NO02G01400, NO02G01400 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G01400
Unique Name	NO02G01400
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2192
Alignment location	chr2:417623..419814 +

Link to JBrowse

Properties


Property Name	Value
Description	4-phospho-panto-thenoylcysteine synthetase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:417623..419814 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035929	CoaB-like_sf
IPR007085	DNA/pantothenate-metab_flavo_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process

Homology

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BLAST of NO02G01400 vs. NCBI_GenBank
Match: GAX93342.1 (Hypothetical protein PINS_001252 [Pythium insidiosum])

HSP 1 Score: 252.7 bits (644), Expect = 3.400e-63
Identity = 152/520 (29.23%), Postives = 275/520 (52.88%), Query Frame = 0

Query:   87 LAIVTSGSVPTPLDTDSVNYLDTLGSGN--RAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFLDQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRH-KADSPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRREMEME 604
            +A+VTSG+   PLD     ++D        +  ACAE  L  GY VIF++R+ S +PF+R   K ++    L     L+ +  ++ L +D ++ +R   ++  Y   K RLL VSF+ + +YL+LLR + +A    +  A++ +AA + + ++P  +   P+++    G+ ++    VP++IR  R+ WCP+AF+V FK       ++E AH  LE+ GV +V G    E   ++L+V+ ++E  +  P + ++  +   ++   H+ F   +E L+  + LL L+AKF ML+E +  ++ DA G K V F  G++I ADR     +P+YELK ++  K   ARA++W+  IE +                                      A G  ++++ FSPAGNPETI S+WGD + GW E+E+  +     ++ L++ L ++AS ++ D+T  ++L+  + + I +AW   E+T+  QS  N++++  +R L+    +   +E++ + R    +
Sbjct:   62 IALVTSGATAVPLDPAVHTFVDQSSQVQEYQGPACAEYLLHLGYAVIFVHREDSQQPFTRHFRKYIQNGAFLE---MLHLQNDQIVLDVDQNQRSRFANIVHHYRDSKDRLLNVSFTSVQQYLHLLRLSTKAINAAKSRAIVILAASVMEFYVPVQQNRSPTSSQRRNGEFSVNFVRVPNLIRKIRKKWCPKAFVVTFKHHLKDNEMIEQAHEDLEKWGVDVVAGTNRHEYPHQILLVSAQEESIVSCPEDEDINDAFASSIAELHRNFRRTREILEKGKQLLILTAKFAMLKE-RDAINEDADGNKNVKFGKGVKICADRRVSGKAPVYELKHIFQNKSHCARAHVWESKIEHKSG------------------------------------ASGL-DVVVAFSPAGNPETIKSVWGDFWSGWAEKELIEVKDQLVNVSLSSALGVVASSISGDYTPASNLIQYMWSKIGTAWTDGEQTRIRQSLQNMIAVGLNRGLVEATDITPLEEIIRKPRTQRFD 540

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BLAST of NO02G01400 vs. NCBI_GenBank
Match: OQR92318.1 (hypothetical protein ACHHYP_03818 [Achlya hypogyna])

HSP 1 Score: 251.5 bits (641), Expect = 7.500e-63
Identity = 188/606 (31.02%), Postives = 297/606 (49.01%), Query Frame = 0

Query:   45 SDAATQIRTFIEQEEQEQSPGSQTFPPISHDEFTSALLPITRLAIVTSGSVPTPLDTDSVNYLDTLGSGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFLD----------QGKEALKLYPV--PHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHE---NELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD-SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTA----DFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRREMEMEEEWGRGGSVSSXXXXXXXXVRFGRSPR 631
            SD+   ++ F +    +++    ++        T  +    R+A+VTSGS   PL+T     +D +  G+R AA AE+FLR GY VIFL+R GSL PFSR   +R  + +      Q++ +   V    DAD +A + +VL + ++   RL  + F+ + +YLY LR A  A  P+    L+ + A +   ++P    T    + L+          + K+AL L  V  P++IR  R+ + P AFLV  K   D   + E A+  +ER GV LVV N     +   LI +E++E  +V+P +    E++     ++V  H+ F   +  LK S+SLL ++AKF+M++EN   ++ DA G K VPFKVG+RI+ DR   D SPIYELK+++   G  ARA++WQRV                                            G   +++ FSPAG P+T+ +LWGD + GW E E+        H+ L + L  LA  +TA    D++    +L+ + + I SAW   E+T+  QS  N++++ F+R L+      D   + D R  M+      R G+++S            R PR
Sbjct:   18 SDSDVYVKQFFDTTPPDEAWAMDSYRDAVTAFVTEHVADGRRVALVTSGSATVPLNTQ--GSMDAVSYGDRGAASAEQFLRAGYAVIFLHRQGSLAPFSRHF-QRYIQDNVFMSMCQMDDEGSLVFRSDDADRKAFIAEVLESSQATSSRLFHLRFTTVQQYLYYLRMAASALEPVGTRGLILLGASVLDYYVPPSSATAAIYSSLNADSMPTSPSRKEKDALTLNLVRTPNLIRKIRKEFAPTAFLVTLKAIEDKNLMHEAAYNDIERWGVDLVVANSPMLPDELALI-SEQEEF-IVAPKKLDGVEIDTLCAASLVEAHRNFTTSRAILKQSKSLLLMTAKFSMMKEN-DTLNVDADGNKNVPFKVGIRIRVDRSLGDASPIYELKSIFQNHGHCARAHIWQRV-------------------------------------------DGDENVMVAFSPAGTPDTVRALWGDFWGGWAENEIAEFKEQMGHLSLGSALYGLAQGVTATVGGDYSQAHQMLSYIGSKIGSAWSDGEQTRIRQSIQNMLAVNFNRGLVEWG---DLHSVDDIRFAMQTHPALQRSGTMTSQEADMLLQTSLRRKPR 571

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: POM71166.1 (DFP domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 246.9 bits (629), Expect = 1.800e-61
Identity = 166/568 (29.23%), Postives = 280/568 (49.30%), Query Frame = 0

Query:   75 DEFTSALLPITR-LAIVTSGSVPTPLDTDSVNYLDTL--GSGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFLDQGKE---------------------------------------ALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRH--KADSPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            +EF +A L   R +A++TSG+   PLD ++  ++D        +  ACAE  L+ GY VIF++R+ SLRPF+R   K + +  A  D  +L    G V   +D  ++ +  ++   Y     R+L +SF+ + +YL L R   +A    +   ++ +AA L   ++P      PSA  ++   E                                       ++    VP+IIR  R+ WCP+AFLV FK    +   +E AH  LE+ GV ++ G+     +R +L++TE++E  +  P + ++  +   A+   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR    A +P+YELK ++  K   ARA++W+ ++E                                +P + +T      ++++ FSPAGNPETI  +WGD + GW E+E++        I L++ + ++ S ++ D+   + LL  + + I  AW   EKT+  QS  N+M++A DR      G+   ++L+ + R
Sbjct:   78 EEFIAAQLATRRGIALITSGATIVPLDPENDTFVDVTPQDQEQQGPACAEYLLQLGYAVIFVHREDSLRPFTRHFQKYI-QNGAFMDMFRLQD-NGLVLSGLDISQQLQFQKIAQVYTECSTRVLNLSFTSVQQYLMLTRLTAKAMEVAKDRGIVVLAATLMDFYVP----VDPSAAAMEVADENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDEFSVNFVRVPNIIRKIRKDWCPKAFLVTFKHHLASGEDIEAAHADLEKWGVDVIAGH---HHSREILLITEQEEAIVTCPDDEDINDAFASAIADMHRSFRRKREILARGKQLLLLSAKFSMLKEN-DVVNEDADGNKNVQFGLGVKIRADRRAPNAIAPVYELKHIFQNKSHCARAHVWEGMVE--------------------------------HPASGST-----RDVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGISLSSAINLVTSSVSGDYEPASQLLKFMWSKIGHAWSDGEKTRIRQSIQNMMAVALDRGFTEPAGISILEKLMRKPR 598

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: XP_008892378.1 (hypothetical protein PPTG_02829 [Phytophthora parasitica INRA-310] >ETI49425.1 hypothetical protein F443_06739 [Phytophthora parasitica P1569] >ETK89303.1 hypothetical protein L915_06612 [Phytophthora parasitica] >ETL42757.1 hypothetical protein L916_06550 [Phytophthora parasitica] >ETM49070.1 hypothetical protein L914_06523 [Phytophthora parasitica] >ETN23180.1 hypothetical protein PPTG_02829 [Phytophthora parasitica INRA-310] >ETP19198.1 hypothetical protein F441_06742 [Phytophthora parasitica CJ01A1] >ETP47127.1 hypothetical protein F442_06775 [Phytophthora parasitica P10297] >KUF99230.1 Transcription elongation factor A protein 1 [Phytophthora nicotianae])

HSP 1 Score: 242.7 bits (618), Expect = 3.500e-60
Identity = 164/564 (29.08%), Postives = 276/564 (48.94%), Query Frame = 0

Query:   75 DEFTSALLPITR--LAIVTSGSVPTPLDTDSVNYLDTLG--SGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFL----------------------------------DQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD--SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            +EF ++ L   R  +A++TSG+   PLD ++  ++D        R  ACAE  L+ GY VIF++R+ SLRPF+R   K + +  A  D  ++    G V   MD  ++ +  ++   Y     R+L +SF+ + +YL L R   +A    +  A++ +AA L   ++P       +                                         + ++    VP+IIR  R+ WCP+AFLV  K +  +   +E AH  LE+ GV ++ GN     +R +L++TE++E  +  P + ++  +   A+   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR   D  +P+YELK ++  K   ARA++W+ V+E                                +P++  T      ++++ FSPAGNPETI  +WGD + GW E+E++        I L++ + ++ S ++  +   + LL  + + I  AW   EKT+  QS  N+M++A DR      G+   ++L+ R R
Sbjct:   78 EEFIASQLAHNRRGIALITSGATIVPLDPENDTFVDVAPQVQEQRGPACAEYLLQLGYAVIFVHREDSLRPFTRHFQKYI-QNGAFMDMFRMQD-NGLVLSGMDISQQLQFQKIAQLYTECSTRVLNLSFTSVQQYLMLTRITAKAMEVAKDRAIVVLAATLMDFYVPVDPSVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQSDEFSVNFVRVPNIIRKIRKDWCPKAFLVTCKHQLASGEDIEDAHADLEKWGVDVIAGN---HYSREILLITEQEEAIVTCPDDEDINDAFASAIADMHRSFRRKREILVRGKQLLLLSAKFSMLKEN-DVVNEDANGNKNVQFGLGVKIRADRRAPDAIAPVYELKHIFQNKSHCARAHVWEGVVE--------------------------------HPLSEPT-----RDVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGISLSSAINLVTSSVSGHYEPASQLLKFMWSKIGHAWSDGEKTRIRQSIQNMMAVALDRGFTEPAGISILEKLMRRPR 598

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: ETL95906.1 (hypothetical protein L917_06421 [Phytophthora parasitica])

HSP 1 Score: 242.7 bits (618), Expect = 3.500e-60
Identity = 164/564 (29.08%), Postives = 276/564 (48.94%), Query Frame = 0

Query:   75 DEFTSALLPITR--LAIVTSGSVPTPLDTDSVNYLDTLG--SGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFL----------------------------------DQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD--SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            +EF ++ L   R  +A++TSG+   PLD ++  ++D        R  ACAE  L+ GY VIF++R+ SLRPF+R   K + +  A  D  ++    G V   MD  ++ +  ++   Y     R+L +SF+ + +YL L R   +A    +  A++ +AA L   ++P       +                                         + ++    VP+IIR  R+ WCP+AFLV  K +  +   +E AH  LE+ GV ++ GN     +R +L++TE++E  +  P + ++  +   A+   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR   D  +P+YELK ++  K   ARA++W+ V+E                                +P++  T      ++++ FSPAGNPETI  +WGD + GW E+E++        I L++ + ++ S ++  +   + LL  + + I  AW   EKT+  QS  N+M++A DR      G+   ++L+ R R
Sbjct:   78 EEFIASQLAHNRRGIALITSGATIVPLDPENDTFVDVAPQVQEQRGPACAEYLLQLGYAVIFVHREDSLRPFTRHFQKYI-QNGAFMDMFRMQD-NGLVLSGMDISQQLQFQKIAQLYTECSTRVLNLSFTSVQQYLMLTRITAKAMEVAKDRAIVVLAATLMDFYVPVDPSVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQSDEFSVNFVRVPNIIRKIRKDWCPKAFLVTCKHQLASGEDIEDAHADLEKWGVDVIAGN---HYSREILLITEQEEAIVTCPDDEDINDAFASAIADMHRSFRRKREILVRGKQLLLLSAKFSMLKEN-DVVNEDANGNKNVQFGLGVKIRADRRAPDAIAPVYELKHIFQNKSHCARAHVWEGVVE--------------------------------HPLSEPT-----RDVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGISLSSAINLVTSSVSGHYEPASQLLKFMWSKIGHAWSDGEKTRIRQSIQNMMAVALDRGFTEPAGISILEKLMRRPR 598

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: XP_009518881.1 (hypothetical protein PHYSODRAFT_541206 [Phytophthora sojae] >EGZ23593.1 hypothetical protein PHYSODRAFT_541206 [Phytophthora sojae])

HSP 1 Score: 241.9 bits (616), Expect = 5.900e-60
Identity = 165/576 (28.65%), Postives = 280/576 (48.61%), Query Frame = 0

Query:   75 DEFTSALLPITR--LAIVTSGSVPTPLDTDSVNYLDTLG--SGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFLDQGKE----------------------------------------------ALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD--SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            ++F +A L   R  +A++TSG+   PLD ++  ++D        +  ACAE  L+ GY VIF++R+ SLRPF+R   K + +  A  D  +L    G +   +D  ++ +  ++   Y     R+L +SF+ + +YL L+R   RA    +   ++ +AA L   ++P   +  P+A                                                      ++    VP++IR  R+ WCP+AFL+  K + D+   +E AH  LE+ GV ++ GN     +  +L++TE++E  +  P + ++  S   AV   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR   D  +P+YELK ++  K   ARA++W+ ++E                                +P +  T      ++++ FSPAGNPETI  +WGD + GW E+E++        + L++ + I+ S ++ D+   + LL  + + I +AW   EKT+  QS  N+M++A DR L    G+   ++L+ R R
Sbjct:   80 EQFIAAQLADKRRGIALITSGATIVPLDPENDTFVDVAPQVQEQQGPACAEYLLQLGYAVIFVHREDSLRPFTRHFQKYI-QNGAFMDMFRLQD-NGLMLSGVDISQQLQFQKIAQLYTECSTRVLNLSFTSVQQYLMLVRLTARAMEVAKDRGVVVLAATLMDFYVP---VDPPAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSVNFVRVPNMIRKIRKDWCPKAFLITCKHQLDSGEDIEAAHADLEKWGVDVIAGN---HHSNEILLITEQEETIVTCPEDEDINDSFASAVADMHRSFRRKREILSRGKQLLLLSAKFSMLKEN-DVVNEDADGNKNVQFGLGVKIRADRRAPDAIAPVYELKHIFQNKSHCARAHVWEGIVE--------------------------------HPSSEPT-----RDVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGMSLSSAINIVTSSVSGDYEPASQLLKFMWSKIGNAWSDGEKTRIRQSIQNMMAVALDRGLTEPAGISILEKLMRRPR 609

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: XP_008860898.1 (hypothetical protein H310_00058 [Aphanomyces invadans] >ETW09487.1 hypothetical protein H310_00058 [Aphanomyces invadans])

HSP 1 Score: 240.4 bits (612), Expect = 1.700e-59
Identity = 178/612 (29.08%), Postives = 288/612 (47.06%), Query Frame = 0

Query:   42 ASSSDAATQIRTFIEQEEQEQSPGSQTFPPISHDEFTSALLPITRLAIVTSGSVPTPLDTDSVNYLDTLGSGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTD-QVQLNSKTGRVELVMDADEEAR----MTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIP----------------RHELTRPSATFLDQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHEN--ELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHK------------ADSPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTA----DFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRREMEMEEEWGRGGSVSS 615
            A  +D+   +  F +    E S     +P       T+ L    R+A+VT GS   PL  DSV  +D +  G+R AA AE FLR GY VIFL+R+GSL PFSR     ++    L+  +V     +  V+   DAD+       ++ +L      K RL+ ++F+ + +YL+ LR A  A        L+ ++A +   ++P                                  L L  +P++I   R+ + P+A LV  K   D   +   A R +ER GV +VV +     N   LI  + + +  VSPH+   ELE      +V  H+ ++  ++ LK  ++LL L+AKF+M++EN   ++ DA G K VPFK G+RI+ DRH+            + SP+YEL A++  K   ARA++W+RV + +                                           E+++ FSPAGNPETI SLWGD + GW E E+        H+ L++ L  LA  +TA    D++    +L  + + + +AW + E+T+  QS+ N++++ F+R LM ++GL D ++L   +   +      R  +++S
Sbjct:   15 AVPADSDAYVNKFFDNTVVEPSWAMDVWPDKLKQFVTTQLTDGRRIALVTCGSATVPLPGDSV--MDAVSFGDRGAASAEHFLRAGYAVIFLHREGSLAPFSRHFQLYIRDNRFLSMLRVDAADNSLHVDPPEDADDTESLIPDLSTLLAEANETKSRLMHITFTTVQQYLFYLRMATTALDSAASRGLILLSASILDYYVPSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTLNLVRIPNLIAKIRREYAPKACLVTLKSVADKGRMQSAAFRAIERWGVDIVVADSPMLPNELALISAQEEFV--VSPHDGGVELEVVCAAMLVEMHRAWSTRRQILKQGKALLLLTAKFSMMKEN-DTLNEDAMGNKNVPFKRGIRIRTDRHRPSASATSPKQTGSTSPVYELDAIFQNKSHCARAHVWKRVADCDDSVK---------------------------------------EIMVAFSPAGNPETIRSLWGDLWNGWDEHEIADFKEQIGHVTLSSALYGLAQGVTATVGGDYSHAHAMLGYIYSKLGTAWSEGEQTRIRQSFENMVAVNFNRGLMEMDGLNDIEDLRQAKAMAQCHAPLERSNTMTS 582

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: XP_008860899.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW09488.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 240.4 bits (612), Expect = 1.700e-59
Identity = 178/612 (29.08%), Postives = 288/612 (47.06%), Query Frame = 0

Query:   42 ASSSDAATQIRTFIEQEEQEQSPGSQTFPPISHDEFTSALLPITRLAIVTSGSVPTPLDTDSVNYLDTLGSGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTD-QVQLNSKTGRVELVMDADEEAR----MTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIP----------------RHELTRPSATFLDQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHEN--ELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHK------------ADSPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTA----DFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRREMEMEEEWGRGGSVSS 615
            A  +D+   +  F +    E S     +P       T+ L    R+A+VT GS   PL  DSV  +D +  G+R AA AE FLR GY VIFL+R+GSL PFSR     ++    L+  +V     +  V+   DAD+       ++ +L      K RL+ ++F+ + +YL+ LR A  A        L+ ++A +   ++P                                  L L  +P++I   R+ + P+A LV  K   D   +   A R +ER GV +VV +     N   LI  + + +  VSPH+   ELE      +V  H+ ++  ++ LK  ++LL L+AKF+M++EN   ++ DA G K VPFK G+RI+ DRH+            + SP+YEL A++  K   ARA++W+RV + +                                           E+++ FSPAGNPETI SLWGD + GW E E+        H+ L++ L  LA  +TA    D++    +L  + + + +AW + E+T+  QS+ N++++ F+R LM ++GL D ++L   +   +      R  +++S
Sbjct:   15 AVPADSDAYVNKFFDNTVVEPSWAMDVWPDKLKQFVTTQLTDGRRIALVTCGSATVPLPGDSV--MDAVSFGDRGAASAEHFLRAGYAVIFLHREGSLAPFSRHFQLYIRDNRFLSMLRVDAADNSLHVDPPEDADDTESLIPDLSTLLAEANETKSRLMHITFTTVQQYLFYLRMATTALDSAASRGLILLSASILDYYVPSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTLNLVRIPNLIAKIRREYAPKACLVTLKSVADKGRMQSAAFRAIERWGVDIVVADSPMLPNELALISAQEEFV--VSPHDGGVELEVVCAAMLVEMHRAWSTRRQILKQGKALLLLTAKFSMMKEN-DTLNEDAMGNKNVPFKRGIRIRTDRHRPSASATSPKQTGSTSPVYELDAIFQNKSHCARAHVWKRVADCDDSVK---------------------------------------EIMVAFSPAGNPETIRSLWGDLWNGWDEHEIADFKEQIGHVTLSSALYGLAQGVTATVGGDYSHAHAMLGYIYSKLGTAWSEGEQTRIRQSFENMVAVNFNRGLMEMDGLNDIEDLRQAKAMAQCHAPLERSNTMTS 582

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: ETO78161.1 (hypothetical protein F444_06806 [Phytophthora parasitica P1976])

HSP 1 Score: 240.0 bits (611), Expect = 2.200e-59
Identity = 163/564 (28.90%), Postives = 275/564 (48.76%), Query Frame = 0

Query:   75 DEFTSALLPITR--LAIVTSGSVPTPLDTDSVNYLDTLG--SGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFL----------------------------------DQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD--SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            +EF ++ L   R  +A++TSG+   PLD ++  ++D        R  ACAE  L+  Y VIF++R+ SLRPF+R   K + +  A  D  ++    G V   MD  ++ +  ++   Y     R+L +SF+ + +YL L R   +A    +  A++ +AA L   ++P       +                                         + ++    VP+IIR  R+ WCP+AFLV  K +  +   +E AH  LE+ GV ++ GN     +R +L++TE++E  +  P + ++  +   A+   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR   D  +P+YELK ++  K   ARA++W+ V+E                                +P++  T      ++++ FSPAGNPETI  +WGD + GW E+E++        I L++ + ++ S ++  +   + LL  + + I  AW   EKT+  QS  N+M++A DR      G+   ++L+ R R
Sbjct:   78 EEFIASQLAHNRRGIALITSGATIVPLDPENDTFVDVAPQVQEQRGPACAEYLLQLDYAVIFVHREDSLRPFTRHFQKYI-QNGAFMDMFRMQD-NGLVLSGMDISQQLQFQKIAQLYTECSTRVLNLSFTSVQQYLMLTRITAKAMEVAKDRAIVVLAATLMDFYVPVDPSVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQSDEFSVNFVRVPNIIRKIRKDWCPKAFLVTCKHQLASGEDIEDAHADLEKWGVDVIAGN---HYSREILLITEQEEAIVTCPDDEDINDAFASAIADMHRSFRRKREILVRGKQLLLLSAKFSMLKEN-DVVNEDANGNKNVQFGLGVKIRADRRAPDAIAPVYELKHIFQNKSHCARAHVWEGVVE--------------------------------HPLSEPT-----RDVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGISLSSAINLVTSSVSGHYEPASQLLKFMWSKIGHAWSDGEKTRIRQSIQNMMAVALDRGFTEPAGISILEKLMRRPR 598

[Close]

BLAST of NO02G01400 vs. NCBI_GenBank
Match: XP_002999289.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69435.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 237.7 bits (605), Expect = 1.100e-58
Identity = 165/568 (29.05%), Postives = 277/568 (48.77%), Query Frame = 0

Query:   75 DEFTSALLPITR--LAIVTSGSVPTPLDTDSVNYLDTLG--SGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRMKKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSFSDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFLDQ---------------------------------GKE-----ALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLERHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNHKQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLRIKADRHKAD--SPIYELKAVYSTKGGSARANLWQRVIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVTPTTIAKGKGELLLTFSPAGNPETILSLWGDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLRTSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRR 599
            +EF ++ L   R  +A++TSG+   PLD ++  ++D        R  ACAE  L+ GY VIF++R+ SLRPF+R   +R  +  A  D  ++    G V   MD  ++ +  ++   Y     R+L +SF+ + +YL L R   +A    +   ++ +AA L   ++P      PSA+  +                                  GK+     ++    VP+IIR  R+ WCP+A+LV  K +  +   +E AH  LE+ GV ++ GN      R +L++TE++E  +  P + ++  +   A+   H+ F  ++E L   + LL LSAKF+ML+EN  VV+ DA G K V F +G++I+ADR   D  +P+YELK ++  K   ARA++W+ V+E                                +   PT       ++++ FSPAGNPETI  +WGD + GW E+E++        I  ++ + ++ S ++  +   + LL  + + I  AW   EKT+  QS  N+M++A DR      G+   ++L+ + R
Sbjct:   78 EEFVASQLAHNRRGIALITSGATIVPLDPENDTFVDAAPQVQEQRGPACAEYLLQLGYAVIFVHREDSLRPFTRHF-QRYIQNGAFMDMFRMQD-NGLVLSGMDLSQQLQFQKIAQLYTECSTRVLNLSFTSVQQYLMLTRITAQAMEVAKDRGIVVLAATLMDFYVP----VAPSASATEDAXXXXXXXXXXXXXXXXXXXXXXXXIKKLAKKIGKKKSDEFSVNFVRVPNIIRKIRKDWCPKAYLVTCKHQLASGEDIEDAHADLEKWGVDVIAGN---HHLREILLITEQEEAIVSCPDDEDINDAFASAIADMHRSFRRKREILVRGKQLLLLSAKFSMLKEN-DVVNEDADGNKNVQFGLGVKIRADRRAPDTIAPVYELKNIFQNKSHCARAHVWEGVVEH-------------------------------SSSEPTR------DVVVAFSPAGNPETIRDVWGDFWSGWAEDELQEFKTEMKGISFSSAINLVTSSVSGHYEPASQLLKFMWSKIGHAWSDGEKTRIRQSIQNMMAVALDRGFTEPAGISILEKLMRKPR 598

The following BLAST results are available for this feature:

BLAST of NO02G01400 vs. NCBI_GenBank

BLAST of NO02G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
GAX93342.1	3.400e-63	29.23	Hypothetical protein PINS_001252 [Pythium insidios...	[more]
OQR92318.1	7.500e-63	31.02	hypothetical protein ACHHYP_03818 [Achlya hypogyna...	[more]
POM71166.1	1.800e-61	29.23	DFP domain containing hypothetical protein [Phytop...	[more]
XP_008892378.1	3.500e-60	29.08	hypothetical protein PPTG_02829 [Phytophthora para...	[more]
ETL95906.1	3.500e-60	29.08	hypothetical protein L917_06421 [Phytophthora para...	[more]
XP_009518881.1	5.900e-60	28.65	hypothetical protein PHYSODRAFT_541206 [Phytophtho...	[more]
XP_008860898.1	1.700e-59	29.08	hypothetical protein H310_00058 [Aphanomyces invad...	[more]
XP_008860899.1	1.700e-59	29.08	hypothetical protein, variant [Aphanomyces invadan...	[more]
ETO78161.1	2.200e-59	28.90	hypothetical protein F444_06806 [Phytophthora para...	[more]
XP_002999289.1	1.100e-58	29.05	conserved hypothetical protein [Phytophthora infes...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR033	ncniR033	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK006758	NSK006758	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G01400.1	NO02G01400.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|522642	gene_719	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G01400.1	NO02G01400.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G01400 ID=NO02G01400|Name=NO02G01400|organism=Nannochloropsis oceanica|type=gene|length=2192bp
ATGTGGTTTAACCAGGCGGGAAGGAACCCCAAGCCGGATGATGATGCTTA
CATAGCCGCCTTTTTCGAGGACCTGGACGGGGCCAGCCCTGGAGACAGAG
GTAACTGCTCAACCACACTGGCGGCCTCATCCTCGGATGCCGCCACTCAA
ATCCGCACCTTTATCGAGCAGGAGGAGCAGGAGCAGTCACCAGGGTCTCA
AACCTTTCCCCCGATTTCCCACGATGAGTTCACCTCTGCCCTATTGCCCA
TCACGCGCCTGGCCATTGTCACGAGCGGTTCTGTTCCGACTCCCCTGGAC
ACGGATTCAGTCAATTACCTGGACACTTTGGGGTCGGGTAATCGTGCGGC
AGCATGTGCGGAAGAATTTTTGAGGAAAGGGTATCATGTCATATTCTTGT
ACCGAGACGGATCTTTACGCCCCTTTTCCCGAGTCCTGGCCAAGCGTATG
AAAAAAACACATGCGCTGACAGATCAAGTGCAATTAAATTCGAAGACGGG
CCGCGTGGAGCTGGTGATGGATGCGGATGAGGAAGCGCGCATGACCCAAG
TCCTCATGGCGTATGAGTCGGTCAAGCTGCGTCTACTCGAAGTGTCCTTT
TCTGATCTGTTTGAGTACTTATATCTTTTGCGAGAAGCCTGCCGCGCCGC
CGCGCCATTGCGCCATGGAGCCTTGCTCTTTATGGCTGCTGGATTGACGA
AAATGTTTATTCCTCGCCATGAGTTGACTCGACCTTCAGCTACTTTCCTT
GATCAGGGCAAGGAGGCCTTGAAGCTCTACCCCGTGCCACACATAATTCG
CGCCGCGCGGCAATCCTGGTGTCCTCAGGCTTTTCTCGTGGCCTTCAAAC
TGGAGAACGACACCCTAAGCCTGGTCGAAGGGGCGCATCGCTTGCTGGAG
AGGCATGGCGTGCATCTTGTGGTCGGCAACGTCGTCCGCGAGAGGAATCG
CCGCGTCCTAATCGTGACTGAGCGAGATGAAATTAAGCTGGTCTCTCCGC
ATGAAAACGAGTTAGAGCCTAGTATGGTCAAAGCCGTGGTGCGAAATCAC
AAGCAATTTGCCTTGGAGAAAGAAGCCCTCAAATCCAGTCGTTCCTTACT
CGGGCTCTCTGCGAAGTTTACCATGCTGAGGGAAAACAAGAGCGTTGTGG
ACACGGATGCATACGGGAGGAAGCAAGTTCCTTTTAAAGTCGGTTTGCGG
ATTAAGGCGGATCGACACAAGGCGGACTCGCCGATTTATGAGCTCAAGGC
CGTTTATTCCACCAAGGGAGGTTCTGCACGGGCCAATTTGTGGCAACGTG
TGATCGAGGAGGAGGGCGAGGGAGAGGAGGAGGGAGGGGAAGGAGAGAGC
AGAAAGAGTAGCAGCGACACGGCAACCCCTACTTCTTCTACTGCTGCTTT
AGCCAATCCCGTGACACCCACGACCATCGCCAAAGGAAAAGGAGAGCTTC
TTCTAACCTTCTCGCCCGCAGgtaaaatccaaagcctgattacagctttt
ctcttccttcttcctcttcttcacgactgcatgcaccgctcaccgtcccc
ccccctcccctcctcgcccacactcaaacagGCAACCCCGAAACCATCCT
CAGCCTGTGGGGCGACACTTACAAAGGCTGGCTCGAAGAAGAAGTCAAAC
ACCTACTTGCTGCCGCCAGTCATATTCCTCTCACCACCTACTTGAAGATC
CTCGCCTCACCGTTGACTGCTGATTTCACCGACCTAGCGGACCTCCTGGC
ACAACTCCGCACCTCAATCGCGAGTGCGTGGAAGAAGCGGGAAAAGACGC
AGTTCGTCCAGAGTTATAACAATTTGATGAGTCTGGCATTCGATCGGGCC
TTGATGCCTTTGGAAGGATTGATGGACGCTCAGGAGTTGCTGGACCGACG
GAGGGAGATGGAGATGGAGGAGGAGTGGGGGAGAGGGGGGTCAGTGTCTT
CCTGCTCGACCTCCTCCTCCCTGTCAGTTCGATTTGGCCGTTCCCCTAGA
GGATCCATTGGTGTTGCGGGAACGGTTGGGGAAGGAGGGGAAGTGAAGGT
GTTGAAGCTGTTCAAGCCTATTTTTCGTGGTCTTTCTCTGGGCAGCATGT
TGCAGGAGAACAAGCAGCGTTTCCCGCGACGTAGAAGCACCCTGACGACC
GCAGGAGGAAGAGGGGGGGGCGGGAAAGAGGAAGTAGACTGA

protein sequence of NO02G01400.1

>NO02G01400.1-protein ID=NO02G01400.1-protein|Name=NO02G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=694bp
MWFNQAGRNPKPDDDAYIAAFFEDLDGASPGDRGNCSTTLAASSSDAATQ
IRTFIEQEEQEQSPGSQTFPPISHDEFTSALLPITRLAIVTSGSVPTPLD
TDSVNYLDTLGSGNRAAACAEEFLRKGYHVIFLYRDGSLRPFSRVLAKRM
KKTHALTDQVQLNSKTGRVELVMDADEEARMTQVLMAYESVKLRLLEVSF
SDLFEYLYLLREACRAAAPLRHGALLFMAAGLTKMFIPRHELTRPSATFL
DQGKEALKLYPVPHIIRAARQSWCPQAFLVAFKLENDTLSLVEGAHRLLE
RHGVHLVVGNVVRERNRRVLIVTERDEIKLVSPHENELEPSMVKAVVRNH
KQFALEKEALKSSRSLLGLSAKFTMLRENKSVVDTDAYGRKQVPFKVGLR
IKADRHKADSPIYELKAVYSTKGGSARANLWQRVIEEEGEGEEEGGEGES
RKSSSDTATPTSSTAALANPVTPTTIAKGKGELLLTFSPAGNPETILSLW
GDTYKGWLEEEVKHLLAAASHIPLTTYLKILASPLTADFTDLADLLAQLR
TSIASAWKKREKTQFVQSYNNLMSLAFDRALMPLEGLMDAQELLDRRREM
EMEEEWGRGGSVSSCSTSSSLSVRFGRSPRGSIGVAGTVGEGGEVKVLKL
FKPIFRGLSLGSMLQENKQRFPRRRSTLTTAGGRGGGGKEEVD*

Synonyms

Publications