NO01G02360, NO01G02360 (gene) Nannochloropsis oceanica

Overview
NameNO01G02360
Unique NameNO01G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4410
Alignment locationchr1:607810..612219 -

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Properties
Property NameValue
DescriptionPoly rna polymerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:607810..612219 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_005856305.1 (poly rna polymerase, partial [Nannochloropsis gaditana CCMP526] >EKU20055.1 poly rna polymerase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 612.1 bits (1577), Expect = 4.600e-171
Identity = 438/788 (55.58%), Postives = 500/788 (63.45%), Query Frame = 0
Query:  696 DGRKEWGENCGHHMPHRYSAAVIPQVSLYDCLNRHQRHHHDNPQLQHQQRAPHRHVGGDGGRSGSSTMDGGVYESVMPPPLVMQQAHEVYALDLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANT-------TPQMTR------HLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSL-PTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVTIPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPPPLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHGIEMGRRILQAPAAEDGWSHVGGXXXXXXXXXXXXXXXXXXQWQGQAPMNPVPLPPTADVLSLMLSY 1470
            DG   W E   H +  +Y     P +        H ++ H    LQ Q+R   +    DG   G++T   G +ESV+PPPLV+QQ HE+YALD+EAE+A  AY QGIDAMR+ L++NIA FM  RE  M  HRAARE +L E+R+IIQ LW+G+RVELYGSCFTGLDL+SSD+D+VVCGL   G+ +         TPQM+R            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       GSR                                  LPPGH ES RLLYQLA  LE R W+RS+KTIDTAF+PVIKILADPA L    +SL P  AT LVPVDIS EG QHGGIASSLLIRDLV PG+PYAHAVPLTLVLKAL+ QRGLNQPWCGG+SSYALMLMVI VLQQFE PE AQANV+AIARSVD IKRR +    S+                    + S+           K S+R  +S N   +G MDYGKA+RG    LE+ V       EV+PPPPLV GGYGSPAE+SYRLWSQFAAAQ TS+G M + ++ G       + NS    + +GFLLTYFLEY+GRIFNPQ EGIAVDQGYGLTFPL +F    GLPVVADPLTILDPLDRAVNVSRCAFRIGEIQ LFQQCL +LE  G+EM R +L  PA ED WSHVG                   Q Q     + VP P   DVLSL+L Y
Sbjct:  890 DGSDGWKECNDHRVVFQY-----PLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDG--YGTTT---GDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTLVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHSISSK---------EGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQ-TSEGRMAEGHEAG-----KQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGS---GGGVGKRKKSKGTNGQRQPTNSTSSVPTPKN-DVLSLILGY 1647          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: EWM29150.1 (poly rna polymerase [Nannochloropsis gaditana])

HSP 1 Score: 611.7 bits (1576), Expect = 6.000e-171
Identity = 440/793 (55.49%), Postives = 503/793 (63.43%), Query Frame = 0
Query:  696 DGRKEWGENCGHHMPHRYSAAVIPQVSLYDCLNRHQRHHHDNPQLQHQQRAPHRHVGGDGGRSGSSTMDGGVYESVMPPPLVMQQAHEVYALDLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANT-------TPQMTR------HLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSL-PTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVT-----IPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPPPLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHGIEMGRRILQAPAAEDGWSHVGGXXXXXXXXXXXXXXXXXXQWQGQAPMNPVPLPPTADVLSLMLSY 1470
            DG   W E   H +  +Y     P +        H ++ H    LQ Q+R   +    DG   G++T   G +ESV+PPPLV+QQ HE+YALD+EAE+A  AY QGIDAMR+ L++NIA FM  RE  M  HRAARE +L E+R+IIQ LW+G+RVELYGSCFTGLDL+SSD+D+VVCGL   G+ +         TPQM+R            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       GSR                                  LPPGH ES RLLYQLA  LE R W+RS+KTIDTAF+PVIKILADPA L    +SL P  AT  VPVDIS EG QHGGIASSLLIRDLV PG+PYAHAVPLTLVLKAL+ QRGLNQPWCGG+SSYALMLMVI VLQQFE PE AQANV+AIARSVD IKRR +    S+                     R+  +G       IP+   K S+R  +S N   +G MDYGKA+RG    LE+ V       EV+PPPPLV GGYGSPAE+SYRLWSQFAAAQ TS+G M + ++ G       + NS    + +GFLLTYFLEY+GRIFNPQ EGIAVDQGYGLTFPL +F    GLPVVADPLTILDPLDRAVNVSRCAFRIGEIQ LFQQCL +LE  G+EM R +L  PA ED WSHVG                   Q Q     + VP P   DVLSL+L Y
Sbjct: 1168 DGSDGWKECNDHRVVFQY-----PLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDG--YGTTT---GDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSD--------------EKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQ-TSEGRMAEGHEAG-----KQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGS--GGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKN-DVLSLILGY 1926          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: CBJ27910.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 123.2 bits (308), Expect = 6.500e-24
Identity = 103/343 (30.03%), Postives = 140/343 (40.82%), Query Frame = 0
Query:  816 FMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAV----------LMGVPDSLPTPATAL--VPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147
            FM K    M+  R A   V+  +R ++ G+W  ARVE+YGSCFTGL+L SSDVD+VVCG++                                                                                           + +  GSR                  A  SS+                ++   L +LA  L+ + WVR +K I+TA +PVIKILADP                 D      + L  +P+DISFE  QHGGIASS  +RD +  G+ Y  A+P  +VLK ++ QRGLNQPW GG+SSY+L+ M+I VLQ+ E
Sbjct: 1430 FMQKLGRAMRPRRRAWSQVIARVRELVSGIWKEARVEMYGSCFTGLELPSSDVDVVVCGIN-----------------------------------------------------------------------------------------GLKYSYGGSR------------------AGYSSM----------------QTVANLQKLANVLQEQTWVRGMKVIETAAVPVIKILADPVSNGNGQFMFDDSRNGRDGWLGGGSGLDYIPLDISFESPQHGGIASSKWVRDCIQGGK-YGFALPAVMVLKEILCQRGLNQPWSGGLSSYSLINMMITVLQRAE 1648          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_009037116.1 (hypothetical protein AURANDRAFT_64151 [Aureococcus anophagefferens] >EGB08400.1 hypothetical protein AURANDRAFT_64151 [Aureococcus anophagefferens])

HSP 1 Score: 106.3 bits (264), Expect = 8.200e-19
Identity = 198/731 (27.09%), Postives = 258/731 (35.29%), Query Frame = 0
Query:  804 AMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSL--TGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPA-------------------------------------------------GSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVP---------------------------DSLPTPAT------------------------------------------------ALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVTIPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPP-----PLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHG 1404
            AMR+ L  +   F+A  E  M   R AR  VL E+  +++ +WS A   LYGSC TGLDL SSDVD+VV GL+   T +     P+         XXXXXXXXXXXXXXXXXXX                              XXXX                    +PA                                                 G   P   +      L PA       +   + TPP    PG   S +    LAA L   PWVR LK I+TA IPVIK+LADP+VL G P                             LP P T                                                 L+ VDISFE   HGG+ASS    + ++    +    PL LVLK L+ QRGLN+P+ GG+SSY+L+L+V+  L Q                         + P+                                +P  R  T         P+ D P    +A      P + P +       ++  P     PL  GG  +       L S+          G E R               +K     G+LLT+FLE+FGR F+PQ   ++V +G      +A          VA PL I DPL+ + NV+R  F I +IQ +F  CL  LE+ G
Sbjct:  583 AMRSRLAYDANDFVASLERAMAPQRRARTAVLDEVSQVVRSIWSHAECSLYGSCLTGLDLPSSDVDVVVRGLNCDPTPNPPGAAPRRADAXXXXXXXXXXXXXXXXXXXXXXXXGDRGNGARRQATPPKAAAPRLPRIDSGEAVXXXXXXXXXXXXXXXXXXXXXRPDSPARLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGHKP---NYVGQQFLPPAQCYGQFPVYMRAPTPPTGPNPGVVLSVK---TLAAALADLPWVRELKAIETANIPVIKLLADPSVL-GCPLPEFKRNRRRACSEDAAQALAETASPCGDLPLPDTRRRPQAVAGDAAXXXXXXXXXXXXAETVDAGPGEAAPTWCGAVGRCDAGLLAVDISFEAPDHGGLASSRYALEAMS---RWPELAPLMLVLKELLVQRGLNEPFTGGLSSYSLLLLVMTALLQ-----------------------AGVEPLED-----------------------------PLPEPRHMT---------PLEDRP--EAEAPEEPPKPAKPPTSVREAWARLRDDPRRAKAPLRDGGSAAGGRRRPSLASRIRGGDALLWNGAESR------------AAFDKDDDALGYLLTFFLEFFGRHFDPQRHAVSVLRGDAGIIAMAGPGYADANQWVA-PL-IEDPLECSRNVARSCFAIAQIQNVFAHCLCILESKG 1226          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_002289351.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92888.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 93.2 bits (230), Expect = 7.200e-15
Identity = 154/409 (37.65%), Postives = 207/409 (50.61%), Query Frame = 0
Query:  809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGA-RVELYGSCFTGLDLVSSDVDIVVCGL------------SLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLY------------------QLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGV-------------------------------PDSLPTPATA-----LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVP---LTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQ 1144
            L++ I TFM +R   +   R  R  VL  L+  +  +W G+  VE+YGSC T LDL SSD+D+VVCGL            S+  S +N+ P + +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXX               V       G  SP     + S ++       + S + ++        P +  + +  Y                  +LA  LE +PW   +K I TA +PV+K+LADP+ L GV                               P S+PT   A     L P+DI+FEG +HGGI     S+ +++D          + P   + +VLK L+ QR LN+P+ GG+SSYAL+L+++AVL+
Sbjct:  926 LSEEINTFMYRRSLALDIRRKERSAVLSALQDTLGRIWPGSCHVEMYGSCATELDLPSSDLDLVVCGLDDINMMHIPMDNSIPNSPSNSGPNLMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXLEELEVGHE----GEASPRHPDDSPSEQIDAEDMMYDESGMDVNMMGMEQYSPDYHVNQQEFYYVPYNYVSPMALNAQRVLRLAHELEMQPWAVQVKAIPTATVPVVKMLADPSRLPGVAGSGGNWMEQHIAAQAGVPPADQMKPSHFFPPHSMPTWRGADIMNGLQPIDITFEGPEHGGIGSTTYSACVVQDACKETNLPPESTPVVQVAMVLKELLAQRRLNEPFSGGLSSYALLLLLLAVLK 1330          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: OEU22639.1 (hypothetical protein FRACYDRAFT_232797 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 92.4 bits (228), Expect = 1.200e-14
Identity = 124/414 (29.95%), Postives = 171/414 (41.30%), Query Frame = 0
Query:  788 DLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSG-ARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGV------------------PDSLP---------------------------------TPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVP-------LTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVL 1143
            +L  +  +   C  +D    L T+ I+ FM +REA ++  R  R +VL  L   +  +W G   VE+YGSC T LDL SSD+D+VVCGL              R LE                                      XXXXXXXXXXXXXXXX   +   S++ D +             +   L    S   L P  S    S   MS    + +      +   + +LA  LE +PW   +K I TA +PVIKILADPA L G                   P S+P                                      L+ VDI+FEG +HGGI S++  + +V          P       + +VLK L+ QR LN+P+ GG+SSYAL+L+VI+++
Sbjct: 1059 NLSRQSENDVGCHLLDVCDRLSTE-ISEFMKRREAALEIRRHERGLVLAALEKTLGLIWPGMPSVEMYGSCATNLDLPSSDLDVVVCGLD-------------RPLE----------------------------------AIPSXXXXXXXXXXXXXXXXPKSVGDSSKVEDDA------------HKEEGLPEIDSHHDLSPYGSDQRYSSHQMSPHHMQMMYGHMSMNAERVLRLAMELEHQPWAVHVKAIPTASVPVIKILADPARLQGAILNGSADWLVQQPMNGQSPTSMPPHGRSDNVDSHSGNQAPKSHYSSQQSSPLWRGADVVNGLLKVDITFEGPEHGGIGSTVFSKQVVQDFSNETELSPECTPHVQVLMVLKELLAQRRLNEPFSGGLSSYALLLLVISMI 1412          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GAX09922.1 (hypothetical protein FisN_11Lh093 [Fistulifera solaris])

HSP 1 Score: 91.3 bits (225), Expect = 2.700e-14
Identity = 98/394 (24.87%), Postives = 156/394 (39.59%), Query Frame = 0
Query:  809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDS---------LPTPATA---------------------------------------LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVPL---TLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147
            L+ ++  FM++R   +   R  R  +L  L+ ++  +W +   VE+YGSC T LDL SSD+D+V+ GL  T +                                                                      IH+   + +  SS +  +  P      ++++ + +  L P        +    +  P PL      + R+L +LAA LE +PW   +  I TA +PV+K+L DP+ L+G   S         L T A A                                       L+ +DI+FEG +HGGI     S+ ++ D          A PL    +VLK L+ QR LN+P+ GG+SSYAL+L+V+A+L++ E
Sbjct:  827 LSRDMCLFMSRRALALGARRRERGAILYALQDVLSKIWPNSCHVEMYGSCATQLDLPSSDLDVVIMGLDRTQNMI--------------------------------------------------------------------IHAAPPIPEIPSSPLVHKVRPV---KASMNATSGTSNLKPQALVKQHQVPSYPSFIPLPL---QSNADRVL-RLAAELELQPWAVQVNAIPTASVPVVKVLCDPSRLVGGTISGDWMTHHQHLATDAAAAAGQSLKDVNKDKDSRSKQQLHSPPQPMLSWRGSDVMNGLLKLDITFEGPEHGGIGSTQFSARVVNDACLQANVAPDATPLVQVVMVLKELLVQRKLNEPYSGGLSSYALLLLVVALLRERE 1145          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_002176959.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51422.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 87.4 bits (215), Expect = 4.000e-13
Identity = 103/407 (25.31%), Postives = 152/407 (37.35%), Query Frame = 0
Query:  809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLS-LTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVP------DSLPTPA----------------------------TALVPVDISFEGRQHGGIASS-LLIR---------DLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQ-----FETPEVAQANVLAIARSVDT 1165
            L+ ++  FM++R   +   R  R  +LG L+  +  LW +  +VELYGSC T LDL SSD+D+VV GL    G+      Q    L+ +                                                              SD     V  +                                 ++A+ P  +P     +   + +LAA L  +PW   +K I TA +PV+K+LADP  L  V       D  P  A                              L+  DI+FEG +HGGI S+   IR          L   G P+   V + +VLK L+ QR LN+P+ GG+SSYAL+L+V+++L++      E   V Q      A ++DT
Sbjct:  872 LSQDMRLFMSRRSQALNARRKERVALLGALQNSVAKLWPASCQVELYGSCATHLDLPSSDLDVVVVGLDRRRGTLMQVGTQNNGCLDGK----------------------------------------------------------MESKSDFDVDDVRQK--------------------------------ILNASLPPYIPTSTSLNAERIKRLAAELATQPWAVQVKAIPTASVPVVKVLADPYRLQNVSGNDWKLDKHPKIAAETSKVSQVSSDSARLQSFQPWRGADAMNGLLSFDITFEGPEHGGIGSTEFSIRTVNEACRETGLPPEGTPF---VQVIMVLKELLAQRKLNEPYSGGLSSYALLLLVVSLLRERTVIREELDRVEQQRQAVAADTMDT 1185          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GAX14448.1 (hypothetical protein FisN_11Hh093 [Fistulifera solaris])

HSP 1 Score: 76.3 bits (186), Expect = 9.100e-10
Identity = 98/397 (24.69%), Postives = 148/397 (37.28%), Query Frame = 0
Query:  809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRP--LP-PGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDS---------LPTPATA---------------------------------------LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVPL---TLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147
            L+ ++  FM++R   +   R  R  +L  L+ ++  +W +   VE+YGSC T LDL SSD+D+V+ GL  T +                                                                      IH+   +                          +   L P   A    +      PP P  +P P    + R+L +LAA LE +PW   +  I TA +PV+K+L DP+ L+G   S         L T A A                                       L+ +DI+FEG +HGGI     S+ ++ D          A PL    +VLK L+ QR LN+P+ GG+SSYAL+L+V+A+L++ E
Sbjct:  850 LSRDMCLFMSRRALALGARRRERGAILYALQDVLSKIWPNSCHVEMYGSCATQLDLPSSDLDVVIMGLDRTQNMM--------------------------------------------------------------------IHAAPPMXXXXXXXXXXXXXXXXXXXXXXXXXXN---LKPQAPAKQHQV------PPYPSFIPLPIQSNADRVL-RLAAELELQPWAVQVNAIPTASVPVVKVLCDPSRLVGGTISGDWMAHHQHLATDAAAAAGQSLKDGIKDKDSRSKQQLHSPPQPLLSWRGSDVMNGLLKLDITFEGPEHGGIGSTQFSARVVNDACLQANVAPDATPLVQVVMVLKELLVQRKLNEPYSGGLSSYALLLLVVALLRERE 1168          
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GBG32713.1 (PolyA RNA polymerase cid14 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 75.9 bits (185), Expect = 1.200e-9
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 0
Query: 1024 LAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQF 1146
            LA  L  + WV+ +++++   +PVIK+         +P S      +L+ VDI+F+   H G+ +  L+R L+A    Y    PLTLV+K  +  +GLN P+ GG+SSY L+LMV A+LQ++
Sbjct:  736 LADHLRGQSWVQMIQSVEHTSVPVIKL-----ATAQIPISFGNQG-SLINVDITFDSYSHTGLRTCALVRRLMA---SYPPLKPLTLVIKQFLVVKGLNDPFVGGLSSYGLVLMVTAILQRW 848          
The following BLAST results are available for this feature:
BLAST of NO01G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856305.14.600e-17155.58poly rna polymerase, partial [Nannochloropsis gadi... [more]
EWM29150.16.000e-17155.49poly rna polymerase [Nannochloropsis gaditana][more]
CBJ27910.16.500e-2430.03conserved unknown protein [Ectocarpus siliculosus][more]
XP_009037116.18.200e-1927.09hypothetical protein AURANDRAFT_64151 [Aureococcus... [more]
XP_002289351.17.200e-1537.65predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU22639.11.200e-1429.95hypothetical protein FRACYDRAFT_232797 [Fragilario... [more]
GAX09922.12.700e-1424.87hypothetical protein FisN_11Lh093 [Fistulifera sol... [more]
XP_002176959.14.000e-1325.31predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX14448.19.100e-1024.69hypothetical protein FisN_11Hh093 [Fistulifera sol... [more]
GBG32713.11.200e-936.89PolyA RNA polymerase cid14 [Aurantiochytrium sp. F... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008079NSK008079Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02360.1NO01G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100007g88gene1441Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02360.1NO01G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02360 ID=NO01G02360|Name=NO01G02360|organism=Nannochloropsis oceanica|type=gene|length=4410bp
ATGGCTGTGGCAAAAACAGAGAAGGAGGCTGTCAGGAGCGATGGGGAGGA
CGAGAAGACTGTAGAACTGGCTGCTGTGCAAAGCAACGGCGCCGATGATG
AGACAGTAGGGATTGAGGCAGCGAAGAAGAAGATGAAGCAGAAAAAGAAA
AAAAAGAAGGCGGCCGCAGTTGAGGGTGTAGAGAGCACAAAACAAGAGGA
GGTTGATATGTCGACAACCCCAGTGATGGGAAGGGAGAGGTCCATGGTGG
TAGTGAAAGAGCCGGCAGCAGGAGGAGTAGCGGCAGCAGGAGCAGGAGCA
GCAAGTGCTTTATTTTCTACTTCACCGTTACCCCTGCCGCCCCCCCTCAC
CTCCTCAGTTCTCATTCCAGTGGCTCCGTTTCTTCCCCCCGCTTCCGATC
CTCCCAAGATCTTTCCCATCACCACCCTCTCCTCCTCCTCACTCACGGAC
TCCGTGCCGGCGCTCGTGCCTACTATTTCTGCTCCTACTGTCGTCAGCAT
CAGCAGCAGCACTGCACTTGCTGCGGGCCTCGCTGAACCAGGCTTGCCTC
CGTCCGCGCCTCTCTGCAGTATAGGAGGAGGGGGAAAGAAAAATACAGAA
TGGGAAGGACGGATTAAGGACCGTCAGCATCATCAGGGCGCAGAGGGAGG
AAGGGGAGTTATAAAAGCAGAAGCAGCTGTCGCACCATCAGGTAGAACAC
GAGGAATAGGTGGTGAAGTTGAGGTGGGGAGGGGGGGGTTGGTAGCTCTG
AAGCCACCGGAAGTGCCTGAAATTGTGGTCGGGGAAATTCGTAGACGGCC
GAAGAGTAAGATCCGGAGCCAGTATAAGAACCGGCGGAAGATGCGGGAGG
TGATTGCCGCTATTATGGCGGGTGTGCTGGACCGGGTGGATCTAGTGGTG
AGTGGGGCGCAACCTCTGCCAACGGAGGTAGAGGGGCCGCCGGGGACAAA
GACGACGACGACGATGGCAAGGGAAGAGATGGTGGAGGAGAAGGTGAAGC
AGGGGCCGTCGGAGCTCCCGCTGTCCAAGGAGCAGCCACAATCAGTGAAT
GTGAAGACGAAGACCGAGGAACGACCGCATCAGGCTCCGTTGCAGCCGGA
GTCTGTGTATAAGAAGGAGACAGAGCAAAGGCCGACGCGGGCGCAGCAGC
AGCAGCAAAATCACCAGCTGAAGTTGCAGGGAGAAATGCAAGTAGAGCAG
CAGCAGAAGCAGCAGCAACCGCAACCACAACCGCAACCACAACCGCAGCT
CCAGCAAATAGCTGCGCAGCAAGAAGGAGACGTCCAGGAGATCAGTAAGG
TTACAAATGTCAACGCGAACCCCAAGCCTAGCAAGCAACAGCAGCAGCAA
CAGCAGCAGCAGCGGGAATCGCCGTCGGCACGTCTGGTATCACTTTCGTA
TCAAAAACAAAACCCTTCTCTTACCTCTCCTCCGTCCTCCTTTTCATTTC
CCTCTTCTTCTAGCTATGGGAACGGTACCAAGGTACAAGCAGCGCCTCAG
AAGCAGGTTCAGCAGTTGACTACTAAGAAGCAGCGACAGCAAGAGCAGCA
ACAACATAAAAGAAAGCAGCAACTTCAAGAACACCAACAACCACAACAGC
AACAGCAGCAACAGAAGCAGCAACAGGAAAAAGTCAAATTTCTTTCCGCC
TACGCTCAACCTCAGCTGGCTGCAAAGCAGAAGTACAATTCCAAAGATAC
CGGCGGCCGCACCACCACCACCACCGCCACCACCACCCGTAGTGTCACCA
GCGGCAGCGTCGCCATCAACGATGGACGTCCCCCTCTCCAGCTTGGCCCG
CAATACGTGCAGCCTATATATCAAACTGGAGGTGTTGGCTGCCCGGCAAG
GAAGGGGCGAAAGGGAGGAGGAGAAAGTAGTGGTGGAGGTGATGGAGGTA
GAGCAAGTGGTGGCGGCCATATATTCCAATCGACCCGTCAACCGCTTTAT
TCACGTCTCCACCAGCAGCATCATACTCCTCAGTATTACCAAGAGTACCC
GAGCGCGCATGGTGGAGGGGCAGAGTTAGGCGGATCGATGGTCGGAGGAG
GCGGCGGCGGACGGCGAGGAACAATTCAGCGCCTGGACGGTCGGAAGGAG
TGGGGCGAGAATTGTGGGCATCATATGCCGCACCGGTATTCAGCCGCTGT
GATTCCGCAGGTCTCGCTTTATGACTGCCTCAATCGCCATCAGCGGCACC
ACCATGACAACCCGCAGCTACAGCACCAGCAACGGGCGCCGCACAGGCAT
GTTGGCGGCGATGGTGGCCGAAGTGGCAGCAGCACCATGGACGGCGGGGT
TTATGAGTCTGTGATGCCGCCCCCGTTGGTTATGCAGCAGGCTCACGAGG
TATACGCGCTAGACTTGGAGGCGGAGAAGGCGCATCATGCCTACTGCCAA
GGGATCGATGCGATGCGAGCCTTACTGACGGATAATATCGCCACCTTCAT
GGCCAAGCGAGAGGCGGACATGAAGACTCATCGAGCGGCACGGGAAATGG
TACTGGGAGAGTTGCGCACCATTATTCAGGGCTTGTGGAGCGGGGCCCGT
GTAGAATTGTATGGCTCCTGCTTCACGGGCCTGGACTTGGTTTCCAGCGA
TGTGGACATTGTCGTTTGCGGGCTTAGTCTGACGGGCTCCACGGCCAACA
CTACCCCGCAGATGACCCGGCATCTGGAGCAGCGGCACAACGAGTCCACG
GCTTCGTCTTCTCCAGATGGAGGTTACAGTGTGGCCACCACCATCAGCAG
TGGCAGCGGCAGCAGCAGCAGCAGGGCCTCCACCACCGTCGCGACTGGGC
CTTCGAGCGCCGCCTCGTCCGTTGTAGATGAAGAGGAGGAAGAGACAGAT
ATCCACAGCCACAGCCAGCTCAGTGACACGAGCAGTAGCAGTGTCGCGAC
CAGGTCCACCCCGGCTGGTTCCCGATCCCCTGCGCTCTCCTCCCCCGCCT
CCTCCCCGCGCCTGGGACCCGCCACTAGTGCTTCCAATAGCAGCATCATA
TTTATGTCAGCCACGCCGCCCCGCCCCTTGCCTCCCGGGCATGGCGAATC
GACGCGGCTTTTGTACCAGCTGGCTGCCACCTTGGAATGTCGGCCGTGGG
TGCGCTCGCTTAAGACCATCGATACAGCATTCATCCCTGTAATCAAGATC
CTTGCTGACCCGGCCGTGCTTATGGGCGTGCCGGATTCACTTCCAACGCC
CGCAACTGCGTTGGTGCCGGTCGACATTTCTTTCGAGGGCCGGCAGCACG
GGGGTATTGCCAGTTCACTCCTCATAAGGGATCTGGTGGCACCCGGTAGG
CCCTACGCGCACGCCGTGCCCTTGACGTTGGTGCTGAAGGCACTAATGAC
GCAGCGAGGCCTGAACCAGCCCTGGTGCGGTGGCGTGTCATCATACGCGC
TCATGCTCATGGTAATCGCCGTTCTGCAACAGTTTGAGACGCCTGAGGTA
GCGCAGGCCAACGTCCTAGCCATAGCCCGTTCTGTCGATACCATCAAACG
CCGTGCTATCCCTCCGGTGCCTAGCAACAGCAGTAGCTGCAATGCTGGCT
GTAGGGGGAGTGGTGGGAGTGGGAGCAGCGGCAGCGACGTCAGGAGCCGG
AGCAAGGGTGTAACGATTCCTGCAGACAGGGACAAGACGAGTAGGCGATT
GCATTCGTCTGGCAACCCTGTACCGGACGGCCCCATGGATTATGGCAAGG
CCTTGCGTGGAGGCAATGGGCCCCTCGAGGAACCGGTTACGGCGGAAACG
ACGCTGATGGAGGTGAAGCCACCCCCGCCGCTTGTCAAAGGCGGGTACGG
TAGCCCGGCCGAGATCTCCTACCGGCTCTGGTCTCAGTTCGCGGCGGCGC
AGATGACGTCGGATGGCGGTATGGAGGACAGAAATGATGGCGGGGGCAAG
GGGGTGGAAAGTGCGGATGGGAATTCCGAGAAGAAGGGAATGACCTCAGG
TTTTTTGCTTACGTACTTTCTGGAGTACTTTGGGCGGATTTTCAACCCTC
AAGTCGAGGGCATCGCGGTGGACCAGGGCTATGGCCTGACCTTCCCCCTG
GCCGACTTTTTTCTGACGCATGGCTTGCCTGTGGTGGCCGACCCACTCAC
AATTCTTGACCCCTTGGATCGAGCGGTGAACGTCTCACGTTGTGCTTTCC
GGATAGGGGAGATCCAGGTCTTATTCCAGCAATGTCTGGCCTCGCTCGAG
GCTCATGGCATTGAGATGGGGCGCAGGATTCTACAAGCTCCCGCCGCAGA
GGACGGGTGGAGCCACGTGGGCGGGGCAGGAAGTGGTGGTAAGAAGAAGA
AGACGAAGGGAGGGGCAAGCGGCGGTGGTCAATGGCAAGGGCAGGCGCCT
ATGAACCCTGTCCCTTTGCCACCTACGGCCGACGTGCTAAGCCTGATGCT
ATCCTACTGA
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protein sequence of NO01G02360.1

>NO01G02360.1-protein ID=NO01G02360.1-protein|Name=NO01G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1470bp
MAVAKTEKEAVRSDGEDEKTVELAAVQSNGADDETVGIEAAKKKMKQKKK
KKKAAAVEGVESTKQEEVDMSTTPVMGRERSMVVVKEPAAGGVAAAGAGA
ASALFSTSPLPLPPPLTSSVLIPVAPFLPPASDPPKIFPITTLSSSSLTD
SVPALVPTISAPTVVSISSSTALAAGLAEPGLPPSAPLCSIGGGGKKNTE
WEGRIKDRQHHQGAEGGRGVIKAEAAVAPSGRTRGIGGEVEVGRGGLVAL
KPPEVPEIVVGEIRRRPKSKIRSQYKNRRKMREVIAAIMAGVLDRVDLVV
SGAQPLPTEVEGPPGTKTTTTMAREEMVEEKVKQGPSELPLSKEQPQSVN
VKTKTEERPHQAPLQPESVYKKETEQRPTRAQQQQQNHQLKLQGEMQVEQ
QQKQQQPQPQPQPQPQLQQIAAQQEGDVQEISKVTNVNANPKPSKQQQQQ
QQQQRESPSARLVSLSYQKQNPSLTSPPSSFSFPSSSSYGNGTKVQAAPQ
KQVQQLTTKKQRQQEQQQHKRKQQLQEHQQPQQQQQQQKQQQEKVKFLSA
YAQPQLAAKQKYNSKDTGGRTTTTTATTTRSVTSGSVAINDGRPPLQLGP
QYVQPIYQTGGVGCPARKGRKGGGESSGGGDGGRASGGGHIFQSTRQPLY
SRLHQQHHTPQYYQEYPSAHGGGAELGGSMVGGGGGGRRGTIQRLDGRKE
WGENCGHHMPHRYSAAVIPQVSLYDCLNRHQRHHHDNPQLQHQQRAPHRH
VGGDGGRSGSSTMDGGVYESVMPPPLVMQQAHEVYALDLEAEKAHHAYCQ
GIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGAR
VELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHNEST
ASSSPDGGYSVATTISSGSGSSSSRASTTVATGPSSAASSVVDEEEEETD
IHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSII
FMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKI
LADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGR
PYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEV
AQANVLAIARSVDTIKRRAIPPVPSNSSSCNAGCRGSGGSGSSGSDVRSR
SKGVTIPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAET
TLMEVKPPPPLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGK
GVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPL
ADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLE
AHGIEMGRRILQAPAAEDGWSHVGGAGSGGKKKKTKGGASGGGQWQGQAP
MNPVPLPPTADVLSLMLSY*
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Synonyms
Publications