Naga_100293g3, gene7605 (gene) Nannochloropsis gaditana

Overview
NameNaga_100293g3
Unique Namegene7605
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:126608..128606 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100293g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:126608..128606 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL056ngnoL056Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00190NO13G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7852rna7852-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7851rna7851-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7852rna7852Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7851rna7851Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7852

>rna7852-protein ID=rna7852-protein|Name=rna7852|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MARGGGGDGGRGGGWEGGRGGYGGGGGYDGGRGGGYGDRYGGDRPYGDRG
MGGGRGGGGGKRTEYQLIVTDLPPSASWQDLKDHMRGSGGDVCYSDVDRK
GGGLVEFTREDDMLEALERLDRSEFRNRFDTCEIRVRLPKDSPFGRRGDG
GEGGVGAGVAAPEAVLVPALAPGPLPPPPLDDLEAEGGREGGREGGREGR
TEASPDLRRGPLLAGGSAHLPLPAAPAPALRRGESMEAGKRRKVSLIEE
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protein sequence of rna7851

>rna7851-protein ID=rna7851-protein|Name=rna7851|organism=Nannochloropsis gaditana|type=polypeptide|length=324bp
MAARVYVGNLPMDIRERDVEDLFTRYGNVTNVDLKTPARPPAYAFVTFDD
RRDAEDAVRARDNYQLQEGNRLRVEMARGGGGDGGRGGGWEGGRGGYGGG
GGYDGGRGGGYGDRYGGDRPYGDRGMGGGRGGGGGKRTEYQLIVTDLPPS
ASWQDLKDHMRGSGGDVCYSDVDRKGGGLVEFTREDDMLEALERLDRSEF
RNRFDTCEIRVRLPKDSPFGRRGDGGEGGVGAGVAAPEAVLVPALAPGPL
PPPPLDDLEAEGGREGGREGGREGRTEASPDLRRGPLLAGGSAHLPLPAA
PAPALRRGESMEAGKRRKVSLIEE
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Synonyms
Publications