NO01G02360, NO01G02360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G02360 vs. NCBI_GenBank
Match: OQR95991.1 (hypothetical protein ACHHYP_17382 [Achlya hypogyna]) HSP 1 Score: 75.1 bits (183), Expect = 2.000e-9 Identity = 55/145 (37.93%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 1024 LAATLECRPWV--RSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQ-----FETPEVAQANVLAIARS 1162 LA L PWV S+KTI A IP+I +L T A V +DISFEG H G+A++ L+ LV PL LVLK + +RGL + GG+SSYAL+L+V LQ+ F+ Q N+ A+S Sbjct: 791 LARKLRSEPWVLPESVKTIPNASIPIITLL--------------TTAPYHVRLDISFEGPGHNGLATNDLVLSLV---HELPALTPLMLVLKTFVIERGLGVAYTGGLSSYALLLLVTRFLQEFHGGGFDASVATQCNLAVAAQS 918
BLAST of NO01G02360 vs. NCBI_GenBank
Match: KOO33900.1 (pap-associated domain-containing [Chrysochromulina sp. CCMP291]) HSP 1 Score: 74.7 bits (182), Expect = 2.600e-9 Identity = 52/132 (39.39%), Postives = 70/132 (53.03%), Query Frame = 0 Query: 1011 PPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVL 1143 PPG + L LA L RPW+ S+K I+TA +PVIK A + D+ + V +D+S E H G ++ RD+V P PL LVLK L++ R LN GG+SSYAL+LM A+L Sbjct: 294 PPGL-SAVAALRSLADRLAERPWIASIKLIETAKVPVIK-----ATMTISGDARALCPDSFVHLDVSVESHDHTGGMTTTYTRDVVCAKLPC--LAPLVLVLKQLLSSRRLNNAASGGLSSYALVLMAAALL 417
BLAST of NO01G02360 vs. NCBI_GenBank
Match: OQR88873.1 (hypothetical protein THRCLA_10051 [Thraustotheca clavata]) HSP 1 Score: 73.9 bits (180), Expect = 4.500e-9 Identity = 52/134 (38.81%), Postives = 68/134 (50.75%), Query Frame = 0 Query: 1024 LAATLECRPWV--RSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANV 1156 LA L WV S+KTI A IP+I +L T + V +DISFEG H G+A++ L+ LV PL LVLK + +RGL + GG+SSYAL+L+V LQ+F P A V Sbjct: 795 LARRLRTESWVVPESVKTIPNASIPIITLL--------------TTSPYNVRLDISFEGPGHNGLATNDLVHSLV---HELPALTPLMLVLKTFIIERGLGVAYTGGLSSYALLLLVTRFLQEFHPPGGYDATV 911
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_008875065.1 (hypothetical protein H310_10446 [Aphanomyces invadans] >ETV96273.1 hypothetical protein H310_10446 [Aphanomyces invadans]) HSP 1 Score: 72.4 bits (176), Expect = 1.300e-8 Identity = 50/125 (40.00%), Postives = 64/125 (51.20%), Query Frame = 0 Query: 1024 LAATLECRPWV--RSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147 LA L WV S+KTI A IP+I +L T A V +DISFEG H G+A++ L+ + PL LVLK + RGL + GG+SSYAL+LMV LQ+FE Sbjct: 837 LARKLRSESWVVPESVKTIPNASIPIITLL--------------TTAPYHVRLDISFEGPGHNGLATNDLVHSFL---HELPALAPLMLVLKTFIIDRGLGVAYTGGLSSYALLLMVTRFLQEFE 944
BLAST of NO01G02360 vs. NCBI_GenBank
Match: OQR92771.1 (PAP-associated domain-containing protein 5-like [Achlya hypogyna]) HSP 1 Score: 72.4 bits (176), Expect = 1.300e-8 Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 0 Query: 1024 LAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVA--PGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147 LA+ L PWV++++ I+ IP++K+ VP S A ++ +DISF+ QH G+ + + ++ LVA P P PL LVLK L+ + GLN + GG+SSY L +M+ +VL + Sbjct: 538 LASLLRHEPWVQAIQVIERTTIPLVKV-----TTAAVPTSC-GGAQGVIQLDISFDQPQHRGVETCVFVQRLVAVLPELP-----PLMLVLKQLLLEHGLNDSYTGGLSSYGLTIMLASVLNPLQ 651
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GAX96612.1 (Hypothetical protein PINS_004474 [Pythium insidiosum]) HSP 1 Score: 72.0 bits (175), Expect = 1.700e-8 Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0 Query: 1017 STRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYA----HAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVL 1143 + + L QLA LE + WV S+ +DTA IPV+K++ A + VP+DI+FE S LL RDL+ + YA PL +V K L+ +R LN + GG+SSY+++LM+I L Sbjct: 260 TVKCLRQLARALESQAWVESIVVLDTAKIPVLKLVT---------------AESTVPIDITFEST---ATHSGLLARDLI---KRYATEMPEXYPLAVVFKQLLRERDLNDAYTGGLSSYSIVLMIIHFL 368
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_009517098.1 (hypothetical protein PHYSODRAFT_466551 [Phytophthora sojae] >EGZ29823.1 hypothetical protein PHYSODRAFT_466551 [Phytophthora sojae]) HSP 1 Score: 71.6 bits (174), Expect = 2.200e-8 Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 0 Query: 1021 LYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLV---APGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQ-------FETPEVAQANVLAIARSVDTIKRRAI 1171 L +LA LE + WV SL +DTA +PV+K+++ A VP+DI+FE S LL RDL+ A P + PL +V K L+ +R LN + GG+SSY+++LM+I Q FE + + L A SV K +A+ Sbjct: 240 LKELAKVLEKKKWVESLLVLDTAKVPVLKLVS---------------AETSVPIDITFES---AATHSGLLARDLIKRYADNMPELY--PLAIVFKQLLRERDLNDAYTGGLSSYSVVLMIIHFSQLWRNGESCFEAASIYASGSLPPAPSVLAAKNQAL 379
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_004353585.1 (nucleotidyltransferase domain containing protein [Acanthamoeba castellanii str. Neff] >ELR24057.1 nucleotidyltransferase domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 71.6 bits (174), Expect = 2.200e-8 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 0 Query: 1024 LAATLECRPWVRSLKTIDTAFIPVIKILA---DPAVLMGVPDSLPTPATALVPV---------DISFEGR----------QHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVA 1152 L L WV SL+ IDTA +PVIK++ +LM V S + P+ D+ F +H GIA+S L+R + R PL LVLK +++RGLN + GG+SSY L+LM++A L+ + P V+ Sbjct: 1318 LVEELRKHDWVHSLQFIDTAKVPVIKLMTVADGHTILMDVTFSFSNSTSTSSPLHASTAESLADLPFNPTSLLRSNASTFEHSGIAASHLVRSYI---RSLPALTPLALVLKQFLSERGLNNTYTGGLSSYCLVLMIVAFLRINKVPTVS 1464
BLAST of NO01G02360 vs. NCBI_GenBank
Match: ETI33892.1 (hypothetical protein F443_19491 [Phytophthora parasitica P1569] >ETM34112.1 hypothetical protein L914_18730 [Phytophthora parasitica]) HSP 1 Score: 71.6 bits (174), Expect = 2.200e-8 Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 0 Query: 1021 LYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLV---APGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPS 1176 L QLA LE + WV SL +DTA +PV+K+++ A VP+DI+FE S LL RDL+ A P + PL +V K L+ +R LN + GG+SSY+++LM+I Q + ++ + ++PP PS Sbjct: 223 LRQLAKVLEKKKWVESLLCLDTAKVPVLKLVS---------------AETSVPIDITFES---AATHSGLLARDLIKRYADNMPELY--PLAIVFKQLLRERDLNDAYTGGLSSYSVVLMIIHFSQLWRNGDLC-------FEAASIYASGSLPPAPS 353
BLAST of NO01G02360 vs. NCBI_GenBank
Match: ETK74251.1 (hypothetical protein L915_18910 [Phytophthora parasitica] >ETL80931.1 hypothetical protein L917_18632 [Phytophthora parasitica]) HSP 1 Score: 71.6 bits (174), Expect = 2.200e-8 Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 0 Query: 1021 LYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLV---APGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPS 1176 L QLA LE + WV SL +DTA +PV+K+++ A VP+DI+FE S LL RDL+ A P + PL +V K L+ +R LN + GG+SSY+++LM+I Q + ++ + ++PP PS Sbjct: 223 LRQLAKVLEKKKWVESLLCLDTAKVPVLKLVS---------------AETSVPIDITFES---AATHSGLLARDLIKRYADNMPELY--PLAIVFKQLLRERDLNDAYTGGLSSYSVVLMIIHFSQLWRNGDLC-------FEAASIYASGSLPPAPS 353 The following BLAST results are available for this feature:
BLAST of NO01G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02360 ID=NO01G02360|Name=NO01G02360|organism=Nannochloropsis oceanica|type=gene|length=4410bpback to top protein sequence of NO01G02360.1 >NO01G02360.1-protein ID=NO01G02360.1-protein|Name=NO01G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1470bpback to top Synonyms
Publications
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