NO02G01060, NO02G01060 (gene) Nannochloropsis oceanica

Overview
NameNO02G01060
Unique NameNO02G01060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5767
Alignment locationchr2:329160..334926 -

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Properties
Property NameValue
DescriptionSelenocysteine-specific elongation factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:329160..334926 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel
IPR027417P-loop_NTPase
IPR000795TF_GTP-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Homology
BLAST of NO02G01060 vs. NCBI_GenBank
Match: EWM30596.1 (selenocysteine-specific elongation factor [Nannochloropsis gaditana])

HSP 1 Score: 720.3 bits (1858), Expect = 8.600e-204
Identity = 487/997 (48.85%), Postives = 577/997 (57.87%), Query Frame = 0
Query:   80 PSAVASPSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLP---TLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRER-------------XXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXR--FQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQRRREG----GMGLLMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVSGDSYPEAHRXXXXXXXXXAFHPDQPLEGVDISALETTTAEMSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYNTFSLATSSLAS---PLPAVRDMELRFGKVDAVRAGDLVIVKGFFSMEEDIRKYIGLKVVPTERGKEGGEEEGRRGPEGYVVGPFGKGGKAKVQFSSPFDGGVGTSLTLYVMTTARAGVDEGEGEGE 1052
            PS  + P    +LP NINVGVMGHVDSGKTSLVR+LS HLSTA+LDKHPQSQERGITLDLGFSSFLLP     PS   S   +  Q+TLVDCPGH SLIRTIIGGAQIIDLVLLLVDAT+G+QAQTVECV+LAE+T P+LV+ALNK DLFP +ERE KVR  TA+LR+AL  SRF+ API+PVAA++GGE +VG SSS                     K  +G                                                      +LGL+ L +AL++ I LP RS +GPL++AVDHCFP+KGQGTVLTGTVL G+VSV D++ELP LG TR+VKSLQ FH  V  A+ GDRVGLC+T+LDAK +ERG  CTPGSV    +A+G VR+IRAFRGRVK+G  +HVSVGHGTVMAT+TFFGAKE+ R R++                         W+ P  PF W++DYLYQ EMAG  E                     R  +Q QY L +F++PVLC +  L+IGSRLD D                                           GGCRLAF GTLLE L EEDL    IYKPK+REGSIYRLGE   +     PSL R+REVTAQGFFKKET+L PF+GMEVET  GQVGRLESGFG+GGKVR+RFD   +GG  G  VGDKL+++FRR+VFD  K+MVQRR+ G    G+ LL+G                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX   V                          LEGVD+SALE + + M L                                     ++AT ++A+    L A  D E R G ++ VRA  LVIV G F+MEED+R Y  L+V     G     EEG+   EGYVVGPFGKGGKAKVQF     G  G  +TL   +    G + G+ E E
Sbjct:   69 PSLASQP----ALPFNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVG-SSSRGVXXXXXXXXXXXXXXXXXRKENSG------------------------------------------TRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIG-----------HRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFD--EKGGLAGGHVGDKLFLRFRRYVFDQEKRMVQRRQAGRDMSGLSLLLGEDTEPEVEVEGDRAEGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRV--------------------------LEGVDLSALEDSASHMYLGSQHPAARGNALRDGPRDE------------------AVATEAVAAVPVQLGAEGDAEWRMGHIEKVRADGLVIVTGLFTMEEDVRNYKDLRV-----GLR--TEEGQEAVEGYVVGPFGKGGKAKVQFPRECHGLEGAWVTL-SFSLMPQGEETGKHEDE 953          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_009037925.1 (putative selenocysteine-specific elongation factor, selB [Aureococcus anophagefferens] >EGB07292.1 putative selenocysteine-specific elongation factor, selB [Aureococcus anophagefferens])

HSP 1 Score: 429.9 bits (1104), Expect = 2.300e-116
Identity = 271/702 (38.60%), Postives = 373/702 (53.13%), Query Frame = 0
Query:   93 PLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAF-----QITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAG--RKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFL-IYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787
            PLNINVG+MGHVDSGKTSLV++LS  LSTAALDK P+S+ RG+TLDLGFSSF +P LP  L +     F     Q TLVDCPGHASLIRTIIGG+QIID+++L++D  +G+Q QT EC+++ EITT  L+I LNK D+ PE ER+  V   T  +R  L  S+F +A I+  AA VGGEK   A+              + TA                                                                +LGL+ L + LR   R+PSR   GP + A+DHCFPI+GQGTV+TGT L G  +VNDI+ELP +G  +KVKS+Q+F   VK    GDR GLC++ LDA  IERG+   PGSV   + A+ +VRK+R FRG   T  + HV++GH T +AT  FFGA EL    +              + PP  FD  ++Y++QE++A   RK+G  XXXX                 +Q+ LL+F++ V C++++L+IGS L+AD                                          A  CR+AFHG L+E +  +   + + +YK K +EG + +LG+P       +      ++V  +  FKKET +  FVGM+++   G++GR+ S FGK GK ++ F      G   +K   KLY+ F+++VF P K M Q
Sbjct:   12 PLNINVGIMGHVDSGKTSLVKALSTTLSTAALDKAPESKARGMTLDLGFSSFSVP-LPDQLRAGVAGRFDEANLQFTLVDCPGHASLIRTIIGGSQIIDMMVLVMDVNKGIQTQTAECLVIGEITTSELIIVLNKVDVIPEAERDATVAKTTKRIRLQLASSKFANATIVTCAAAVGGEKRAAAA--------------LGTA---------------------------------------------------------------PSLGLEGLVETLRRRARMPSRDVEGPFFFAIDHCFPIRGQGTVVTGTALRGACAVNDIVELPEVGLEKKVKSMQMFRKPVKKIVCGDRAGLCLSQLDAAAIERGIVAAPGSVPGINSALALVRKVRFFRGPCDTDRKFHVTLGHTTTLATAYFFGAAELAARPKP-------------AEPPTAFDSSREYVFQEQLAASKRKKGADXXXXDGPGPGSDLNDE----PLQWCLLKFETRVRCQLDALVIGSNLEADA----------------------------------------LADKCRIAFHGKLVERVDGDAFATKVKLYKLKRKEGLVAKLGDPCVD----VTGARVVKDVVGKDLFKKETNMAAFVGMKLQAATGEMGRVASAFGKSGKFKVDFP-----GGTLVKPNGKLYLVFKKYVFSPSKAMHQ 569          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_002176693.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51156.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 425.6 bits (1093), Expect = 4.400e-115
Identity = 272/707 (38.47%), Postives = 376/707 (53.18%), Query Frame = 0
Query:   79 LPSAVASPSLP-TSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSL-PSIPGEA-FQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAK-----ELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRF 777
            +PS      LP     LN+N+GV+GHVDSGKTSLV++LS  LSTAALDK  QS++RG+TLDLGFS F L  +PS L  S P +   QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LAE+T+P LV+ALNK D FP  ER+  +    A +R  L+ +RF +API+ VAA VGGEK                   VA AS++  K                                                         +   ++ L Q L++ +  P R+  G  Y +VDHCF I+G+GTVLTGTVL+G  SVND++E P LG  RK+KS+Q+F   V+  +QGDR G+CV+NLDAKL+ERG+A TPG+V+    AI +VRK+  + G + +G++ H+SVGH T+MATVTF+        + +  +             +  +P + F +++++++Q+++    +G                       + + LL F+ PV C ++SL+IGSRLD                                            A  CRLAF G L++ V   +D+    +Y PK R G+I RLG+P          L RY EV     FKKET +  F GM+V+TE  ++G ++S FG  GK R+ F  G E      K G+ L ++F+RF
Sbjct:    1 MPSTGPDDRLPDQETVLNVNLGVLGHVDSGKTSLVKALSTLLSTAALDKSKQSRQRGMTLDLGFSCFFL-DMPSHLQASYPDKKNLQITLVDCPGHASLIRTIIGGAQIIDMVLLVVDAVKGWQAQTTECLVLAELTSPYLVVALNKADQFPPPERDQLLEQAAAKIRDRLKATRFANAPIVGVAACVGGEK-------------------VAAASEDMSK----------------------------------------------------LEVRNETYNMETLVQTLQDKLPPPKRTPEGSFYFSVDHCFSIRGRGTVLTGTVLNGAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRIQQGDRAGVCVSNLDAKLLERGIAATPGAVQLLKGAIALVRKVPYYVGTLHSGSKFHISVGHTTIMATVTFWDLSVVNPVDTKPSKRYVGSSSLGGDADMAGLPRMTFSFEEEFIHQDDLLESLDGQESL-------------------LHWALLDFQIPVHCPMDSLVIGSRLDT------------------------------------VDNSTGSASACRLAFSGRLMQSVDPGKDISKLRLYTPKERRGTISRLGDPHKRTDD--DKLVRY-EVFGSDLFKKETNMKAFFGMKVQTERNEIGEIKSSFGTSGKYRVFFPAGTEA-----KEGEPLILRFKRF 572          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: CBN75652.1 (SelB, translation elongation factor specific to Sec-tRNA [Ectocarpus siliculosus])

HSP 1 Score: 425.2 bits (1092), Expect = 5.700e-115
Identity = 275/728 (37.77%), Postives = 372/728 (51.10%), Query Frame = 0
Query:   94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPS---LVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELE--------------RMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKE--------EDLKSFL----------IYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787
            LNINVG++GHVDSGKTSLV++LS  LSTA+LDK+PQS+ERGITLDLGFS+F + +LP  LP       Q TLVDCPGHASLIRTIIGGAQI+D++LL+VDAT+G+QAQT ECV++ E    S   +++ LNK DL PE+ER+ ++R     +   L G++   A  +  AA VGGEK+  A+S+PPA  R          S +G    TG    L+GN                                               +G+D +   L    R+PSR A+ PLY A DHCF ++GQGT+LTG      V VN ++ELP L   +KVKS+Q+F   V  AR GDRVG+CV +LDAKL+ERGV  TPGSVR    AI +VRK+ AF G+  +G   HVS+GH T MAT TFFGA EL+              +  E            +  +  LPF  +  ++ Q  + G                        R  +QY  L F +PV+   +S+++GSRLD+ ++                                           CR+AFHG L+ +  +         D ++ L          ++  K + G ++R+     +    +       EV  +  FKKET + PFVGM + TE G VG LES FGK G+ + RF  G       +KVGDKL +KFR++  DP K+M Q
Sbjct:   11 LNINVGILGHVDSGKTSLVKALSTVLSTASLDKNPQSRERGITLDLGFSAFTV-SLPEHLPQDQYSHLQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGIQAQTTECVVIGEAVMSSGADVIVVLNKVDLIPEQERKARLRQAETEIAAQLAGTKLSSASFVSCAAAVGGEKT--AASTPPAGSR----------SSKGRAKKTG---VLSGNVGSAAGATSHEKGSKDVRPGGGDDAAEPLSGVTPPRPPSSCSEETSAMGIDTVAGELSRRARVPSRRASAPLYFAFDHCFSVRGQGTILTGXXXXXXVKVNQLVELPSLRLQKKVKSMQMFRKPVSIARAGDRVGMCVASLDAKLMERGVVTTPGSVRPISAAIALVRKVPAFTGQCLSGAYCHVSLGHSTAMATATFFGASELKNGLLGLFEHSADGLKALEALRDAGQGQDLSLNEIASLPFPSEAAFVQQTHLCG------AGSENSIAGADDEVCVDERPLLQYCHLTFHTPVITPPSSVVLGSRLDSTSSSPNKTEAAHPTGETIKGLAAVQEH-------------------CRIAFHGRLVSMSADVVGTRKGPGDARAALDFGTQAGQLKLFTEKRKTGVVFRVTPNDQTGGGAV-------EVFGKDLFKKETNMPPFVGMLLLTEGGSVGHLESTFGKAGRFKARFPAGTL-----VKVGDKLILKFRKYFRDPSKRMHQ 685          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GBG26915.1 (Selenocysteine-specific elongation factor [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 422.5 bits (1085), Expect = 3.700e-114
Identity = 260/691 (37.63%), Postives = 363/691 (52.53%), Query Frame = 0
Query:   94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG--PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTL----LEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVF 779
            +N+NVGV+GHVDSGKTSLVR+LS  LSTAALDKHPQS+ERGITLDLGFS+F +   P  L     +  Q TLVDCPGHASLIRTIIGGAQIID ++L+VD T+G+Q QT EC+++ EI T  L++ LNK DL PE  R   V  VT ++ +AL  +RF+ +PI  ++AIVGG+   G      AA       P  T  ++G    +G                                                     +  GL+ L Q +R    +P R  A   PLY A+DHCFPIKGQGTV+TGT+L G V+V D++E+P LG  RKVKS+Q+F   V+ A +GDRV LC  NL+A  +ERG   TPGSV     AI ++RK+R F    K+G+++HV+VGH T +A VTFFG+ EL+ +  +             ++P L FD ++++LY EE+ G  +                        +Q+ LL F  PV+C+  + +IGSRLD                                               CR+AF+G +     +   EE+L    +Y+ K R G++ R+ +           + R R+V A+  F K+T +  F+ + VET+ G  GR++S FGK GK  + F  G +G    +K GD+L ++ +R +F
Sbjct:    8 VNVNVGVLGHVDSGKTSLVRALSTMLSTAALDKHPQSKERGITLDLGFSAFTVEA-PEQLADTGVKQVQYTLVDCPGHASLIRTIIGGAQIIDRMILVVDVTKGIQTQTAECLVIGEILTDDLIVVLNKIDLLPEATRTASVERVTKAIEQALSSTRFKGSPIACISAIVGGDGKAGVGEGSAAAPPQ---PPATTVKQQGQTGSSG----------------------------------------------------IETQGLEDLVQLIRRTTVMPERGDASKEPLYFAIDHCFPIKGQGTVVTGTMLGGTVNVGDMVEIPQLGLERKVKSMQMFRKPVEHAAKGDRVALCFANLNADALERGTITTPGSVPSTSAAIVLLRKVRFFPLACKSGSKLHVTVGHATTVAKVTFFGSAELKEVAAQHLGK---------NLPMLAFDHEQEFLYDEELRGGGKAKGGPF------------------LQWALLNFDQPVICQAGATVIGSRLDMSV----------------------------------------ETKSCRIAFYGRVASQYTKTPTEEELARLRVYRFKERHGAVDRIVDKKPD------EVGRVRDVVARSMFSKDTDMSKFINLTVETDAGATGRIQSAFGKTGKFNVHF--GGDGAV--VKKGDRLTLRHKRMIF 565          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_002290286.1 (selenocysteine-specific elongation factor SelB, partial [Thalassiosira pseudonana CCMP1335] >EED92038.1 selenocysteine-specific elongation factor SelB, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 419.9 bits (1078), Expect = 2.400e-113
Identity = 271/710 (38.17%), Postives = 366/710 (51.55%), Query Frame = 0
Query:   94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSL---PSIPG----------EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSR-SAAGP--LYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLK-EEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787
            LN+NVGV+GHVD+GKTSLV++LS+ LSTA+LDK  QS+ RGITLDLGFS+FLLP LP  L    S P           +  Q+TLVDCPGHASLIRTIIGGAQIID+VLL+VDAT+G+Q QT EC+++AE+TT +L++ LNK DLFPE ERE ++R     +R +L G++FE+A ++ ++A VGGEK                                  VA + G                                                  +  L   L+  IR PSR S   P   + AVDHCFPIKGQGTVLTGT L G    ND++E P L   +K+K LQ+F       +QGDR G+CV+N DAKL+ERG+  +PG+V+    AI VVRK+R F+G + +G + HVSVGH TVMATVTF+GA+                   +  +P L FDW++D+L+Q++                              + +  L F +PV C ++SL+IGSRLD +                                          A  CRLAF G L+E  + + D      Y  K + G++ RLG+P          L RY EV     FKKET +  FVG+ +ET+ G +G ++S FG  GK R+ F  G +     ++ GD LY++F+R+  DP K + Q
Sbjct:    3 LNLNVGVLGHVDTGKTSLVKTLSSVLSTASLDKSKQSRARGITLDLGFSAFLLP-LPEHLRREASNPQQEQMQLQQKYDLLQVTLVDCPGHASLIRTIIGGAQIIDMVLLVVDATKGIQTQTAECLVIAEMTTRNLIVVLNKVDLFPENEREERIRMAEKKMRMSLRGTKFENAMMVGISACVGGEK----------------------------------VAAIGGTN-----------------------------------------------NIHGLLNILQSQIRAPSRDSKPSPDRFHFAVDHCFPIKGQGTVLTGTCLSGSARPNDMVEFPTLATQKKIKGLQMFRRKANIIQQGDRAGICVSNFDAKLMERGIIASPGTVKLIRGAIAVVRKVRFFKGGLHSGAKFHVSVGHTTVMATVTFWGAR---------------GSADLAGLPRLKFDWNQDFLHQDDYLEVLPSVDNNSNNNDESDKAKEKGLP--PLHWARLEFLTPVYCPIDSLVIGSRLDTEV----------------------------------------NANTCRLAFSGRLVERYEAKTDHNRLKSYTKKEKIGTVCRLGDPFRRSDD--NKLVRY-EVFGTDLFKKETNMSQFVGLLMETDRGDIGSIQSSFGTSGKFRVNFPAGTD-----IREGDPLYLRFKRYANDPKKAIHQ 565          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GAX16209.1 (hypothetical protein FisN_3Hh309 [Fistulifera solaris])

HSP 1 Score: 419.1 bits (1076), Expect = 4.100e-113
Identity = 275/713 (38.57%), Postives = 372/713 (52.17%), Query Frame = 0
Query:   94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPS-IPG-EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG-----PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAF-RGRVKTGTEVHVSVGHGTVMATVTFFGAKEL-ERMRERXXXXXXXXXXXVW--------SVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLD--ADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787
            LN+NVGV+GHVDSGKTSLV++LS  LSTAALDK  +S+ERG+TLDLGFS F L  LP  L    P  +  QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LA++T+P L++ALNK D+F   ERE ++    + +R+ L G+RF  AP++ VAA VGGEK                    A A+ E  KS                                                        +   +D L   L+  +  P RS        P Y +VDHCFPI+G+GTVLTGTVL G  +VND IE P LG  RK+KS+Q+F   V+  +QGDR G+CV+NLDAKL+ERG+   PG+V     AI +VRK+  +  G++   ++ H+SVGH TVMAT+TF+GA+EL  +  E             W         +P +PFD+ +D+++QE +    +                        + + LL F++PV C  +SL+IGSRLD   DT G                                       A  CRLAF G L+E V     +    +Y  K + G + +LG+P          +  Y EV     FKKET +  F+GM++ETE G +G ++S +G  GK R+ F  G E     ++ G+ LY++F+RF+ DP K M Q
Sbjct:   17 LNVNVGVLGHVDSGKTSLVKALSTLLSTAALDKSKESRERGMTLDLGFSCFFL-DLPEHLQQHFPDKKKLQITLVDCPGHASLIRTIIGGAQIIDMVLLIVDAVKGWQAQTTECLVLAQLTSPHLLVALNKADMFEPNEREKQLEAAKSKVRQRLIGTRFADAPMVGVAACVGGEK--------------------AAANAEETKS----------------------------------------------------SVLHETYQMDLLVDLLKAKLPPPRRSVTNEAKEQPFYFSVDHCFPIRGRGTVLTGTVLSGFAAVNDGIEFPSLGMDRKIKSIQMFKRQVQHIQQGDRAGICVSNLDAKLLERGIVAAPGAVPLWKGAIALVRKVPYYTSGKLMCNSKFHISVGHTTVMATLTFWGARELAHQAAEAKKDASSNKLMSSWLGGDADLAGLPKIPFDFQQDFVFQESLLEALD--------------TSPGNPQETLLHWALLDFQTPVYCPAHSLVIGSRLDVAVDTDG--------------------------------------GASSCRLAFSGRLIERVEPSTAMTQIRLYTEKQKVGVVSKLGDPHKRFDD--QKVVCY-EVFGDDLFKKETNMKLFIGMKMETEQGDIGEIKSSYGTSGKFRVYFPGGTE-----VQEGEPLYLRFKRFMHDPTKSMQQ 596          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GAX10118.1 (hypothetical protein FisN_3Lh309 [Fistulifera solaris])

HSP 1 Score: 418.3 bits (1074), Expect = 7.000e-113
Identity = 275/713 (38.57%), Postives = 373/713 (52.31%), Query Frame = 0
Query:   94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPS-IPG-EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG-----PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAF-RGRVKTGTEVHVSVGHGTVMATVTFFGAKEL-ERMRERXXXXXXXXXXXVW--------SVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLD--ADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787
            LN+NVGV+GHVDSGKTSLV++LS  LSTAALDK  +S+ERG+TLDLGFS F L  LP  L    P  +  QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LA++T+P L++ALNK D+F   ERE ++    + +RK L+G+RF  AP+I VAA VGGEK         AA  AE  +  A                                                                 +   +D L   L+  +  P RS        P Y +VDHCFPI+G+GTVLTGTVL G  +VND IE P LG  RK+KS+Q+F   V+  +QGDR G+CV+NLDAKL+ERG+   PG+V     AI +VRK+  +  G++   ++ HVSVGH TVMAT+TF+GA+EL  +  E             W         +P +PFD+ +D+++Q+ +    +                        + + LL F++PV C  +SL+IGSRLD   D+ G                                       A  CRLAF G L+E V     +    +Y  K + G + +LG+P          +  Y E+     FKKET +  F+GM++ETE G +G ++S +G  GK R+ F  G E     ++ G+ LY++F+RF+ DP K M Q
Sbjct:   17 LNVNVGVLGHVDSGKTSLVKALSTLLSTAALDKSKESRERGMTLDLGFSCFFL-DLPEHLQKHFPDKKKLQITLVDCPGHASLIRTIIGGAQIIDMVLLIVDAVKGWQAQTTECLVLAQLTSPHLLVALNKADMFEPNEREKQLEAAKSKVRKRLKGTRFADAPMIGVAACVGGEK---------AAANAEETKTSAV---------------------------------------------------------------HETYQMDLLVDLLKAKLPPPRRSVTNEAKEQPFYFSVDHCFPIRGRGTVLTGTVLSGFAAVNDGIEFPSLGMDRKIKSIQMFKRQVQHIQQGDRAGICVSNLDAKLLERGIVAAPGAVPLWKGAIALVRKVPYYTSGKLMCNSKFHVSVGHTTVMATLTFWGARELAHQAAEAKNDASSNKLMSSWLGGDADLAGLPKIPFDFQQDFVFQDSLLETLD--------------IAPGDPQETLLHWALLDFQTPVYCPAHSLVIGSRLDVAVDSDG-------------------------------------GTASSCRLAFSGRLIERVEPSTAMTQIRLYTEKQKVGVVSKLGDPHKRFDD--QKVVCY-EIFGADLFKKETNMKLFIGMKMETEQGDIGEIKSSYGTSGKFRLYFPGGTE-----VQEGEPLYLRFKRFMHDPTKSMQQ 597          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_004346488.1 (selenocysteinespecific elongation factor, putative [Acanthamoeba castellanii str. Neff] >ELR21543.1 selenocysteinespecific elongation factor, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 416.4 bits (1069), Expect = 2.700e-112
Identity = 272/701 (38.80%), Postives = 351/701 (50.07%), Query Frame = 0
Query:   86 PSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEM-AGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMV 786
            P+ P++  LNIN+G++GHVDSGKTSL ++LS   STAA DK+PQS++RGITLDLGFS+F     P  L     +  Q TLVDCPGHASLIRTIIGGAQI+DL LL++DA +G+Q QT EC+++AE+TT  L++ LNKTD+ P   R   V+     +R+ L+G++F  AP++ VAA  G E+      +PP                                                                               LG+  L   LRE   LP RSA GP  L+VDHCFP+KGQGTVLTGTVL G V VND IELP L   +KVKSLQVFH  V SA+QGDRVG+CVT LD+KL+ERG+A TPGSV     AI  +R+I+ F+  +   T+ HV+VGH TVMAT  FF                           P  FD+  +YL Q+EM A  +E                     R   Q+ LLRF+ P+ C  NSLLIGSRLD D                                          +  CR+AF+G LL      D +   +YK K REG I R+ +                 V  +GFFKKET L  F+G++VE   G+VG LES FGK GK ++ F +G     +      KL++K+R F     K+ +
Sbjct:    4 PAAPSAATLNINLGILGHVDSGKTSLAKALSTLASTAAFDKNPQSKQRGITLDLGFSAFTTDPSP-RLRDAGYDQVQYTLVDCPGHASLIRTIIGGAQIMDLALLVIDAVKGIQTQTAECLVIAEMTTDRLLMVLNKTDMLPADNRAAHVKKAEERVRRGLKGTKFAEAPMVAVAACPGAEE-----GAPP-------------------------------------------------------------------------------LGITQLIDTLREMTELPRRSADGPFLLSVDHCFPVKGQGTVLTGTVLSGSVKVNDTIELPELKVQKKVKSLQVFHKPVPSAKQGDRVGMCVTQLDSKLLERGLAATPGSVVTMTSAIAALRRIKYFKQPILNRTKFHVTVGHTTVMATPLFFSLPTGAPQESAQL--------------PTTFDFSHEYLRQDEMLASTRE--------------------HRVGQQWALLRFEKPITCPPNSLLIGSRLDTD----------------------------------------IHSSACRIAFYGRLLGAADSPD-QGLKLYKHKQREGVIDRVQDE--------------YTVIGRGFFKKETDLTIFLGLKVEASTGEVGVLESPFGKTGKFKVHFPQGVPKDPKA-----KLHLKYRTFFLASDKRKI 525          
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_005992603.1 (PREDICTED: selenocysteine-specific elongation factor [Latimeria chalumnae])

HSP 1 Score: 408.7 bits (1049), Expect = 5.600e-110
Identity = 271/737 (36.77%), Postives = 362/737 (49.12%), Query Frame = 0
Query:   83 VASPSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAG---RKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEED-----LKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRG-REGGAQGLKV-------GDK-----------------LYIKFRRFVFDPLKKMVQ 787
            +A+ +L     LN N+GV+GH+DSGKTSL ++LS   STAA DK+PQS+ERGITLDLGFSSF L   P+ L S      Q TLVDCPGHASLIRTIIGGAQIIDL++L++D T+G+Q Q+ EC+++ EIT P +V+ LNK DL PE +R+  V  +T  ++K LE +RF+ +PIIPVAA  GG ++       P ++ A+                                                                          G+  L + L+    LP R   GP  +AVDHCF I+GQGTV+TGT+L G +S+ND +E+P L  TRKVKS+Q+FH  V SA QGDRVG+CVT  D KL+ERG+ C+P S+R    AI  VRKI  F+G + T  + H++VGH TVM  VTFF     E                   V    FD+ ++YLYQEE      + EG                      + Q+ LL F+ PV C  N L+IGS+LD D                                          A  CRLAFHG LLE  +++      L    I+K K + G + R+ +                 V  +  FKKET L  FVG++V+   G+ G +E GFG+ GK ++R   G  E   Q L +       GDK                 + + F+R+VFDP KKM+Q
Sbjct:    1 MAAAALADGKTLNFNIGVLGHIDSGKTSLAKALSTTASTAAFDKNPQSKERGITLDLGFSSFSL-DFPAQLAS-EHSRLQYTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLLIGEITCPKMVVVLNKIDLLPEGKRQAAVEKMTKRMQKTLENTRFQGSPIIPVAAKPGGPEA-------PESQTAQ--------------------------------------------------------------------------GIPELIELLKSQTYLPKRDPGGPFLMAVDHCFSIRGQGTVMTGTLLSGSLSINDNVEIPALKMTRKVKSMQMFHKPVTSAMQGDRVGVCVTQFDPKLLERGLVCSPESLRTLHAAIISVRKIPYFKGSIHTKAKFHITVGHETVMGKVTFFSLPSGE-------------------VTENSFDFTQEYLYQEEYHSGDPKVEGKANQQVADGSLP----------RQQWALLEFEKPVTCPRNCLVIGSKLDTD----------------------------------------IHANTCRLAFHGVLLEGFEDKKYPETCLPKLKIFKVKQKAGQVERVSDD--------------YTVIGRSLFKKETNLQLFVGLKVKLSSGEAGVIEGGFGQSGKFKVRLPGGLSEETKQLLSITSKRKSKGDKGDATKEDDGKAEKQPITIILAFKRYVFDPQKKMIQ 571          
The following BLAST results are available for this feature:
BLAST of NO02G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30596.18.600e-20448.85selenocysteine-specific elongation factor [Nannoch... [more]
XP_009037925.12.300e-11638.60putative selenocysteine-specific elongation factor... [more]
XP_002176693.14.400e-11538.47predicted protein, partial [Phaeodactylum tricornu... [more]
CBN75652.15.700e-11537.77SelB, translation elongation factor specific to Se... [more]
GBG26915.13.700e-11437.63Selenocysteine-specific elongation factor [Auranti... [more]
XP_002290286.12.400e-11338.17selenocysteine-specific elongation factor SelB, pa... [more]
GAX16209.14.100e-11338.57hypothetical protein FisN_3Hh309 [Fistulifera sola... [more]
GAX10118.17.000e-11338.57hypothetical protein FisN_3Lh309 [Fistulifera sola... [more]
XP_004346488.12.700e-11238.80selenocysteinespecific elongation factor, putative... [more]
XP_005992603.15.600e-11036.77PREDICTED: selenocysteine-specific elongation fact... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006712NSK006712Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01060.2NO02G01060.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G01060.1NO02G01060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636004gene_685Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g50gene120Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01060.2NO02G01060.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G01060.1NO02G01060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01060 ID=NO02G01060|Name=NO02G01060|organism=Nannochloropsis oceanica|type=gene|length=5767bp
AGGCGTGGAGCACCGGCCAGCCTGCCACACGGTCGGGTATGTGTCAGTGT
GTGGAATACAACGCAGAGAACGGTGAGTGGTCGTTAATACCTTTATCTCC
CAGAAGACACAAGTCCTCCTCCCGAGTCTTTCCCCCCCGACCCTCCCCTC
TCCGTTTTTCGCGCTCAGCGTGCCAAGTGGGGATCTCCAACGACGGCACT
GCAAAAACTTCGCGTTATGTCCGGGGCACTAATATGAAGGGTATCTTGAA
TGATTTATCAAACTCCTTATTACACGGGCATGCTATGAGCGATGCAGTCA
TTTGCGTTGACTTTCTTAATAAAAAAAAACAAAAAAAAAGGCTTTGGCGG
TGGTGCTCTACCTCGGATTCCTGGCATGCTTGCCCTTGTGTCATGCAGTA
GTAAAATGTCTCAGGGAGACGGAAAAAAAGCATGAATTTTCGGACCATCG
CGTGCCCGCTTGCCGTCGATCGGTCTTTCAAGAGCGTAAATGTCCTAATT
TGACGGACATGAAGGCTTGATTAAATTCTCACCATAGCGAGCTGGATTGT
CCAGCCACTGGCGAGCCTGCTGGCCTGTGTTGTGATTGCTTCTTCATCTT
GTAGCTTCTGTTCCTTCTATTCAACTGACACGCCCTTGCGTGCTAATTTA
TGCCTTCGTAGCACTCATGTGTACGCTCTCAATGCTTTCCACGTCTCCCC
TCTTTCCACCCCTCCACACAGACGCGCTGTTACGCAACACTGACAAGGGT
TTGCTACCAACGGTACCCCCCCCTCTTGTTCTATTGCTTATTGATTGACG
GAACGATTCTCCCCTGACGTGGACTCTTCAGGTACGCCGACTGTTTTGTT
GGTCCAATCTTGGTGTTGTCTTTGCCAGGGGTGTTGGGGTGAGGTGGGAC
GGGTTGGTTGAGCTCCGAAGGGTGGGAAGAGTCACTAGTTTGGAGCAGGA
GGCCACCTAGTCGCATATTTGTCGTGAAACTCTAAGCGCTGGAGATTTAT
ATGGGTTCCACACGTTACATGTCTTTCCGCCTGCAACACCTTGGACATAA
AAGTGGCGCCAGCCTAGACATGGCCTGTGTGTCCCAGCTTTCCCTTCCGC
TCCGAGGGGTCAAATTGGCCGGCTTTTGCCCTTCAGAGGGAAATGTCCGA
AGGAAATCATGCCCTCTTTCCCTCCCTCCCTCTCCTTTTCCCATCACTGA
CTGGAAACTTCCACCCTCGCCCAACTCATCCAAAGCGTACGCGTCGAGGG
GGGGATCGACCTTGTCTCCATCCCTACCTTCCATTCTCACAGGCACAAAT
ACCCTCTATGTGATTGCCCTCCAAGTTTTTCGTGAGCAAAAACTTGGGTC
CAATCTTCTGATCGTAATTATAAATTAAAAACACTTTCTCCTTGCCCTCT
ATCCCTTCCCCTTCCTCTCTCTCGCTCCCTTTTGCCCCCACCTTATCCCT
CCCACAGCAGCTTCCAATTCCACCGCCTGGTTCCCGTGTGGATTCCTGCT
GCTACGTGAGAAGGTCAGACGAGACGACAGCCTCCTGCGTGGCACAAAAG
CTAGAACAACAAGAAGAAGTAGCAGCAGCAGCCGCAGCAGCAACATGTGC
TACGAAGACATTTCTAGCAGGAACAGCGGCATCAGGGGGCCTTTGCCACA
ACGGAGGCAGCAGGAAGCAAGAGGGGAAGGAGGGAAACCCGCGATCATCG
ACGATCACCCCCAAATCACTTCCATCCCCACCCCCACATTAAGTACCGCT
TCCGGTACCACGTCATCTTCCTCGTCATCCTCCACCTCCTCCTCCCCTCC
CTCCCCCTCCTCCTCCACCGCCACCTTCCTCCCTTCTGCAGTCGCCTCTC
CCAGCCTCCCGACCTCCCTTCCCCTCAACATCAACGTCGGTGTCATGGGC
CACGTCGACTCCGGCAAAACATCACTTGTTCGGTCACTCTCCAACCACCT
TTCTACGGCCGCCCTCGACAAACACCCTCAATCCCAAGAGCGGGGCATCA
CCCTTGACCTGGGTTTCTCCTCCTTTCTCCTCCCCACCCTCCCCTCCTCC
CTCCCCTCCATCCCTGGCGAAGCATTTCAAATCACCCTTGTGGACTGTCC
GGGCCATGCTTCTCTGATCCGGACCATCATTGGAGGCGCACAGATCATCG
ATTTGGTCCTCCTCCTCGTGGATGCCACCCGAGGCCTGCAGGCCCAAACG
GTGGAGTGCGTCATTCTGGCCGAAATCACTACCCCTTCCCTAGTCATCGC
CCTGAATAAGACCGATCTTTTTCCCGAAAAGGAGAGGGAAGGGAAGGTCA
GGGATGTAACGGCTAGTCTGAGGAAAGCTCTAGAAGGATCGAGATTTGAA
CACGCGCCCATCATCCCAGTAGCGGCGATCGTGGGGGGAGAGAAGTCCGT
TGGGGCGTCATCGTCACCACCTGCAGCAGAAAGGGCAGAATTAGTAGAAC
CAGTAGCAACAGCATCAAAAGAAGGAGACAAATCAGTAACGGGCCGTGTG
GCGACGCTCGCAGGAAATAATATTGATAAAAAGAAGAAGAAGAAGAGAAA
TGAAGAGCAGGTCGGAAAGGCAAAGGATGCGCTGACGACCACCACAAATA
ATAAGGGCAGCAGCAGCAGTTACAGCAGTAGCAACAGTAGCAGCAGTGGT
AGGAAGAATTTGGGATTAGATGCCTTGTGTCAGGCGTTACGAGAGGCCAT
CCGCCTTCCATCTCGGTCAGCTGCTGGCCCGCTGTACTTGGCAGTCGACC
ATTGTTTCCCTATCAAGGGGCAAGGAACGGTGTTGACAGgttgagcgaag
ggagggtgggagggaggaatggagggtgggagagggaataaggaggggaa
ggaggaggcggccggacgggagggagggagaacgggaaagtcgcacagca
ggcttgtcgagctatctcttgagatgtctcaccaacccctccgcaccttt
ccttccttccctccctccttcttttcctcatcagGCACGGTCCTACACGG
CCAGGTGTCTGTTAACGACATCATCGAGCTGCCAGGTCTGGGGCAAACCC
GGAAAGTGAAGTCTCTCCAGGTATTCCACGCGGCCGTGAAGAGTGCGCGA
CAAGGCGATCGCGTAGGTCTGTGCGTGACAAATCTCGACGCCAAATTAAT
AGAGAGAGGAGTTGCCTGTACTCCAGGGAGTGTCCGAAGGGCTGACTTTG
CGATTGGGGTGGTAAGAAAGATAAGGGCCTTCAGGGGGAGAGTCAAGACG
GGAACAGAGGTTCACGTATCAGTCGGCCACGGCACGGTCATGGCGACGGT
GACATTTTTTGGCGCGAAAGAGTTAGAAAGGATGAGGGAACGGGGGAGGA
AAGAGGAGAGAGGAGGGAAGGAAGAGGTATGGAGCGTGCCGCCGCTGCCG
TTTGATTGGGATAAGGATTACTTGTACCAGGAGGAAATGGCGGGGAGGAA
GGAGGGGGAGGAGGGAGGGGAGGGGAGAGGAAGGGAGGGTCGTGGTGGAG
GAGGAAGAGAAGAGCGACGGTTTCAGATGCAGTACGTGTTGTTAAGGTTT
AAGAGCCCGGTCTTGTGCCGTGTCAACAGCCTTTTGATTGGCTCCCGCCT
CGACGCGGACACTGCAGGGAGCGGTGGCCAGCAGCAGCAACAACACTACC
AACAGCAGCAGTATGGCCAGGGACCAAAAAACGCTGCGAGAGGTGGTGGT
GCTGCTGCCCGTTCGTTCTCCTCTTCTTCTTCCTGGGCAGGAGGTTGTCG
TCTGGCATTCCACGGCACCCTGCTTGAGGTCCTGAAGGAGGAAGATCTGA
AAAGCTTCCTCATTTACAAACCCAAACTCCGAGAAGGGAGCATTTACCGG
CTTGGGGAACCTTCGCATAGCCCTTCCTCCCTCCTTCCCTCCCTCCCTCG
GTATCGCGAGGTGACAGCGCAGGGTTTTTTTAAGAAGGAGACGACGCTGG
GGCCGTTTGTAGGAATGGAGGTGGAGACGGAGGACGGGCAGGTGGGGAGG
TTGGAGTCAGGTTTTGGGAAGGGGGGAAAGGTGAGGATTCGGTTCGACAG
AGGGAGGGAGGGAGGGGCGCAGGGGTTGAAGGTGGGGGATAAACTTTACA
TAAAGTTTCGGAGGTTTGTGTTTGACCCCCTGAAGAAGATGGTGCAGAGG
AGGAGGGAGGGAGGGATGGGGTTGCTGATGGGAGGTGGAAAAGGGTTGAT
TCTGGAGAAGGACGAGGGGGGGCATGAGCTGAAGGAGGAGGAGGGGGAAA
GGGTAGAGGAGGGAGGGAAGGAGAAAGAGGTGGAAGGAGGGCAGAAGGAG
GAAGAGAAGGAAGGCGAAGAGAATCCAGCAGCTGTGAGTGGCGACAGTTA
CCCAGAAGCCCACCGGCAACAGCATCAGCAACAGCAGCAACAAGCGTTTC
ATCCAGACCAGCCACTCGAAGGCGTGGACATTTCTGCCTTGGAAACGACA
ACCGCTGAGATGAGCCTCCGTGGCCATCACCATCACCATCACCATCTCCT
CCAACAAATGCAGCAAGACGCCACCGCAGCCCCCACCGTCCCCGCCGGAG
GGCGAGGAGGAGGGACCTACAACACGTTTTCCTTAGCCACCTCTTCCTTG
GCTTCGCCCCTACCAGCAGTGAGAGACATGGAATTAAGGTTTGGTAAGGT
AGATGCGGTGCGGGCTGGAGACCTGGTGATAGTGAAGGGCTTCTTTAGCA
TGGAGGAGGATATTCGCAAATACATCGGCTTGAAGGTAGTGCCGACCGAG
AGGGGAAAGGAGGGAGGGGAGGAGGAAGGAAGAAGGGGGCCAGAAGGGTA
TGTGGTGGGCCCGTTTGGAAAGGGAGGAAAGGCAAAGGTTCAGTTTTCGA
GCCCGTTTGACGGCGGGGTGGGGACGTCGTTGACTCTGTATGTTATGACG
ACGGCGAGAGCGGGAGTAGATGAAGGAGAGGGAGAAGGGGAAGAGCGGTG
ATAACGGTAACGGGAGGCGGCCAAACCTGAGGCGAGACTTTTCTGTACAA
GGAGAGAATGAGGAGGATTATAGAAAAGAGGAGGGGGCATTGGGTGATTG
TTTAGCCAAGTGCCGACGAGAGAAGAACGGGGTCGTTCTTCGTTCACACG
TAGAAAATGAGGCAGGAGACGAAGGAAAGAGCGACTGAGAGAAAGGAATT
GGTGTCATGCCATGTGCTTGATTGATGTCGATCCATTTGGGAAATGAGAG
AAAGAAAGGGAGAGGGAAGAAGTGAAAAATTAAGTCGTAGGAAGGAGTAG
TGAGAACCACAGGATGGAGGAGATAGCGAATTGTGAACTGAAAACTCACA
GCAGCGGCAACAGGCACAGCAGTATTGGTAGCAGATTGGAATGAGGACGG
ATGAGCATGCATTTGCTATTTTCGTATTTTTAACCTTTTTTCGCACCGGC
GAAAAGATTGTCATGTCATCTTGGCGGCAGAGGTGGGGTGCCCGCCGCAA
GGGGGGGAAATCCGAAGCAGGACTAACGAGAAAAGATTCAGGAGGAGGAA
GATTGAGACGAAGGAGGTGTTGGTGATTGTGGAGGAGGAGGCGGTAGAGC
AAGAGACATGTAGACATGTGAGTATTGAGTAAGGGTACTAGTAGCTATGG
AGTTAAAGTAGGTCCAGATTTCTAAGCGAGGCGAGATTGCATGCAATGCA
GGTAGATGTGATAAAGTTTCACCACTTCAAAGAGTAATAATTTCTCTTTC
GTATTTCGTATTCGCTTCGTGAAAAGCATGGACAGGACAAGAGAAAACCG
ATACATACTAAGATTGT
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protein sequence of NO02G01060.2

>NO02G01060.2-protein ID=NO02G01060.2-protein|Name=NO02G01060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bp
MCYEDISSRNSGIRGPLPQRRQQEARGEGGKPAIIDDHPQITSIPTPTLS
TASGTTSSSSSSSTSSSPPSPSSSTATFLPSAVASPSLPTSLPLNINVGV
MGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLP
SSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQA
QTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSR
FEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTG
RVATLAGNNIDKKKKKKRNEEQVGKAKDALTTTTNNKGSSSSYSSSNSSS
SGRKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGT
VLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLD
AKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTV
MATVTFFGAKELERMRERGRKEERGGKEEVWSVPPLPFDWDKDYLYQEEM
AGRKEGEEGGEGRGREGRGGGGREERRFQMQYVLLRFKSPVLCRVNSLLI
GSRLDADTAGSGGQQQQQHYQQQQYGQGPKNAARGGGAAARSFSSSSSWA
GGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLP
SLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRI
RFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQRRREGGMGLLMGGG
KGLILEKDEGGHELKEEEGERVEEGGKEKEVEGGQKEEEKEGEENPAAVS
GDSYPEAHRQQHQQQQQQAFHPDQPLEGVDISALETTTAEMSLRGHHHHH
HHLLQQMQQDATAAPTVPAGGRGGGTYNTFSLATSSLASPLPAVRDMELR
FGKVDAVRAGDLVIVKGFFSMEEDIRKYIGLKVVPTERGKEGGEEEGRRG
PEGYVVGPFGKGGKAKVQFSSPFDGGVGTSLTLYVMTTARAGVDEGEGEG
EER*
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protein sequence of NO02G01060.1

>NO02G01060.1-protein ID=NO02G01060.1-protein|Name=NO02G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bp
MCYEDISSRNSGIRGPLPQRRQQEARGEGGKPAIIDDHPQITSIPTPTLS
TASGTTSSSSSSSTSSSPPSPSSSTATFLPSAVASPSLPTSLPLNINVGV
MGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLP
SSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQA
QTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSR
FEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTG
RVATLAGNNIDKKKKKKRNEEQVGKAKDALTTTTNNKGSSSSYSSSNSSS
SGRKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGT
VLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLD
AKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTV
MATVTFFGAKELERMRERGRKEERGGKEEVWSVPPLPFDWDKDYLYQEEM
AGRKEGEEGGEGRGREGRGGGGREERRFQMQYVLLRFKSPVLCRVNSLLI
GSRLDADTAGSGGQQQQQHYQQQQYGQGPKNAARGGGAAARSFSSSSSWA
GGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLP
SLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRI
RFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQRRREGGMGLLMGGG
KGLILEKDEGGHELKEEEGERVEEGGKEKEVEGGQKEEEKEGEENPAAVS
GDSYPEAHRQQHQQQQQQAFHPDQPLEGVDISALETTTAEMSLRGHHHHH
HHLLQQMQQDATAAPTVPAGGRGGGTYNTFSLATSSLASPLPAVRDMELR
FGKVDAVRAGDLVIVKGFFSMEEDIRKYIGLKVVPTERGKEGGEEEGRRG
PEGYVVGPFGKGGKAKVQFSSPFDGGVGTSLTLYVMTTARAGVDEGEGEG
EER*
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Synonyms
Publications