NO01G00240, NO01G00240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 99.8 bits (247), Expect = 1.000e-17 Identity = 79/184 (42.93%), Postives = 103/184 (55.98%), Query Frame = 0 Query: 1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNC 179 M LSLLALGITL +T A L L SI+AVD + NKD W MKG +NDP VS I +GL V+L + D ++ V FAA+DCR ++GR CK GAR+S K ++R K+K K H K+ +S YYSV+G FR F EN + + LTAA + + DTL+ C Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATD------PLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRR----PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALTVDESVLSDTLTLC 172
BLAST of NO01G00240 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 97.4 bits (241), Expect = 5.000e-17 Identity = 82/192 (42.71%), Postives = 102/192 (53.12%), Query Frame = 0 Query: 1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLTAATSTTQLGA-EDTLSNCREKGGARTTKLFC 192 M R LSLLALG+TLALT Q ML+L SIK + T NKD+WSMKG L DP VS I GL V L + D D S FAA DC + +G CK GAR+S + +K P + K+HN T Y+SVSG FRR Q + + LTA + +G TL+ C K G +T K+ C Sbjct: 1 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTAS------FAAGDCMVRKSSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYFSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 175
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 79/200 (39.50%), Postives = 103/200 (51.50%), Query Frame = 0 Query: 1 MHRALSLLALGITLALT---AAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFCQ 193 M ALSLL LG+T T A L L SI+ VD + NKD W MKG +NDP V I GL V+L + D ++ V FAA+DCR ++GR CK GAR+S K ++R KVK K H K+ +S YYSV+G FR F EN + + LTAA DTL++C + + R T C+ Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATD------PLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRR----PKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALRINGSVLSDTLTSCYDLARKSGRNTISHCE 188
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 79/200 (39.50%), Postives = 103/200 (51.50%), Query Frame = 0 Query: 1 MHRALSLLALGITLALT---AAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFCQ 193 M ALSLL LG+T T A L L SI+ VD + NKD W MKG +NDP V I GL V+L + D ++ V FAA+DCR ++GR CK GAR+S K ++R KVK K H K+ +S YYSV+G FR F EN + + LTAA DTL++C + + R T C+ Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATD------PLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRR----PKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALRINGSVLSDTLTSCYDLARKSGRNTISHCE 188
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 88.2 bits (217), Expect = 3.000e-14 Identity = 78/200 (39.00%), Postives = 102/200 (51.00%), Query Frame = 0 Query: 1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSD-VSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQFENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFCQ 193 M A S LA+GIT +T A L L SI+AVD + NKD W MKG ++DP V IA GL V+L D SD ++ V FAA+DCR +NGR CK GAR+S K ++R K+K K H KT +S YY V+G R F + S LTA + DTL++C + + R T C+ Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVEL-------QDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR----PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSP-LTAKLTVNGDVLSDTLTSCYDLPRMNGRNTITHCE 188 The following BLAST results are available for this feature:
BLAST of NO01G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00240 ID=NO01G00240|Name=NO01G00240|organism=Nannochloropsis oceanica|type=gene|length=974bpback to top protein sequence of NO01G00240.1 >NO01G00240.1-protein ID=NO01G00240.1-protein|Name=NO01G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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