NO02G01280, NO02G01280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01280 vs. NCBI_GenBank
Match: OQR89631.1 (syntaxin [Thraustotheca clavata]) HSP 1 Score: 224.9 bits (572), Expect = 3.500e-55 Identity = 133/291 (45.70%), Postives = 177/291 (60.82%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARK 292 M+DRL EL + S V IDM+ ++ +P+FM +FF DVE + D+N I A R+ ++ +A +AT +E +S EL VI + + ++D S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +KNKV+RQVQIVKPDAS +EI+ V +S + AIL+G+ ESI+ VY N DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQIE+QVK A+NY+E G +V AI+S K RK Sbjct: 1 MHDRLAELTGR---------SSDVTIDMSET-----------SSEIARPKFMEKFFVDVEDMQADLNKIVLATDRICELNHQALIATAAGEEQTISQELCLVIDGTNKIAAHGKGLLELIKKESAEKKKDKNVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRS-ADPGAIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIESGNKEVTKAIQSQKSLRK 270
BLAST of NO02G01280 vs. NCBI_GenBank
Match: GAX24245.1 (syntaxin 1B/2/3 [Fistulifera solaris]) HSP 1 Score: 224.9 bits (572), Expect = 3.500e-55 Identity = 124/248 (50.00%), Postives = 162/248 (65.32%), Query Frame = 0 Query: 48 QPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILK-GANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQC 295 Q + M+ FF +VE+ K DI AI +A + + I+ A AT+ +E +LS +L ++ T KL+++ + S LR+R+NL NTLTRKF+D MK YQ AQ KYK IK KV RQVQIVKPDA+ E+I+AV +S GG D + + IL G N+ +++ Y+ VA KYQDVL LE S+AELHQMFLDFALL EQQGELLDQIE+QVK A +YVE+ + V AIE +K RK QC Sbjct: 34 QAKHMDHFFREVESIKRDIEAITKATKSIGNINDRALQATSTEEENELSRKLRPLVDQTNKQAKRTKTLLGLLKEETQKLQENKQIKQSDLRVRENLCNTLTRKFIDEMKAYQAAQQKYKTDIKKKVARQVQIVKPDATDEDIDAVMRSEGGRDALYREQILAGGVNDQVKTTYEKVAGKYQDVLALEHSVAELHQMFLDFALLTEQQGELLDQIEFQVKQAGDYVEEANVDVYEAIEYQRKIRKKQC 281
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_009831452.1 (hypothetical protein H257_07577 [Aphanomyces astaci] >ETV78733.1 hypothetical protein H257_07577 [Aphanomyces astaci]) HSP 1 Score: 224.2 bits (570), Expect = 5.900e-55 Identity = 136/291 (46.74%), Postives = 177/291 (60.82%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARK 292 M+DRL+EL K G V ID+ AA T A +P+FM +FF DVE + D+ I A R+ ++ +A LAT +E +S EL VI T ++D S++RIRDN++ TLTRKF+D MKDYQ AQ ++KA +KNKV+RQVQIVKPDAS EI+ V +S + AIL+G+N+SI+ VY N DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQIE+QVK A+NY++ G +V A++S K RK Sbjct: 1 MHDRLSELTGKAAAG-------DVAIDV--------AAENTNVA---RPKFMEKFFVDVEEMQADLGKITVATDRIAELNHQALLATATGEEQIISQELCLVIDTTNKIAARAKGLLELIKKETADKKKDKNAPASEMRIRDNMSTTLTRKFMDTMKDYQKAQQRFKADMKNKVKRQVQIVKPDASEHEIDMVMRS-ADPGAIYRSAILQGSNDSIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKTASNYIDAGNKEVTKALKSQKSMRK 272
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_009517017.1 (hypothetical protein PHYSODRAFT_294753 [Phytophthora sojae] >EGZ29742.1 hypothetical protein PHYSODRAFT_294753 [Phytophthora sojae]) HSP 1 Score: 223.0 bits (567), Expect = 1.300e-54 Identity = 133/297 (44.78%), Postives = 181/297 (60.94%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M DRL E++ K + P+D V ID+ G +P+FM +FF DVE + D+ I A ++++ ++ +A LAT+ +E +S +L VI+ + + +++ S++RIRDN+ TLT+KF+D MKDYQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI++QV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 1 MLDRLAEIKGK------APPADQVAIDVE-------------PRGVVRPKFMEQFFKDVEEMQMDLANISLASQQISELNGKAILATSNTEEQAISTQLGFVIETTNKLAAHAKGLLEMLKKESAERKKEKGTPLSEIRIRDNMCATLTKKFMDSMKDYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDHQVRTAANYVEQGNQEVQKAIKYQKAHRKKMCCLL 278
BLAST of NO02G01280 vs. NCBI_GenBank
Match: GAY05030.1 (syntaxin, putative [Pythium insidiosum]) HSP 1 Score: 221.1 bits (562), Expect = 5.000e-54 Identity = 128/262 (48.85%), Postives = 168/262 (64.12%), Query Frame = 0 Query: 37 AAAATGAAGS-TQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 AA + G +P+FM +FF DVE + D+ I +++ ++Q A LAT+ +E +S+EL VI+ + ++D S++RIRDN+ TLT+KF+D MKDYQ AQ KYK +K KV+RQVQIVKPDAS EI+AV +S + AIL+G ++IR VY NV DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQIE+QV+ AANYVE G V A++S K ARK +CC+L Sbjct: 18 AAVSVGRPNEVVRPKFMEQFFKDVEDMQSDLANINLGTQKIAELNQRAVLATSNTEEQAISNELTIVIETSNRHATHAKGILEALKKESADRKKDKSTPVSEIRIRDNMCATLTKKFMDCMKDYQKAQQKYKNDMKAKVKRQVQIVKPDASEAEIDAVMRS-PDPGSIYKSAILQGPADAIRDVYLNVQDKYQDVLRLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVRTAANYVEQGNQXVVKALKSQKSARKKKCCIL 278
BLAST of NO02G01280 vs. NCBI_GenBank
Match: ETO78001.1 (hypothetical protein F444_06889 [Phytophthora parasitica P1976] >ETP19072.1 hypothetical protein F441_06823 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 220.7 bits (561), Expect = 6.500e-54 Identity = 124/253 (49.01%), Postives = 163/253 (64.43%), Query Frame = 0 Query: 45 GSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 G +P+FM FF DVE + D+ I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 5 GVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 257
BLAST of NO02G01280 vs. NCBI_GenBank
Match: ETP47017.1 (hypothetical protein F442_06855 [Phytophthora parasitica P10297]) HSP 1 Score: 220.7 bits (561), Expect = 6.500e-54 Identity = 124/253 (49.01%), Postives = 163/253 (64.43%), Query Frame = 0 Query: 45 GSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 G +P+FM FF DVE + D+ I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 5 GVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGILERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 257
BLAST of NO02G01280 vs. NCBI_GenBank
Match: OWZ19717.1 (Syntaxin [Phytophthora megakarya]) HSP 1 Score: 219.5 bits (558), Expect = 1.500e-53 Identity = 126/263 (47.91%), Postives = 166/263 (63.12%), Query Frame = 0 Query: 35 PAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 PA A G +P+FM FF DVE + + I A ++++ ++ +A LAT+ +E +S EL VI+ + + +++ S++RIRDN+ TLT+KF+D MKDYQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 14 PADQVAINVRGVVRPKFMEAFFKDVEDMQMGLANISLASQQISELNGKAILATSNVEEQAISTELGLVIETTNKLAGHAKGVLELLKKESAERKREKGTPLSEIRIRDNMCATLTKKFMDTMKDYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRSAANYVEQGNQEVQKAIKYQKAHRKKMCCLL 276
BLAST of NO02G01280 vs. NCBI_GenBank
Match: POM58613.1 (Sulfate Permease (SulP) Family [Phytophthora palmivora var. palmivora]) HSP 1 Score: 219.5 bits (558), Expect = 1.500e-53 Identity = 124/253 (49.01%), Postives = 164/253 (64.82%), Query Frame = 0 Query: 45 GSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 G +P+FM FF DVE + D+ I A ++++ ++ +A LAT+ +E +S EL VI+ + + +++ S++RIRDN+ TLT+KF+D MKDYQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 834 GVVRPKFMEAFFKDVEDMQMDLANISLASQQISELNGKAILATSNVEEQAISTELGFVIETTNKLAAHAKGLLEMLKKESAERKKEKGTPLSEIRIRDNMCATLTKKFMDAMKDYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRSAANYVEQGNQEVQKAIKYQKAHRKKMCCLL 1086
BLAST of NO02G01280 vs. NCBI_GenBank
Match: OEU14036.1 (t-SNARE [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 218.8 bits (556), Expect = 2.500e-53 Identity = 118/247 (47.77%), Postives = 163/247 (65.99%), Query Frame = 0 Query: 52 MNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILK-GANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M+ FF++V+ DI AI +A + +++I++++ +TT +E KLS +L +I T KL+++ + N S +R+R+N+ TLT+KF+D MK YQ +Q KYK IK KV+RQVQ++KPDA+ EEI+ V KS GG D + Q+IL G N+ I++ Y VA KYQDVLTLE S+AELHQMFLDFALL EQQGELLDQIE+ V A +YVE+ ++ AIE K RK QC +L Sbjct: 1 MSSFFSEVDRVNADIKAIAKASKEIDSINEQSMRSTTTAEEQKLSKKLGPLIGTTNKSAKRTKDVLGLLKQETDKLKEEGKLNASNVRVRENMNTTLTKKFIDEMKIYQQSQQKYKTDIKKKVKRQVQVIKPDATDEEIDDVMKSEGGRDALYKQSILAGGVNDQIKTTYAKVAGKYQDVLTLEQSVAELHQMFLDFALLTEQQGELLDQIEFNVTQATDYVEEANVETHTAIEYQKSIRKKQCWIL 247 The following BLAST results are available for this feature:
BLAST of NO02G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01280 ID=NO02G01280|Name=NO02G01280|organism=Nannochloropsis oceanica|type=gene|length=1325bpback to top protein sequence of NO02G01280.1 >NO02G01280.1-protein ID=NO02G01280.1-protein|Name=NO02G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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