NO02G01050, NO02G01050 (gene) Nannochloropsis oceanica

Overview
NameNO02G01050
Unique NameNO02G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3422
Alignment locationchr2:325342..328763 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeriplasmic protease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:325342..328763 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0016021integral component of membrane
GO:0005886plasma membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0008233peptidase activity
GO:0008233peptidase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom
IPR013703Peptidase_S49_N_proteobac
IPR002142Peptidase_S49
Homology
BLAST of NO02G01050 vs. NCBI_GenBank
Match: EWM30553.1 (periplasmic protease [Nannochloropsis gaditana])

HSP 1 Score: 509.2 bits (1310), Expect = 2.400e-140
Identity = 327/566 (57.77%), Postives = 370/566 (65.37%), Query Frame = 0
Query:  233 PIRSYGVGQKQSLVARLVMKASKALNITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFILYFFRHLITFKATMQTLMIISILAEIAGRLGLLKDLKFPSPPFPSSLSPSSRGLSSTRGPPIFNFELMNGKFQVDKIRLSLLTGDMMGEALATATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEVRHTTVYGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKVTPAPEGRRFPG-FLLPGRGGGRDGGGAGMPIGASLGL----------VRECVKWVKR 788
            P  +Y VG KQSLVARL   A+K LN T                                               +LY  RHL TFK TMQ LMI+SILAEIAGRLGLLKDLK PSPPFPSSLS + R L+S RGPP+F FEL+NG++Q D+IRLSLLTGD  G+AL     XXXXXXXXXXXXXXXXXXXXXXXX                    TE RHT  YG                                                                YVV++KGDM LSQGAYLTS+VSFLLE+AR  PGGDEL+LLLESGGGAAYEYGL++AQLERLRRAG++LTVCVDK+AASGGYM+AVVADTL+AAPFAT+GSIGATTSVPVLNVG  L+R+GI AY++K+GKHKGSGGM LVGDAKGDQ+AL KL+EDL+KVHEAFKAHI RWR+MVDVE VGTGEVWQGREAKALGLVDE+MTSEEYLAWRLLTHDV+KV+PAP+ RRFPG F LPG+GGG  GGGA  P+G +  +           R CVK + R
Sbjct:  194 PGHTYQVGPKQSLVARL---AAKVLNQTSSSVSLPSTNATVVAPSLVRALKTLPRKQLFALGFKIVLVGG-----VLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLS-TPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPLW--------------TEARHTQTYG------MTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGA--PLGPTTAMAVLTSIREMVARRCVKRIGR 728          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: XP_005855041.1 (periplasmic protease, partial [Nannochloropsis gaditana CCMP526] >EKU21317.1 periplasmic protease, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 287.7 bits (735), Expect = 1.100e-73
Identity = 197/328 (60.06%), Postives = 219/328 (66.77%), Query Frame = 0
Query:  308 ILYFFRHLITFKATMQTLMIISILAEIAGRLGLLKDLKFPSPPFPSSLSPSSRGLSSTRGPPIFNFELMNGKFQVDKIRLSLLTGDMMGEALATATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEVRHTTVYGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVG 636
            +LY  RHL TFK TMQ LMI+SILAEIAGRLGLLKDLK PSPPFPSSLS + R L+S RGPP+F FEL+NG++Q D+IRLSLLTGD  G+AL     XXXXXXXXXXXXXXXXXXXXXXXX                    TE RHT  YG                                                                YVV++KGDMFLSQGAYLTS+VSFLLE AR  PGGDEL+LLLESGGGAAYEYGL++AQLERLRRAG++LTVCVDK+AASGGYM+AVVADTL+AAPFAT+GSIGATTSVPVLNVG
Sbjct:   19 VLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLS-TPRALASVRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPLW--------------TEARHTQTYG------MTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMFLSQGAYLTSVVSFLLETARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVG 325          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_096004625.1 (protease SohB [Pseudomonas sp. MT5] >PBK04318.1 protease SohB [Pseudomonas sp. MT5])

HSP 1 Score: 174.5 bits (441), Expect = 1.400e-39
Identity = 101/219 (46.12%), Postives = 141/219 (64.38%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKV 742
            YV++  GD+  S    L   VS +LE+ARP    DE+++ LESGGG  + YGLA++QL R+R AG+ LT+ VDKVAASGGYMMA +AD ++AAPFA +GSIG    +P  NV   L++  I    + +G++K +  +F     KG +    K QEDL  +H  FKA +AR+R  +D++ V TGEVW G EA + GL DE+ TS++YL  R+   DV +V
Sbjct:   95 YVLNFHGDIKASALENLRHEVSAVLEIARP---SDEVLVRLESGGGMVHAYGLAASQLVRVREAGIPLTIAVDKVAASGGYMMACIADRVLAAPFAMLGSIGVVAQLP--NVHRLLKKHDIDFEMLTAGEYKRTLTIFGENSDKGRE----KFQEDLETIHRLFKAFVARYRPTLDIDAVATGEVWFGSEALSRGLADEIKTSDQYLCERVRQADVFEV 304          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_028669997.1 (protease SohB [Saccharospirillum impatiens])

HSP 1 Score: 174.1 bits (440), Expect = 1.800e-39
Identity = 100/224 (44.64%), Postives = 143/224 (63.84%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKVTPAPE 747
            +V+  KGDM  SQ   L   V+ +++VA      DE++++LES GGA   YGLA++QL R++ AG+ LTVCVDKVAASGGYMMA +AD +IAAPFA VGSIG    VP  N+   L+R  +    + +GKHK    M L+G+    ++   KL +DL  +HE FK  + R+R  +D+  V  G+ W   +A+ LGLVD++ TS+ YL  ++ T+DV+ VT  P+
Sbjct:   93 WVLRFKGDMHASQVDNLRREVTAIIQVAN---ATDEVVVVLESPGGAVSGYGLAASQLVRVKEAGLSLTVCVDKVAASGGYMMACIADRIIAAPFAVVGSIGVLAQVP--NIHKLLQRHQVDVEVLTAGKHKAP--MTLMGEK--TEEGRQKLLDDLKAIHERFKELVGRYRPQLDLAAVTEGDFWLAEDARELGLVDQLETSDAYLLGKVKTNDVVSVTWVPQ 307          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_104737682.1 (protease SohB [Pseudomonas oceani] >POB04639.1 protease SohB [Pseudomonas oceani])

HSP 1 Score: 173.3 bits (438), Expect = 3.100e-39
Identity = 100/219 (45.66%), Postives = 140/219 (63.93%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKV 742
            YV++  GD+  S    L + V+ +LE+ARPQ   DE+++ LESGGG  + YGLAS+QL R+R AG+ LT+ VDKVAASGGYMMA +AD ++AAPFA +GSIG    +P  N    L++  I    + +G++K +  +F     +   +A  K Q+DL  +H  FK  +AR+R  +DVE V TGEVW G EA   GL DE+ TS++YL  R+   DV +V
Sbjct:   95 YVLNFHGDIKASALENLRNEVTAVLELARPQ---DEVVVRLESGGGMVHAYGLASSQLVRVREAGIPLTISVDKVAASGGYMMACIADRVLAAPFAMLGSIGVVAQLP--NFNRLLKKHDIDFEMLTAGEYKRTLTVF----GENSDKAREKFQDDLENIHGLFKQFVARYRPSLDVEAVATGEVWFGSEALERGLADEIKTSDQYLCERIKQADVFEV 304          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: PQM54497.1 (protease SohB [Deltaproteobacteria bacterium])

HSP 1 Score: 173.3 bits (438), Expect = 3.100e-39
Identity = 100/227 (44.05%), Postives = 143/227 (63.00%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKVTPAPEGRR 750
            YV++  G++  S+   L   +SFLL+VA+P    DE+++ + S GGA  +YG AS+QLERL++AG++   CVD VAASGGYMMA VAD +IAAPFA +GSIG    +P  N    L++  +  +   +GK+K +   F     +G Q    KLQ+DL+ +HEAFK HI   R  VD+E + TGE W   +AK  GLVDE+MTS++YL  +L   ++I++    E  R
Sbjct:  126 YVLTFVGNIMASEVEQLREQISFLLQVAQP---ADEIVVRITSPGGAVPQYGXASSQLERLKQAGLRCIACVDTVAASGGYMMASVADKIIAAPFAIIGSIGVVAGIP--NFHRVLQKNEVDYHLFTAGKYKRTVTPFSEVTDEGKQ----KLQDDLTAIHEAFKQHIKDGRPDVDIEAIATGEYWLASQAKEKGLVDEIMTSDDYLCSKLDDCEIIEIKTEIEQNR 343          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_088276526.1 (protease SohB [Pseudomonas aestusnigri] >SEG57898.1 serine protease SohB [Pseudomonas aestusnigri] >OWL86337.1 protease SohB [Pseudomonas aestusnigri])

HSP 1 Score: 172.9 bits (437), Expect = 4.100e-39
Identity = 99/219 (45.21%), Postives = 139/219 (63.47%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKV 742
            YV++  GD+  S    L   V+ +LE+ARPQ   DE+++ LESGGG  + YGLAS+QL R+R AG+ LT+ VDKVAASGGYMMA +AD ++AAPFA +GSIG    +P  N    L++  I    + +G++K +  +F     +   +A  K Q+DL  +H  FK  +AR+R  +D+E V TGEVW G EA   GL DE+ TS++YL  R+   DV +V
Sbjct:   95 YVLNFHGDIKASALENLRHEVTAVLELARPQ---DEVVVRLESGGGMVHAYGLASSQLVRVREAGIPLTISVDKVAASGGYMMACIADRILAAPFAMLGSIGVVAQLP--NFNRLLKKHDIDFEMLTAGEYKRTLTVF----GENSDKAREKFQDDLENIHRLFKQFVARYRPSLDIETVATGEVWFGSEALLRGLADEIKTSDQYLCERVRQADVFEV 304          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_084310383.1 (protease SohB [Pseudomonas jinjuensis] >SDN14028.1 serine protease SohB [Pseudomonas jinjuensis])

HSP 1 Score: 172.2 bits (435), Expect = 7.000e-39
Identity = 100/220 (45.45%), Postives = 139/220 (63.18%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKVT 743
            YV+   GD+  S   +L   V+ LL +A PQ   DE++L LESGGG  + YGLA++QL R+R AGV LTVCVDKVAASGGYMMA +   ++++PFA +GSIG    +P  NV   L++  I    + +G++K +  +F     KG +    K QEDL  +HE FK ++AR+R  + +E V TGEVW G+ A    LVDE+ TS+EYLA R    DV +++
Sbjct:   94 YVLDFDGDLKASATEHLRHEVTALLSMATPQ---DEVVLRLESGGGMVHGYGLAASQLARIREAGVPLTVCVDKVAASGGYMMACIGQKILSSPFAILGSIGVVAQLP--NVHRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGRE----KFQEDLETIHEQFKGYVARYRPQLSIEEVATGEVWLGQVALGKQLVDEIRTSDEYLAARAREADVYQLS 304          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_069900186.1 (MULTISPECIES: protease SohB [Pseudomonas] >OEO25515.1 protease SohB [Pseudomonas sp. J237])

HSP 1 Score: 171.8 bits (434), Expect = 9.200e-39
Identity = 98/216 (45.37%), Postives = 138/216 (63.89%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDV 739
            +V+   GD+  S    L   ++ LL +A PQ   DE++L LESGGG  + YGLAS+QL R+R AGV LTVCVDKVAASGGYMMA + + +I+APFA +GSIG    +P  N+   L++  I    + +G++K +  +F     KG +    K QEDL + HE FK  +AR+R  +D++ + TGEVW G  A+   LVDE+ TS++YLA  L +HD+
Sbjct:   93 FVLDFDGDIKASATDNLRHEITALLSMATPQ---DEVVLRLESGGGMVHSYGLASSQLARVREAGVPLTVCVDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLP--NIHRLLKKNDIDFEVLTAGEYKRTLTVFGENTEKGRE----KFQEDLEQTHELFKGFVARYRPQLDIDAIATGEVWLGLAAQEKLLVDELKTSDQYLAEHLASHDL 299          
BLAST of NO02G01050 vs. NCBI_GenBank
Match: WP_090512156.1 (protease SohB [Pseudomonas marincola] >SFT93204.1 serine protease SohB [Pseudomonas marincola])

HSP 1 Score: 171.8 bits (434), Expect = 9.200e-39
Identity = 98/216 (45.37%), Postives = 138/216 (63.89%), Query Frame = 0
Query:  523 YVVSVKGDMFLSQGAYLTSLVSFLLEVARPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAASGGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKSGKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVEVVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDV 739
            +V+   GD+  S    L   ++ LL +A PQ   DE++L LESGGG  + YGLAS+QL R+R AGV LTVCVDKVAASGGYMMA + + +I+APFA +GSIG    +P  N+   L++  I    + +G++K +  +F     KG +    K QEDL + HE FK  +AR+R  +D++ + TGEVW G  A+   LVDE+ TS++YLA  L +HD+
Sbjct:   93 FVLDFDGDIKASATDNLRHEITALLSMATPQ---DEVVLRLESGGGMVHSYGLASSQLARVREAGVPLTVCVDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLP--NIHRLLKKNDIDFEVLTAGEYKRTLTVFGENTEKGRE----KFQEDLEQTHELFKGFVARYRPQLDIDAIATGEVWLGLAAQEKLLVDELKTSDQYLAEHLASHDL 299          
The following BLAST results are available for this feature:
BLAST of NO02G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30553.12.400e-14057.77periplasmic protease [Nannochloropsis gaditana][more]
XP_005855041.11.100e-7360.06periplasmic protease, partial [Nannochloropsis gad... [more]
WP_096004625.11.400e-3946.12protease SohB [Pseudomonas sp. MT5] >PBK04318.1 pr... [more]
WP_028669997.11.800e-3944.64protease SohB [Saccharospirillum impatiens][more]
WP_104737682.13.100e-3945.66protease SohB [Pseudomonas oceani] >POB04639.1 pro... [more]
PQM54497.13.100e-3944.05protease SohB [Deltaproteobacteria bacterium][more]
WP_088276526.14.100e-3945.21protease SohB [Pseudomonas aestusnigri] >SEG57898.... [more]
WP_084310383.17.000e-3945.45protease SohB [Pseudomonas jinjuensis] >SDN14028.1... [more]
WP_069900186.19.200e-3945.37MULTISPECIES: protease SohB [Pseudomonas] >OEO2551... [more]
WP_090512156.19.200e-3945.37protease SohB [Pseudomonas marincola] >SFT93204.1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006711NSK006711Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01050.1NO02G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G01050.2NO02G01050.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|511751gene_682Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g48gene119Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01050.1NO02G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G01050.2NO02G01050.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01050 ID=NO02G01050|Name=NO02G01050|organism=Nannochloropsis oceanica|type=gene|length=3422bp
CCGCATTCTTTGCTTCGATTGCCTGTTCTATCTACACGCTTACGATACAA
CCACACCCAACGCATACGAGCTCAGGGGAAGGGAGGAGCTTAACGTGCCG
GTTCTCATCATGACAGACGCAGCAATAAAAACCATTTCTGATGAGCAGAG
CAGGCAAAGAAGACGAAGAATAGCCTCCCTATTTCCGGGAAGGTCGCTAG
TCCTCCTCCAGCTCCTCCTGCTGGGCTTCTTGGGACTATCGTCCGTGCCC
CACGGCACTGCTGCACCTGCACCACTGGACTATGAGAATGAAAACTTGGA
AACGTCATCCCGGGCGGGCATGAATGCAAACGCCACGACAACGAACGTGG
CAACTGCTGTATCTCAACCCCCTCCAGTGGACGGGCTGCCTGTGACGCCC
ACTTCCGAGGGAGGCCTCCAAGGAATGCTTCAAGTGAAAGCTCAGGAAGA
AAAGTTGGATGCTGATCAGCTTGGGGCTGCGTCCACTGGTGCCCCGGCGG
GGGGAGACGACGACGAGGAGGAGGAGGAGGAGGAAGAGGAGAGGGAGGAG
GGGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGAAAGAAGAAGAAGAAAT
GGAGCAGAAAGACTGTAAGGAGGACGAGGAGGAAAAAGAAGAAAGTGATG
AAAAAGAAAAAGATCGTGATGACGAAGAGGATGACGATGAAGAGGATGGC
GAGGACGATGTGGAAAAAGGAGGAGGCGAAGAAGAAGAAGAAGAAGAAGA
GGAAGAAGCTGACGAGAAGGTATTCGATCCTGACTTTAAGCGTCGTGGGT
TCACACCTATCAGGAGCTATGGCGTTGGGCAAAAGCAGTCGCTCGTTGCT
CGTCTCGTCATGAAAGCCAGCAAAGCCCTAAACATCACCTCCACCTCCAC
CTCTTCTTCCTCCTCCAACACTACCACCTCTAACACCACCTCCCTCTCCA
CCGCTCCTCTCCGAGCTCTACGCTCCCTTCCCGCCAAGCAACTCTCCTCC
CTCTCCCTCAAGTTCCTCCTCCCCCTCTTCATACTCTACTTCTTCCGGCA
CCTCATCACTTTCAAAGCCACCATGCAAACCCTCATGATCATCTCGATCC
TCGCTGAAATCGCCGGCCGTCTCGGCCTACTCAAAGACCTGAAATTCCCC
TCCCCCCCCTTCCCCTCCTCCCTTTCCCCCTCTTCACGGGGCCTCTCCTC
CACCCGCGGTCCCCCTATTTTTAATTTCGAGTTAATGAACGGTAAATTTC
AAGTAGATAAAATAAGATTGAGTCTCCTCACTGGTGATATGATGGGTGAA
GCCTTGGCTACTGCAACGGCTGCGCGTAAGGCTGCCCTGACAGCAGCTGT
GATGGCTGCGACTAGCGGTGTGAGTGGGAAAGGAGGAGAAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGAAGGAGGAGAAGGCGTG
GTGACAGAGGTGAGGCATACGACGGTGTATGGTGACGGCGAGAACAGCAG
CAGTAGCAGCAGCAGTGGCAGCAGCAGTGGCAGCAGGAATGCAGCGTCTT
GCTCGCAAGTTTCTCCCACCCCTACCTCGATCAATGAGAGCACCAACACC
TCCTATCCAAGAAAGACAACCACGTCAACTGTCCCCGTCCCTCCTTCCAT
CCCTCCCTCCCCTCGTCCTCGCGCATACGTCGTGTCCGTCAAAGGCGACA
TGTTCCTCTCTCAAGGTGCATATCTCACCTCCCTCGTTTCATTTTTATTG
GAAGTGGCACGTCCTCAACCGGGAGGGGATGAATTAATATTATTGTTGGA
GTCGGGAGGTGGTGCAGCGTATGAGTACGGCTTGGCCTCGGCTCAACTCG
AGgtgagaatgggggggagggcgggaggagaggaggggaaaggcgctcga
tggatacgtgtaattgtgggagtcggatgaatcaggggagagagggggaa
gtgaaggctagaatgagcgtttgcgtatgggcttgtgtcggcagagcgag
gtctacccacgtaatccactaccacatcgtcacctcattgatttcttccc
tccctctcctcttccttcctccctttcctccccctttcaccaactacacc
cacagAGACTTAGGAGGGCAGGGGTGAAGCTGACGGTGTGCGTGGACAAA
GTCGCTGCCAGTGGGGGATACATGATGGCGGTGGTGGCCGACACGTTGAT
TGCCGCGCCCTTTGCGACAGTTGGCAGCATCGGGGCCACCACCAGTGTGC
CTGTCCTCAACGTCGGGGGTTTCTTGAGGCGGGTGGGGATCCAAGCATAC
ACAGTCAAGTCAGgtagacaatacccacttcctactttctcccttccatc
cttcttcatcccctccccatctttcccatattcttactttagaagtggca
acgtgcatttttggaggttgagtggacatgtccttctcctctctgagccc
ccctccttccctccctccccctctccctcccctctttcagGTAAACACAA
AGGCAGCGGAGGCATGTTTCTTGTGGGGGATGCCAAAGGCGACCAGCAAG
CGCTCGCCAAACTCCAAGAAGACTTAAGCAAAGTGCACGAGGCGTTCAAG
GCCCACATCGCAAGGTGGCGCGAAATGGTAGACGTGGAAGTGGTAGGCAC
AGGGGAGGTCTGGCAAGGTCGGGAGGCGAAGGCCCTGGGGTTGGTTGATG
AGGTGATGACCAGCGAGGAGTATTTGGCGTGGAGACTTCTCACTCACGAT
GTGATCAAAGTGACGCCTGCTCCGGAGGGGAGGAGGTTTCCCGGCTTCTT
GCTGCCTGGACGAGGGGGAGGAAGGGATGGAGGAGGAGCGGGGATGCCTA
TTGGTGCGAGTTTGGGCTTGGTGAGGGAGTGCGTGAAGTGGGTTAAGAGG
GGTAGGCGGAGGAGGAGGGTGGGGATGGGGGGGAAGGTGGCCGTGGAGGG
GAGGGAGGAGGAGGAGGAGGAGGACGAGGAGGAGGAGGGGGCGAAAAGGG
CTATAGTGGGGGATTTGGTGGGACGTGCGGTATCGTGGTTGATGGGGCGG
CCGCAGCCTCCGATATTTTGTTAAGGGGAAAGGGCTGGGAAGGGATAGAG
ACTGAAATAAGGAGGATCGGAGGGAGAAGGGAGAAATGACACAAATACGC
TTATGCATATATATCGTTTATAGGTGGAGGGAGCGCGGGAAAGTGCAAGG
TTTGTTTTGGCTTGCTTTGAGCGAGCCATATAATCAGAACATGGGCTTCT
GGCTCCGCTTTTCCGAGTCGAGACCCGCCACGGAGCAAACTTAGAAAAAA
AGCTTGTCAATAGATTTTCTGCTAATGATTGGCGAAATACCTTAACATTT
ATTTATATGACATGAGGCCATTGAGGAATGAATACCTAAAGAACAAAAAA
GATAGTGCAAGTTACGGACATA
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protein sequence of NO02G01050.1

>NO02G01050.1-protein ID=NO02G01050.1-protein|Name=NO02G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=845bp
MTDAAIKTISDEQSRQRRRRIASLFPGRSLVLLQLLLLGFLGLSSVPHGT
AAPAPLDYENENLETSSRAGMNANATTTNVATAVSQPPPVDGLPVTPTSE
GGLQGMLQVKAQEEKLDADQLGAASTGAPAGGDDDEEEEEEEEEREEGEE
GEEEEEEEKEEEEMEQKDCKEDEEEKEESDEKEKDRDDEEDDDEEDGEDD
VEKGGGEEEEEEEEEEADEKVFDPDFKRRGFTPIRSYGVGQKQSLVARLV
MKASKALNITSTSTSSSSSNTTTSNTTSLSTAPLRALRSLPAKQLSSLSL
KFLLPLFILYFFRHLITFKATMQTLMIISILAEIAGRLGLLKDLKFPSPP
FPSSLSPSSRGLSSTRGPPIFNFELMNGKFQVDKIRLSLLTGDMMGEALA
TATAARKAALTAAVMAATSGVSGKGGEGGGGGGGGGGGGGGEGGEGVVTE
VRHTTVYGDGENSSSSSSSGSSSGSRNAASCSQVSPTPTSINESTNTSYP
RKTTTSTVPVPPSIPPSPRPRAYVVSVKGDMFLSQGAYLTSLVSFLLEVA
RPQPGGDELILLLESGGGAAYEYGLASAQLERLRRAGVKLTVCVDKVAAS
GGYMMAVVADTLIAAPFATVGSIGATTSVPVLNVGGFLRRVGIQAYTVKS
GKHKGSGGMFLVGDAKGDQQALAKLQEDLSKVHEAFKAHIARWREMVDVE
VVGTGEVWQGREAKALGLVDEVMTSEEYLAWRLLTHDVIKVTPAPEGRRF
PGFLLPGRGGGRDGGGAGMPIGASLGLVRECVKWVKRGRRRRRVGMGGKV
AVEGREEEEEEDEEEEGAKRAIVGDLVGRAVSWLMGRPQPPIFC*
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protein sequence of NO02G01050.2

>NO02G01050.2-protein ID=NO02G01050.2-protein|Name=NO02G01050.2|organism=Nannochloropsis oceanica|type=polypeptide|length=607bp
MTDAAIKTISDEQSRQRRRRIASLFPGRSLVLLQLLLLGFLGLSSVPHGT
AAPAPLDYENENLETSSRAGMNANATTTNVATAVSQPPPVDGLPVTPTSE
GGLQGMLQVKAQEEKLDADQLGAASTGAPAGGDDDEEEEEEEEEREEGEE
GEEEEEEEKEEEEMEQKDCKEDEEEKEESDEKEKDRDDEEDDDEEDGEDD
VEKGGGEEEEEEEEEEADEKVFDPDFKRRGFTPIRSYGVGQKQSLVARLV
MKASKALNITSTSTSSSSSNTTTSNTTSLSTAPLRALRSLPAKQLSSLSL
KFLLPLFILYFFRHLITFKATMQTLMIISILAEIAGRLGLLKDLKFPSPP
FPSSLSPSSRGLSSTRGPPIFNFELMNGKFQVDKIRLSLLTGDMMGEALA
TATAARKAALTAAVMAATSGVSGKGGEGGGGGGGGGGGGGGEGGEGVVTE
VRHTTVYGDGENSSSSSSSGSSSGSRNAASCSQVSPTPTSINESTNTSYP
RKTTTSTVPVPPSIPPSPRPRAYVVSVKGDMFLSQGAYLTSLVSFLLEVA
RPQPGGDELILLLESGGGAAYEYGLASAQLEVRMGGRAGGEEGKGARWIR
VIVGVG*
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Synonyms
Publications