NO01G03450, NO01G03450 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G03450
Unique Name	NO01G03450
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3429
Alignment location	chr1:899507..902935 -

Link to JBrowse

Properties


Property Name	Value
Description	Transmembrane transporter protein, chloroquine resistant

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:899507..902935 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013936	CRT-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: KFG66177.1 (transmembrane protein, partial [Toxoplasma gondii RUB])

HSP 1 Score: 161.8 bits (408), Expect = 5.900e-36
Identity = 115/372 (30.91%), Postives = 174/372 (46.77%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSAWDDFVDRHKQRK 413
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A    + R  QR+
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA-GGIMKRRAQRR 701

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: EPR61234.1 (transmembrane protein [Toxoplasma gondii GT1])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_018635393.1 (transmembrane protein [Toxoplasma gondii ME49] >EPT25867.1 transmembrane protein [Toxoplasma gondii ME49] >ESS35176.1 transmembrane protein [Toxoplasma gondii VEG] >KFG37552.1 transmembrane protein [Toxoplasma gondii GAB2-2007-GAL-DOM2])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_013233234.1 (hypothetical protein, conserved [Eimeria tenella] >CDJ42484.1 hypothetical protein, conserved [Eimeria tenella])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 110/358 (30.73%), Postives = 176/358 (49.16%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFM-PRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGG--VPLKSIPQQFTLGFQCFRGINTL-----------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLY 399
            +K   + +K+ +Y      ++  N + FK+ML+   PN+  F NQ   F+++ + AA  ++ +   G         P      MG LD    I+S +GG +T+G  Q++L+Q+ IP+ L L    LG+++   Q LGA  I  G  +   P  + P K    DS++    +          LLF  SILP + S V KE  F    ++  +L   V+  Q  +GFV LP   LP  G   VPL  +  +   G +C  G +T+           P D C+ AW  +++YVL N ++NV  +L+ KH GAT+L +   + LP+T+ AF  P I+G+   P    D   L+++L+G L +
Sbjct:  222 IKTNERQLKVLLYTAGLLVSSTGNTIAFKRMLDK-MPNYSGFLNQLTNFVFIPVFAAFCLY-QYSVGKLSQEVLSFPKKNFALMGCLDGVCGIMSVVGGVHTSGTAQVVLSQLGIPVMLILCRFMLGKKYNAIQHLGAAVIIFGVLVVESPGLLHPSK---EDSSNIPFFN----------LLFLLSILPSSLSYVVKEIAFRGVQMNTSFLQFWVALFQFFVGFVLLPLTSLPLLGKEVVPLGELWNRLLDGGKCLIGTDTIVPPDCGFLTGVPCDSCQGAWIEVFVYVLFNLIYNVCSMLVLKHCGATVLFLVMTVRLPLTSMAFYSPLIVGDSAVPAKATDFFGLLILLVGLLAF 564

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: AIA26429.1 (chloroquine resistance transporter [Toxoplasma gondii])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: KFG49928.1 (transmembrane protein, partial [Toxoplasma gondii p89])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: KFG56184.1 (transmembrane protein [Toxoplasma gondii FOU])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: KFH09911.1 (transmembrane protein, partial [Toxoplasma gondii VAND])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: KFH17731.1 (transmembrane protein, partial [Toxoplasma gondii MAS])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFNGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVILRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

[Close]

BLAST of NO01G03450 vs. NCBI_GenBank
Match: CEL77632.1 (TPA: plasmodium falciparum Chloroquine resistance transporter domain-containing protein [Toxoplasma gondii VEG])

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-35
Identity = 112/360 (31.11%), Postives = 169/360 (46.94%), Query Frame = 0

Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+ ++     G       D P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S + L +RF  A  LGAL I +G  +  +P  +   +           DG     V   LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTVVFVPVFFALSLYTDYAGGLP-QEMADFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIVMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSS-----------DGGGDVFVFN-LLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGAGNMESPCDNCEGAWKYVGMYLSFNLLYNMFIIFVVKSGGAALTFLVSTLRLPVTALAFCSRAIMGDRAVPPKATDFYGLLVLILGLVIYRA 690

The following BLAST results are available for this feature:

BLAST of NO01G03450 vs. NCBI_GenBank

BLAST of NO01G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
KFG66177.1	5.900e-36	30.91	transmembrane protein, partial [Toxoplasma gondii ...	[more]
EPR61234.1	1.700e-35	31.11	transmembrane protein [Toxoplasma gondii GT1]	[more]
XP_018635393.1	1.700e-35	31.11	transmembrane protein [Toxoplasma gondii ME49] >EP...	[more]
XP_013233234.1	1.700e-35	30.73	hypothetical protein, conserved [Eimeria tenella] ...	[more]
AIA26429.1	1.700e-35	31.11	chloroquine resistance transporter [Toxoplasma gon...	[more]
KFG49928.1	1.700e-35	31.11	transmembrane protein, partial [Toxoplasma gondii ...	[more]
KFG56184.1	1.700e-35	31.11	transmembrane protein [Toxoplasma gondii FOU]	[more]
KFH09911.1	1.700e-35	31.11	transmembrane protein, partial [Toxoplasma gondii ...	[more]
KFH17731.1	1.700e-35	31.11	transmembrane protein, partial [Toxoplasma gondii ...	[more]
CEL77632.1	1.700e-35	31.11	TPA: plasmodium falciparum Chloroquine resistance ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL005	nonsL005	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007971	NSK007971	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G03450.1	NO01G03450.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668396	gene_347	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100029g27	gene1350	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G03450.1	NO01G03450.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G03450 ID=NO01G03450|Name=NO01G03450|organism=Nannochloropsis oceanica|type=gene|length=3429bp
TCTCCAAATTTTCGTTCCCCCCACAACCTTGCAACCGGCGCATCGGTCGT
AGCCTTGGCAACAAGGTTATGAGGCACAGGAGGGTGAAATTATTTCCGTC
AAACCTTTGTTGGTTTCATAGATTGCTTTACAATTCGTTGTTGTGACAAA
TGGGAAGAGGTAGGACTCCATTTCCACAGTCCATAAGACCTCAGCGCCCT
GGTCATTGGGTTCGATGTTTTGAACGGTACAGTGTCGGACTGCTTCGGCA
CGCGCCACAAAAAGCCTTCCTCTCAAATAAAAAAAGTCAAGTTGACCTCT
TGCCTCAAAGTGTCCCCCTCCCCCCTCCAACAATGATAATAGAAGGGCAC
GCATCCTTGAATCATTTTTTTAAATTGAATTTTCAGGCATTAACATGCGG
GGTCGGCGTCGGCCGACGGGGAAAAAAACAACGTTGAAGATGTGATGTAC
ACCATACCCAGTGTTCCACTGGTGGTGCTCAACCCAGCAGGCCTAGCCTA
CGTACCACAAAAACAACTCATAATCAACGCTTACAGACGCCACGGAACAT
TTTCAACACAAGGGGCATGATGGACATCCAAATCGAGCGGTGCGAGCGCT
TTTAGCATCATCCGTCGCCCTCGCGGCACACCATCTTCCACACGAAATGC
GCCCAGTGGCCAAGGGCTGCATGGCCTATTAGGAGAAGACCACGATAATG
GCATCGCAGCATTTGTCCTGACTGCTCTTTTTGGCTGACGGCACCATCTA
TTGAGGATGGCCAATACTGCCTGCTGCGCGCCGCTGCAATCCCCACAGGC
GGTGATAACCCTCCGATAGATGGCCCCCCACAGGAGACCAGCCCCGCGGA
ATGAGAAGCAAGAGTTCCACAGGCCTTTTAGACCACGGTGGACTATTTAT
GCCTGGTACTGGGCGCAAGCAATGGGCATGGCAGACCCCACCGTATTTAA
TTATAAATCTTCTCTCTCTCATCTATGCGTTGAAAGCAGCCCTTGTGTCT
TTTGCTTCGTGTAGAGCAAGATTTGAGTACAGTCGATATAGGTGGCAATA
ATTATGAACAAAACGCTTGCTTTCCTGTTGATCTCGAAAATGTGCCCACG
CTCCAATCCCAACATGCTCCACACACTCACTCAGTTGTTGGTAACTGTAT
TCCTGTCCACCATCCCACACCCCTTCCGTCATATATCCCCTTTATATCCC
CTTTACGTCCAACACACAGTACCGCAGCGGAAAATAGGACTATACTCGTT
TTGTGTCGTACACCCAGCACGTCATGGTGGATGAAGGAACGCCTCTGCGG
CTTTCGGTCTCGACGTCAACAACAACCGCCTCTAGCAGTAATACACCCGG
TGGTGGTGGAACGACCCCAACCCGTCGGCCCTCCTTTCTGACCAGTAAGC
CTCCACCCTCCCGCCCCGAGGAACCCGAGACGGCGGTCAAGAAAACGAGC
AAGGCGGTCAAGTTGGCTATATATGTCTTTGgtaggttttcaattttctt
caattcgtctctcgttcctgccgcttgcttctagcaacctcaacttttag
caccacgacccgacatatatcacgagctcggccgtttcggcataattaga
tctcttgttcatgaacctctcatcttgttttcggtctcattcattttcat
ctcactcttcttttctcctccacgctaaacacagCCTCGACATTCACCGC
GGCCGCTAACGCCGTCTGGTTCAAAAAAATGCTCAACGCCTATCGACCCA
ATTTCGAGTTTTTCGGGAACCAATTTAATGTCTTCCTCTACGTCCTCATG
GCCGCTGCCGTCGTTGTGCACAAGCGCCTCCGACACGGCGCACACTGGTG
GCACAAGCAAGACCTTCCCCTGAACGTGCTGTGTTTTATGGGTTTTCTAG
ACGCGACTGGTTCCATTCTGTCGACGATGGGCGGCGCCTACACAGCTGGG
GCGGTACAGATACTACTGAATCAAGTAATCATCCCCATGACGCTTGCCCT
ATCGTTCATTTTCCTTGGGCAACGCTTCACGGGCGCACAAACCCTTGGAG
CGCTCACCATTTTCATCGGCGCCGGCATCGCGGTTGTCCCTTCGTTTATG
CCCAGAAAGGCCAGGACTGCGGACAGCACTAGCAGCAGTGTTGTTGATGG
CCCTCCGACAAGCACGGTTACGGGAGTCTTGTTGTTTTTTTCTAGTATCT
TGCCCGGGGCCTTTTCCAACGTGTACAAAGAGTGGGGCTTCGCTCAATAC
CACGTTGACCTCTACTATCTCACCACCAGCGTCTCGGCTATCCAGGTGCT
TCTGGGTTTTGTGTTCTTGCCCGCTTTGCAGCTGCCGGCGTTTGGAGGAG
TGCCGTTGAAAAGCATACCACAGCAATTCACATTGGGGTTTCAATGTTTC
CGGGGGATAAACACCCTCCCCGGTGATGACTGCAAAGACGCCTGGAGCAC
CATGTGGATTTACGTCTTGGTCAATTTCCTGTTTAATGTGCTGCAGCTTT
TGATTACCAAGCATGGTGGGGCCACCTTGTTGGTGATCTCGGCGGCCTTG
GCGTTACCAGTGACTAACTTTGCGTTTTGCATGCCTTGGATTATGGGAGA
GGATACAGAACCTTTCAACCCTTATGATGCTGTCGCTCTTGTTGTGGTCC
TCCTCGGCTTCCTCTTATACAGCGCCTGGGATGATTTCGTGGACCGTCAC
AAACAGCGCAAGAGGCTGCCCATGCAATTTTCTGCTGGCTCGGTCATGTA
CATGCGGGAAAGGGCTGACTCGGATCCTTCTACACCTGGCTATACGCCTC
TTCGCGTTGAGCCACCCAAGCGTCGAGGTAGCATTGATTTACAAGTCAAT
CGATCGGCGACCAATGAGGGTGGGAGCAACGGGAATGGATTTGGGTCTCG
CTTATTGACGCCATCTAAAGCGATCCCGATTCTCTTGCAGCAGCAGCAGC
AGCGACGGCGGGGGGAGGCGCAGGGAGGGGTGGGAGTTGGGGGAGGCTAC
TCGTATCAAATAAATGTGGTGGGAGAGGTGGTTGGGACTGTAAGTATATA
GAAGACGAGAGACGAGGTAGAGCATGAGAAACGATGAGCGGTGGGAGGGA
GAGTAAAGTAGTTGATGGAAGAGAAAGAAACGTTGAATCCAAATTTTTGT
GAAATAAGAGATGACAGAGTGTGAGGATTTGTGTTTTCGTCCTCTTTAAA
TAAAGGCCGGGGATATTGTAGCGGCCCTCATCGCTCCCACAAAACAGATG
GCTTTTCATGTAAATAATGAAACTGAGTGAATGTAGTGAGAGTATGAGTG
AAAAAAGAGAAGGTAGGATGAGGAGAAGAAGGATCCAATACCGGTCTAAC
AGAGCCAAAGCAGCCTCGAGAATGAAATTTATAGTAAGAAGAGACCAATT
AAGAAAGAATGGATAACGAATTTAAAGCA

protein sequence of NO01G03450.1

>NO01G03450.1-protein ID=NO01G03450.1-protein|Name=NO01G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MVDEGTPLRLSVSTSTTTASSSNTPGGGGTTPTRRPSFLTSKPPPSRPEE
PETAVKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQF
NVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILST
MGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAG
IAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVY
KEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLKSIPQQ
FTLGFQCFRGINTLPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGAT
LLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA
WDDFVDRHKQRKRLPMQFSAGSVMYMRERADSDPSTPGYTPLRVEPPKRR
GSIDLQVNRSATNEGGSNGNGFGSRLLTPSKAIPILLQQQQQRRRGEAQG
GVGVGGGYSYQINVVGEVVGTVSI*

Synonyms

Publications