAGASPPPLHVSSAETKAGSH-PFPPVLPPP--HRNYKAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESL---------------XXXXXXXXXXXXXXXXXVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPSFDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRR 1177

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: XP_005852803.1 (histidine kinase, partial [Nannochloropsis gaditana CCMP526] >XP_005856210.1 histidine kinase, partial [Nannochloropsis gaditana CCMP526] >EKU20160.1 histidine kinase, partial [Nannochloropsis gaditana CCMP526] >EKU23032.1 histidine kinase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 613.6 bits (1581), Expect = 1.300e-171
Identity = 316/379 (83.38%), Postives = 338/379 (89.18%), Query Frame = 0

Query:  439 HPLEVWFRSPHIGRDIFVFIFFVAIIILSSFASILNHTTVVRQPLFYLWSRLLFPVIGYVTVRYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSIYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAE 818
            HP++ W  SP +  D+  F+FF+++ IL+SFA+ILNHT + RQPLFYL SRLLFPV GYVTVRYGQLVSCF V  VA SMLVTDF +NEE+KTYGS+YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAE ALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPP P   G             ETADRVQYILAAGESLLRVVDDILELFRLSSTHSQ G QLL++N+TAVDIPSFFGTVCDLVEVI+KENG HFIKHLDP+LPRYL+IDRGRFSQLVMNLA NACKYSRPAGGV+SIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPE+KDRIFESFFRGGPS E
Sbjct:   88 HPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGG------QWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSME 460

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: EWM28872.1 (multi-sensor hybrid histidine kinase [Nannochloropsis gaditana])

HSP 1 Score: 291.2 bits (744), Expect = 1.500e-74
Identity = 275/785 (35.03%), Postives = 368/785 (46.88%), Query Frame = 0

Query:  488 SRLLFPVIGYVTVRYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSI----YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTN-EGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEI---ADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRE------------------------------------------------------------------LKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGID---PSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEIRGLWDSGRLR 1196
            SRL+ P++G+VT R+GQ  SC  +   AA +            TYG +     +T        L+ P ++V+++WS+++LAVALAE+QD L LL  +N QLL Q +EL++AKL A+ ALS+KTEFFARVS+EFRTPLN++LGF+EE+ +   P                    +R+ YI+ +GESLLR+VDDILELFRLSS       Q LQI+ + VDI ++F T+CDLV+VIT ++ +   +  DPSLPRY+ +D+ RFSQLVMNL+SNA K S   GG I +RL   +G  + G  G +                               A EA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                  +P                               F+S +         Q     KGHGLGLAITK+LVDL+ G I+V S +G+GSLF++ LP ++    +G  S  N G   R                           VR                                                                   L+I++VED+L NQ+VLGGML++D H V FVET   AL  +      FD+ LLD++LPD HG+ VL  +R H  PR+A MP+VVV+A+ +D E+  C   GAD F+TKP++L  LR  +  L+  GR++
Sbjct:  343 SRLMIPLLGFVTFRFGQFGSCVALIVAAAGIFTV---------TYGQLDRGDRLTDIFYQIDLLLGPIVVVLITWSMTFLAVALAEKQDGLSLLEKRNFQLLVQGRELQQAKLEAQRALSAKTEFFARVSYEFRTPLNIILGFAEEIKRQDLP----------------PYVQERIGYIITSGESLLRIVDDILELFRLSS-------QRLQIDESLVDIHAYFTTMCDLVQVITDKSQRRLERVQDPSLPRYVFLDKIRFSQLVMNLSSNAAK-STGTGGRIVLRLRQVKGRGKKGGKGVL--------------------------MNSREAREA-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEERIGNDAVRHKKGPGNEKTSPKIGSPKKEKRVAEGKGIGKSGRRRSHRVIWLRLEVEDDGIGIPKSTQNQIFNC---------------------FYSGN---------QLSGGEKGHGLGLAITKELVDLMKGSIEVVSEVGVGSLFTVDLPVKVLEEEEGKHSAQN-GRQLRRRPRAKRAGSPAGTTQGPEGNGQDPAGVRPPARASTRPLDPARXXXXXXXXXXXLSSPAPTLLEGDLRTSAVGVSPLMEAPSPFQQPLHRNRRLHGLRIMAVEDLLPNQMVLGGMLREDSHSVQFVETAFGALEMLSRHPGHFDVALLDIELPDAHGVTVLTRIRSHPSPRIAGMPVVVVTAVAMDGERNRCYRHGADDFVTKPIRLGTLRASLLALYKRGRIK 1026

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: XP_005853923.1 (histidine kinase [Nannochloropsis gaditana CCMP526] >EKU22434.1 histidine kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 253.8 bits (647), Expect = 2.700e-63
Identity = 265/786 (33.72%), Postives = 354/786 (45.04%), Query Frame = 0

Query:  488 SRLLFPVIGYVTVRYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSI----YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFS-QLVMNLASNACKYSRPAGGVISIRLTN-EGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEI---ADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRE------------------------------------------------------------------LKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGID---PSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEIRGLWDSGRLR 1196
            SRL+ P++G+VT R+GQ  SC  +   AA +            TYG +     +T        L+ P ++V+++WS+++LAVALAE+QD L LL  +N QLL Q +EL++AKL A+ ALS+KTEFFARVS+EFRTPLN++LGF+EE+ +   P                    +R+ YI+ +GESLLR+VDDILELFRLSS       Q LQI+ + VDI ++F T+CDLV+VIT ++            P       G  +  LVMNL+SNA K S   GG I +RL   +G  + G  G +                               A EA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                  +P                               F+S +         Q     KGHGLGLAITK+LVDL+ G I+V S +G+GSLF++ LP ++    +G  S  N G   R                           VR                                                                   L+I++VED+L NQ+VLGGML++D H V FVET   AL  +      FD+ LLD++LPD HG+ VL  +R H  PR+A MP+VVV+A+ +D E+  C   GAD F+TKP++L  LR  +  L+  GR++
Sbjct:  343 SRLMIPLLGFVTFRFGQFGSCVALIVAAAGIFTV---------TYGQLDRGDRLTDIFYQIDLLLGPIVVVLITWSMTFLAVALAEKQDGLSLLEKRNFQLLVQGRELQQAKLEAQRALSAKTEFFARVSYEFRTPLNIILGFAEEIKRQDLP----------------PYVQERIGYIITSGESLLRIVDDILELFRLSS-------QRLQIDESLVDIHAYFITMCDLVQVITDKS------------PAPAGTGSGSLAPTLVMNLSSNAAK-STGTGGRIVLRLRQVKGRGKKGGKGVL--------------------------MNSREAREA-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEERIGNDAVRHKKGPGNEKTSPKIGSPKKEKRVAEGKGIGKSGRRRSHRVIWLRLEVEDDGIGIPKSTQNQIFNC---------------------FYSGN---------QLSGGEKGHGLGLAITKELVDLMKGSIEVVSEVGVGSLFTVDLPVKVLEEEEGKHSAQN-GRQLRRRPRAKRAGSPAGTTQGPEGNGQDPAGVRPPARASTRPLDPARXXXXXXXXXXXLSSPAPTLLEGDLRTSAVGVSPLMEAPSPFQQPLHRNRRLHGLRIMAVEDLLPNQMVLGGMLREDSHSVQFVETAFGALEMLSRHPGHFDVALLDIELPDAHGVTVLTRIRSHPSPRIAGMPVVVVTAVAMDGERNRCYRHGADDFVTKPIRLGTLRASLLALYKRGRIK 1015

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: PDT89028.1 (hypothetical protein CO669_18050 [Bradyrhizobium sp. Y36])

HSP 1 Score: 141.4 bits (355), Expect = 1.900e-29
Identity = 151/668 (22.60%), Postives = 250/668 (37.43%), Query Frame = 0

Query:  534 SIYITSFSTLFQALVCP--------TLIVIVSWSISYLAVALA-------ERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGI-DPSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEI 1186
            S Y  + S LF A++ P        T+I +V+  + Y+  A+A        R++ LR+ R++   L     +LREAK AAE A S K +F A +SHE RTP+N +LG ++  +  P P  +                  RV  I ++ + LL+++DDIL++ +L         Q         D+      + +L+     E G      + P++PR+++ D+ R  Q++ NL  NA K++   G  +S+ +T   P ++    F      V+D G GIPPE + R+F+SF +G  S                                                                                                                                                                     + +  G GLGLAI K+LV+ + G+I+ +S+ GLGS F   LP   A+G +  D                                   R L +L VED+ +N  V  GML++ GHR   V++G  A+  +    FD +L+D+Q+PD+ G++  + +R  + P+ + +PIV ++A V+  + + C  AG DG + KP+ +  L + I
Sbjct:  180 SAYAPTVSLLFWAVLRPDPESPLDLTIIALVT-LVGYVVGAMARTQFNRLRREEYLRIAREQQINL-----DLREAKDAAEAAASVKADFLAVMSHEIRTPMNGILGMAKLALDDPLPPSQ----------------RRRVSTIRSSAQGLLKILDDILDISKLE-------RQADIYERAPFDVRQGLREIVNLMTPRAHEKGLTLQLAIAPTVPRWVLGDQSRLRQILFNLIGNALKFTSRGG--VSVEVTASCPQDEAVVVFC-----VEDTGIGIPPEQQARLFQSFAQGDASI--------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRFGGTGLGLAICKRLVEGMKGQIEAESTPGLGSRFRFSLPLPAAEGPAMRD--------------------------AADEAPEPARPLNLLLVEDLQINAAVARGMLERAGHRTALVKSGEQAIELVRSARFDAVLMDVQMPDVDGLEATRRIRALASPQ-SEVPIVALTANVMAEDVEACRAAGMDGHLAKPIDVAALHRAI 620

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: WP_097661192.1 (hypothetical protein [Bradyrhizobium sp. Y36])

HSP 1 Score: 141.4 bits (355), Expect = 1.900e-29
Identity = 151/668 (22.60%), Postives = 250/668 (37.43%), Query Frame = 0

Query:  534 SIYITSFSTLFQALVCP--------TLIVIVSWSISYLAVALA-------ERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGI-DPSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEI 1186
            S Y  + S LF A++ P        T+I +V+  + Y+  A+A        R++ LR+ R++   L     +LREAK AAE A S K +F A +SHE RTP+N +LG ++  +  P P  +                  RV  I ++ + LL+++DDIL++ +L         Q         D+      + +L+     E G      + P++PR+++ D+ R  Q++ NL  NA K++   G  +S+ +T   P ++    F      V+D G GIPPE + R+F+SF +G  S                                                                                                                                                                     + +  G GLGLAI K+LV+ + G+I+ +S+ GLGS F   LP   A+G +  D                                   R L +L VED+ +N  V  GML++ GHR   V++G  A+  +    FD +L+D+Q+PD+ G++  + +R  + P+ + +PIV ++A V+  + + C  AG DG + KP+ +  L + I
Sbjct:  174 SAYAPTVSLLFWAVLRPDPESPLDLTIIALVT-LVGYVVGAMARTQFNRLRREEYLRIAREQQINL-----DLREAKDAAEAAASVKADFLAVMSHEIRTPMNGILGMAKLALDDPLPPSQ----------------RRRVSTIRSSAQGLLKILDDILDISKLE-------RQADIYERAPFDVRQGLREIVNLMTPRAHEKGLTLQLAIAPTVPRWVLGDQSRLRQILFNLIGNALKFTSRGG--VSVEVTASCPQDEAVVVFC-----VEDTGIGIPPEQQARLFQSFAQGDASI--------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRFGGTGLGLAICKRLVEGMKGQIEAESTPGLGSRFRFSLPLPAAEGPAMRD--------------------------AADEAPEPARPLNLLLVEDLQINAAVARGMLERAGHRTALVKSGEQAIELVRSARFDAVLMDVQMPDVDGLEATRRIRALASPQ-SEVPIVALTANVMAEDVEACRAAGMDGHLAKPIDVAALHRAI 614

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BLAST of NO02G01550 vs. NCBI_GenBank
Match: WP_014261303.1 (PAS domain S-box protein [Desulfovibrio africanus] >EGJ51683.1 PAS/PAC sensor hybrid histidine kinase [Desulfovibrio africanus str. Walvis Bay])

HSP 1 Score: 137.9 bits (346), Expect = 2.200e-28
Identity = 142/620 (22.90%), Postives = 225/620 (36.29%), Query Frame = 0

Query:  588 EKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSE-ELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGR----------PGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGIDPS-FDLILLDLQLPDMHGIDVLKTLRG--HSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEIRGLWDSGR 1194
            E++LR+AK AAE A  +K+EF A +SHE RTP+N ++G +E  L++ P                   +  D +Q +  +  SLL +++DIL+L ++ +         +++     D+     ++ + + +  +  G  F   +DP +P ++  D GR  Q+ +NL  NA KY+    G +S+R+     VEDGR          P  + L   V+D G GIP +   RIFE F  G  SA                                                                                                                                                                      K  G GLGLAITK+LV+L+ GRI VQS LG GS FS     E A   ++ +  G                                R L+IL  ED  +N+ +   +L+  GH V  V+ G  AL  +    FDL+L+D+Q+P MHG +V + +R     DP    +PIV ++A  L  +++    AG D +++KP+ +  L + ++ +   G+
Sbjct:  443 EEDLRQAKQAAEAANQAKSEFLASMSHEIRTPMNGIIGLTELALMQEPK-----------------AKIRDYLQMVKQSANSLLDIINDILDLSKIEAGR-------VELEHADFDLRDMLDSLFETMRIGAERKGLSFSTAIDPGVPDWIKGDEGRLRQIFVNLIGNAIKYTE--AGQVSVRV----GVEDGRGAQDAGGRNTPERVCLVASVKDTGGGIPKDKLGRIFEPFDTGARSA----------------------------------------------------------------------------------------------------------------------------------------------------------------------KYDGTGLGLAITKRLVELMGGRITVQSELGRGSTFSFSAALEAASEAAASEGFG------------------------HAAVRPGARTLRILLAEDNEINRFLAVELLKGLGHEVTTVQDGRQALEILSKERFDLVLMDVQMPQMHGDEVTRRIRAGEAGDPH---VPIVALTAYALKGDRERFLAAGMDDYLSKPIDMQELERVLKRIGAVGK 839

[Close]

BLAST of NO02G01550 vs. NCBI_GenBank
Match: WP_100180602.1 (hypothetical protein [Bradyrhizobium sp. TSA1])

HSP 1 Score: 134.0 bits (336), Expect = 3.100e-27
Identity = 159/724 (21.96%), Postives = 266/724 (36.74%), Query Frame = 0

Query:  477 TVVRQPLFYLWSRLLFPVIGYVTVRYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSIYITSFSTLFQALVCPT-----------LIVIVSWSISYLA---VALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGI-DPSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVVVSALVLDREKQECALAGADGFITKPVKLNLLRKEI 1186
            T   Q  F+  + L+F        R+G L+    + A+A ++ V   F      T  S Y  + S LF A++ P            L+++V + +  +A        R++ LR+ R++   L     +LREAK AAE A S K +F A +SHE RTP+N +LG ++  +  P P  +                  RV  I ++ + LL+++DDIL++ +L         Q         D+      + +L+     E G      +  ++PR+++ D+ R  Q++ NL  NA K++   G  +++ +T   P ++    F      V D G GIPPE + R+F+SF +G  S                                                                                                                                                                     + +  G GLGLAI K+LV+ + G+I+ +S+ GLGS F   LP   ADG +  D                                   R L +L VED+ +N  V  GML++ GHR   V++G  A+  +    FD +L+D+Q+PD+ G++  + +R  + P+ + +PIV ++A V+  + + C  AG DG + KP+    L + +
Sbjct:  124 TYAHQIAFFTLNALVFDQPS--LTRHGGLL--LPLIAIALNLCVPGRF---RWVTLLSAYAPTVSLLFWAVLRPDPESPLDLTIIGLVILVGYVVGAMARTQFNRLRREEYLRIAREQQINL-----DLREAKDAAEAAASVKADFLAVMSHEIRTPMNGILGMAKLALDDPLPPSQ----------------RRRVSTIRSSAQGLLKILDDILDISKLE-------RQADIYERAPFDVRQGLREIVNLMSPRAHEKGLTLHLAISQTVPRWVLGDQSRLRQILFNLIGNALKFTSRGG--VTVEVTASRPQDEAVVVFC-----VADTGIGIPPEQQARLFQSFEQGDASI--------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRFGGTGLGLAICKRLVEGMKGQIEAESTPGLGSRFRFSLPLPAADGPAMRD--------------------------PADETPAPTRPLNLLLVEDLQINAAVARGMLERAGHRTALVKSGEQAIELVRSARFDAVLMDVQMPDVDGLEATRRIRALASPQ-SEVPIVALTANVMAEDVEACRAAGMDGHLAKPIDAAALHRAV 614

[Close]

BLAST of NO02G01550 vs. NCBI_GenBank
Match: SNS69698.1 (PAS domain S-box-containing protein [Azospirillum sp. RU38E] >SNS87793.1 PAS domain S-box-containing protein [Azospirillum sp. RU37A])

HSP 1 Score: 133.7 bits (335), Expect = 4.100e-27
Identity = 137/596 (22.99%), Postives = 219/596 (36.74%), Query Frame = 0

Query:  587 QEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYI---LAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGID-PSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLAS-MPIVVVSALVLDREKQECALAGADGFITKPVK 1178
            QE+ LR+A+  AE+A  +K +F A VSHE RTPLN V+GF++ L+    P                   A+R  YI     AG +LL V++D+L+  ++ +         L++   A +      T  DLV  + +E G   I  + P LP +L++D  R  Q+V+NL +NA K+++   G + +R   E  + +G+P    LRL V+D G GIPP  + ++FE F +   S                                                                                                                                                                       +  G GLGLAI K+LV L+ GRI V S  G GS F + +P    +  +    +                                 R L+IL  ED+ VNQ+++  +L++ GH+V  V  G AA+  +   + DL+L+D+Q+P M G++  + +R  + P +A  +PIV ++A  L  E + C  AG +  + KP++
Sbjct:  444 QEEALRQARREAEEAAKAKADFLATVSHELRTPLNAVIGFADLLLTANPP------------------EAERRHYIRLQAEAGRTLLAVINDVLDFSKIDAGR-------LELEEMASETVGLLQTCVDLVRPMAEEKGLRVILDIAPDLPPWLMLDPTRVRQIVLNLLNNAVKFTQ--AGHVGLRARVE--MVEGKP---FLRLAVEDTGIGIPPARQGKLFEPFHQADAST--------------------------------------------------------------------------------------------------------------------------------------------------------------------ARRYGGTGLGLAICKRLVSLMEGRIGVSSDAGRGSTFWVEVPLRPTEAPNHAPAL--------------------PTPGATGAGAVPARPLRILVAEDLPVNQLLIRAILERAGHQVEMVADGAAAVEAVQHHNVDLVLMDVQMPGMDGLEATRAIR--ALPSMAGRIPIVALTANALPAEVERCRRAGMNDHLAKPIE 821

[Close]

BLAST of NO02G01550 vs. NCBI_GenBank
Match: WP_089289014.1 (MULTISPECIES: PAS domain S-box protein [Azospirillum])

HSP 1 Score: 133.7 bits (335), Expect = 4.100e-27
Identity = 137/596 (22.99%), Postives = 219/596 (36.74%), Query Frame = 0

Query:  587 QEKELREAKLAAEDALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGXXXXXXXXXXXXXETADRVQYI---LAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTAVDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMNLASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPELKDRIFESFFRGGPSAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDLLHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALTGID-PSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLAS-MPIVVVSALVLDREKQECALAGADGFITKPVK 1178
            QE+ LR+A+  AE+A  +K +F A VSHE RTPLN V+GF++ L+    P                   A+R  YI     AG +LL V++D+L+  ++ +         L++   A +      T  DLV  + +E G   I  + P LP +L++D  R  Q+V+NL +NA K+++   G + +R   E  + +G+P    LRL V+D G GIPP  + ++FE F +   S                                                                                                                                                                       +  G GLGLAI K+LV L+ GRI V S  G GS F + +P    +  +    +                                 R L+IL  ED+ VNQ+++  +L++ GH+V  V  G AA+  +   + DL+L+D+Q+P M G++  + +R  + P +A  +PIV ++A  L  E + C  AG +  + KP++
Sbjct:  459 QEEALRQARREAEEAAKAKADFLATVSHELRTPLNAVIGFADLLLTANPP------------------EAERRHYIRLQAEAGRTLLAVINDVLDFSKIDAGR-------LELEEMASETVGLLQTCVDLVRPMAEEKGLRVILDIAPDLPPWLMLDPTRVRQIVLNLLNNAVKFTQ--AGHVGLRARVE--MVEGKP---FLRLAVEDTGIGIPPARQGKLFEPFHQADAST--------------------------------------------------------------------------------------------------------------------------------------------------------------------ARRYGGTGLGLAICKRLVSLMEGRIGVSSDAGRGSTFWVEVPLRPTEAPNHAPAL--------------------PTPGATGAGAVPARPLRILVAEDLPVNQLLIRAILERAGHQVEMVADGAAAVEAVQHHNVDLVLMDVQMPGMDGLEATRAIR--ALPSMAGRIPIVALTANALPAEVERCRRAGMNDHLAKPIE 836

The following BLAST results are available for this feature:

BLAST of NO02G01550 vs. NCBI_GenBank

BLAST of NO02G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM30516.1	2.400e-301	60.33	multi-sensor hybrid histidine kinase [Nannochlorop...	[more]
XP_005852803.1	1.300e-171	83.38	histidine kinase, partial [Nannochloropsis gaditan...	[more]
EWM28872.1	1.500e-74	35.03	multi-sensor hybrid histidine kinase [Nannochlorop...	[more]
XP_005853923.1	2.700e-63	33.72	histidine kinase [Nannochloropsis gaditana CCMP526...	[more]
PDT89028.1	1.900e-29	22.60	hypothetical protein CO669_18050 [Bradyrhizobium s...	[more]
WP_097661192.1	1.900e-29	22.60	hypothetical protein [Bradyrhizobium sp. Y36]	[more]
WP_014261303.1	2.200e-28	22.90	PAS domain S-box protein [Desulfovibrio africanus]...	[more]
WP_100180602.1	3.100e-27	21.96	hypothetical protein [Bradyrhizobium sp. TSA1]	[more]
SNS69698.1	4.100e-27	22.99	PAS domain S-box-containing protein [Azospirillum ...	[more]
WP_089289014.1	4.100e-27	22.99	MULTISPECIES: PAS domain S-box protein [Azospirill...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR033	ncniR033	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK006774	NSK006774	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G01550.1	NO02G01550.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|562613	gene_735	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100013g50	gene161	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G01550.1	NO02G01550.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G01550 ID=NO02G01550|Name=NO02G01550|organism=Nannochloropsis oceanica|type=gene|length=4473bp
CTTGCCTTCTTTCGTCTCTTTTTCTTAACGCCTAAAGGGTTACTCCTCAC
TCCACCATCAACAAGTCTGCACCAGCGGGACACGAACCATTTAAGACAGG
AGTGCAAAAAGTGGTGTCAACGTAAAATGTGCCTGCGCCTACAAAAGGAA
TCAAGCCGAGCCAGCAGAGAGATAGTAATTGTCCTGTCGAAAGGGAAGCC
TCACGGTTCAACTCGATGTACATAGCAAGCGGGGAGCTGGGCCATAGGCG
AGTGAATCCGAAGAACATGGTTTACCGATGTTGTTTACCGTCTCTCGGTC
CAATTGAGCGAAGCTTCCATGCATGATACGATGGTACCAGCAGAAGCAAA
CTTCAGCCTCATCCATCGCTCGTCTGGATTCGCATACTATTTCCTTTCCT
TTGATTTACCTCTGCAGCGATATGATAATACAAGAAAGAGATACTCAAAC
GAAAGGGACACGTCTTGCCGGCCCGGGCGCTTCGGTGAATTTTTGTCTTT
CTCAAAACAGTGCCAGCTCTGTTTAACCAGGCTTGAGCGGGAGAGTTGAC
CCCCTCCCCTTCCCTTCCGTTCCCCCCCCTCCCCCCCACTTTCCACGGGC
GTGCGACATTTACTTGGAGCATAGGCACCGCATCATTTTGCGTCATCTTG
TAGGCACCATCGTCCACATTCTCTTTCATCAACCCCTTTTTCCAGAGCAT
ACAGGGATGGTCACTGCTCAAGACACCCGCTTCAGTCATCAGGAATAATG
ATAAGGGATGGCTCTGGGGAAGGCCGACCGCCAGTCAGAGGCGGCGTAGC
GTCCTACTCCCCTTACCCTTATCCTTCCGGTAGCCCCCCTTTGGTGTCCT
CCTACCCCCATCACCACGATGACCACGCTTCGCACAACCTCACGGAGAAT
CAACAGCAGCAGCTGAAGAAATTCAAGAAACAGATGGTAGCCGGACGAGT
ACGACGGACGATAGGCCTGTGCGTACTCTGCGCATTATGCATGGCGGGAA
GCATGCTGTTGGGGGCCAGAGTGCTTTCCCTCGGCGGGACGGCGCTCTTC
TGGCCAGGCCCACCGATCCTTGCCATGTTTTTGGCGTTGAATCCTTCGTG
GATGCGGCGGTGGTTGTCTATGGCAGCGCTTCTCGTGTATTTAACGTGTA
TCCTCTTGAATAGTGGGAAGCTCAACGATAGTTTATTCCTCAACTTCGTC
TTCATGATAGTTGACGCCACGGAGGTGTTCTGCGTCACGGTGTGTCTGCA
CGCGGTCATGCAGGTGGCGCCTCCAGGCTTCGTTCGGACGGGGGTAGGGA
TAAATGCAATCATGCTTTATCCTTTGCTGCTGGCACCGTTGAAGGTGGGT
TTGAACACTTTGTTAATCTACATGACTTTCGGCCCGTTGCATCTACCGCT
GTTTGAAACCCTTGTCATCTGGTTGATAGGCGACTTGTTCACGGATTTTT
TTGTCTTATATTCAGTGTTGGTGTTTCGATTTTATTGGTTACAGTATCGG
GAATTGGTGGATGATTGGAAAATGACGTGTGAGAGAGAAGGGAGGAAGGA
GAAGGAGAAGGAGAGAATGAAGGAGGAGTCGGCGGCGGGTAGTATGGGGA
GAGAAGCTGCACACGTAGGGGGAGGCCTAGCGAGGCCTGCTCGGGCAGAT
GTTGGAAATATTGAGATGATGGTGTGTCAGAAGAAAGGTGAAGATGACGA
GGGGGAGGAAGAGAAAGATGATAGCGACGGCGAAAGTGACTACACCGACT
ATGGAGAAGAGACGGAGGAGGAGGGAGAGGAGGAGGAGGAGGAGGAGGAG
GAGGTCGAGGGGAAGGGGGAGGAAGAAGGTCACCACGAGACGAACAGCAA
CATTGTCAAGAGCAGTTCGGAGCCGCAAGTCGAGGAGGAGTGGCTGCGTG
GTGCTAAGCGCTCTTCTTCCACCAAGGGCGGCGGGACGGCTGACCGGCAA
GAGGGCCGCAATGGTGGCTGTGTAGCGGGCAAGGGCGAAGCCAGCTATGG
AAGCGGCAGTACTGAACAGCAGCAACAGCAGCAGCAGCATCACCCTAAGC
TAGGCGAGGCCCACCCTCTGGAGGTCTGGTTCAGATCTCCCCACATCGGC
CGAGACATATTCGTCTTTATTTTCTTCGTGGCCATCATTATTTTGTCATC
GTTTGCTTCCATCCTTAACCATACGACCGTTGTGCGTCAGCCGTTATTTT
ATTTGTGGAGTCGGTTACTCTTTCCTGTGATCGGGTACGTGACTGTCCGG
TATGGGCAGTTGGTGTCGTGCTTCAATGTGGCGGCTGTGGCGGCGAGTAT
GCTGGTGACGGATTTTTTCATCAACGAGGAGAAGAAAACGTACGGTTCGA
TTTACATCACCTCCTTCAGCACCTTGTTCCAGGCTTTGGTTTGCCCAACG
TTGATTGTAATTGTGTCGTGGTCCATCTCCTACCTGGCTGTCGCCCTGGC
GGAACGCCAGGACACCTTGAGGCTGCTTCGTGATAAAAACGCCCAGCTTC
TGGCACAAGAAAAAGAACTTCGAGAAGCCAAACTGGCTGCCGAGGATGCC
CTTTCGTCCAAGACAGAATTTTTTGCGCGGGTCTCTCACGAATTTCGAAC
TCCTCTGAATGTTGTGCTGGGTTTCTCGGAAGAGTTGATCAAACCGCCAT
CACCAGTGGGGAGAGGGGGAGAGGGAGGACAGGGGGCAATGACGACCATA
ACACCAGAAACGGCCGACCGAGTGCAGTATATATTGGCTGCCGGGGAAAG
TCTCTTGAGGGTCGTGGATGACATATTAGAGTTGTTTCGTCTGTCCTCCA
CGCACTCCCAGACAGGGACACAGCTGTTGCAGATTAATTTGACGGCTGTT
GATATCCCGAGTTTCTTTGGGACGGTTTGCGATTTGGTCGAGGTCATAAC
CAAGGAAAACGGGCAGCATTTCATCAAGCACCTTGATCCCTCCCTCCCTC
GCTACCTCGTCATTGATCGAGGGCGATTTTCCCAGCTTGTGATGAACCTG
GCATCGAACGCGTGCAAGTACAGCCGCCCTGCAGGGGGTGTGATCTCCAT
CCGGTTGACGAATGAAGGGCCTGTGGAGGATGGGAGACCTGGTTTCATCA
CCCTGAGGTTGGACGTGCAAGACAATGGCCCCGGCATCCCTCCGGAGCTG
AAAGATCGAATTTTCGAGTCGTTTTTTCGCGGGGGGCCATCGGCGGAGGA
GGCAGAGATGGAGGCGGAGGAAGCAGCAATTGCGGCAGCGGCAGGGGCGC
CATATTATTATCCTTTGCCGACTACGGGTGGGGGGGGGGGGAGAGATGAT
GGGATACGTAAGCCTCTGACGGCGACACAGCACTTTCAACAGCAGCAAAT
GGAGCAGCAGGAGCAGTATCAGCACCAGCAGCACCACTACGCTAATGCTT
ATCACCCTTTTCCGTCCTCCTCCACCACCACCTCCTCTTCCTCCTCTTCC
ACACCTGCTTCCTCTCCCACTTTCACCAGCCTAAAAAGCACCCATCCCGT
CTCCGGAAGTCACTTCGTCGGCAGGCGCAACCCTCATCCCCTCCCCCCTC
CTTCCTCCCCTCCCTCCTCCTACCCTCCCTCCTCCTACGCCTCCCTTTCC
CCAACCCATGCCGCCGCCGCCAGTGCCGCTATTGCTGGGTTTCACTCGGC
GTCTCCTCCCCTTTTTCTTCCTCCCACCCAACAGCACCAGCACAAGGCCA
AAGGCCACGGACTCGGATTAGCAATCACGAAGCAATTAGTAGATTTATTG
CATGGACGAATAGACGTTCAATCGTCTTTGGGACTGGGCAGCTTGTTTTC
AATTTTTTTACCGGCCGAGATCGCGGACGGATGCAGCAGTGAGGATAACA
TGGGGGTGCATGAGAGAGGAGGAGGAGGAGGAGGAATCGTCGGAGGAGGA
ATTGGGATGGGGGGCGGAGGAGGGGGGGCGGGGGGGGAGGCTCCGCCGGT
GAGGGAGTTGAAGATTTTGTCTGTGGAGGACATATTGGTGAACCAGATCG
TGTTGGGAGGGATGTTGCAGCAGGATGGACATCGGGTGGTCTTCGTGGAG
ACGGGGACGGCGGCACTGACAGGAATTGACCCGAGTTTTGATTTGATACT
GCTGGATTTGCAGTTACCTGATATGCATGGCATTGATGTGTTGAAAACCT
TGAGGGGGCACAGTGATCCGCGGTTGGCTTCCATGCCCATCGTGGTGGTT
TCGGCGTTGGTTCTGGATAGGGAGAAGCAGGAGTGTGCCTTGGCGGGCGC
GGACGGGTTTATTACCAAGCCGGTCAAATTGAATCTGTTGAGGAAGGAGA
TCAGGGGCTTGTGGGACTCGGGGAGGTTGAGGAAGGGTGGGAAGAGGGGG
GATGAAGAAGAAGAGGAAGGGAAGGAGGACAATGGAAAGGTGGGTGGAGG
CGGGCACGGGTGGGTGGTGGAAGAGGAAGTACAGGCGAAGGAGGGGATGA
CTTTAGACGATTCTCGGTGTTAA

protein sequence of NO02G01550.1

>NO02G01550.1-protein ID=NO02G01550.1-protein|Name=NO02G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1242bp
MIRDGSGEGRPPVRGGVASYSPYPYPSGSPPLVSSYPHHHDDHASHNLTE
NQQQQLKKFKKQMVAGRVRRTIGLCVLCALCMAGSMLLGARVLSLGGTAL
FWPGPPILAMFLALNPSWMRRWLSMAALLVYLTCILLNSGKLNDSLFLNF
VFMIVDATEVFCVTVCLHAVMQVAPPGFVRTGVGINAIMLYPLLLAPLKV
GLNTLLIYMTFGPLHLPLFETLVIWLIGDLFTDFFVLYSVLVFRFYWLQY
RELVDDWKMTCEREGRKEKEKERMKEESAAGSMGREAAHVGGGLARPARA
DVGNIEMMVCQKKGEDDEGEEEKDDSDGESDYTDYGEETEEEGEEEEEEE
EEVEGKGEEEGHHETNSNIVKSSSEPQVEEEWLRGAKRSSSTKGGGTADR
QEGRNGGCVAGKGEASYGSGSTEQQQQQQQHHPKLGEAHPLEVWFRSPHI
GRDIFVFIFFVAIIILSSFASILNHTTVVRQPLFYLWSRLLFPVIGYVTV
RYGQLVSCFNVAAVAASMLVTDFFINEEKKTYGSIYITSFSTLFQALVCP
TLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAED
ALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPSPVGRGGEGGQGAMTT
ITPETADRVQYILAAGESLLRVVDDILELFRLSSTHSQTGTQLLQINLTA
VDIPSFFGTVCDLVEVITKENGQHFIKHLDPSLPRYLVIDRGRFSQLVMN
LASNACKYSRPAGGVISIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPE
LKDRIFESFFRGGPSAEEAEMEAEEAAIAAAAGAPYYYPLPTTGGGGGRD
DGIRKPLTATQHFQQQQMEQQEQYQHQQHHYANAYHPFPSSSTTTSSSSS
STPASSPTFTSLKSTHPVSGSHFVGRRNPHPLPPPSSPPSSYPPSSYASL
SPTHAAAASAAIAGFHSASPPLFLPPTQQHQHKAKGHGLGLAITKQLVDL
LHGRIDVQSSLGLGSLFSIFLPAEIADGCSSEDNMGVHERGGGGGGIVGG
GIGMGGGGGGAGGEAPPVRELKILSVEDILVNQIVLGGMLQQDGHRVVFV
ETGTAALTGIDPSFDLILLDLQLPDMHGIDVLKTLRGHSDPRLASMPIVV
VSALVLDREKQECALAGADGFITKPVKLNLLRKEIRGLWDSGRLRKGGKR
GDEEEEEGKEDNGKVGGGGHGWVVEEEVQAKEGMTLDDSRC*

Synonyms

Publications