NO05G03360, NO05G03360 (gene) Nannochloropsis oceanica

Overview
NameNO05G03360
Unique NameNO05G03360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4913
Alignment locationchr5:880606..885518 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:880606..885518 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO05G03360 vs. NCBI_GenBank
Match: EWM28061.1 (conserved unknown potein [Nannochloropsis gaditana])

HSP 1 Score: 918.7 bits (2373), Expect = 2.500e-263
Identity = 618/1551 (39.85%), Postives = 776/1551 (50.03%), Query Frame = 0
Query:   75 TPGLNGIVNVPFRFLSLAKTVVFPPKKPTHPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDAAEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNRHAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIELQAGWSNLNPSTFTEGPVVRGGAPALGLTTSTSPSASQASALQSSNAHVLGGWVSQIKAVAEVVAFKICYYSMREARHGEALRQFRLLMSTWGWKKQQRVGRAVDGDAGTGRPLITMMPSSSFXXXXXXXXXXXXXXXXXSCSGGLDTTPRGAAGAPSAAPPTEYNRLDFLSYKWTARQNQIFGDLLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDHYFFNAALEIAKQREMGLFLQANPRPESKLMVRFESHMGSGAGPLLGLPLYMGGRPRLVDSNIENGIGEGDICDLVQLILEREEAAGGEVRREEVLRLLVAAVSVYDPSRPRRPRFKGMQHVRLADELMEAGREREAWGHYCTALKRYERYEKLGLEGGGCGGSVGWSLPTVVMLGRMRVCALRLGGVEKNLGQYLDLTLKLLSQDLRGMVGEETRKLFWEEVLFLVFGIQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNFTSSVSKLGPVTYDDSGEETASSVSTSLEPMLTLLTDTVQVDLNCGWRQLVSFSLCFPDATAAMGCSCLVLLRVVSHLPLPLHVSEMLLRFNKPYIGAVRIVEASSLPASTASALDRIKQSFTAAPALVAPPLQPAVKVD-DQNTAHVTLSLLLQPDKPLDIPLTLSLPMGEAVEVGDLLHAVQLQLLINAPNSTSPS----FSSSLFSPFPPLRRSLCLNLPSGVAYTDGLGVTRANVFKGPV----SAAAATEVYPPSSPATHLSSLPVPLQASLRGFPALEVTRPVAHASLALRTQKEAENRLVTSLVGHLHCLWLKVESNEDTLSNPVLHVRSDPPARSSQLEDAFFFENNSNSSISRRGP------------------TPLKLGKDMQPEAALPVLLPLAPLSSSSTTDAAVLSPQSSVLVPVWVRPKQEGRVKINIVLVYHATASAAVG--------------------------ETDRREDIYSNRLVSYEYVFDLESYAPFVTAFDVASPCPALPPAPSSKIARALQGDTDDKSTADAGAAAAHIFYTGEQVMMRLSIKALHPSSWGESQGGGRPRIEQVVWHPVESGNWAPDRVAAISDKRKEKRNENGEGRVLYSFAQDRHGRRGGGEHDERGMQPHDVLTLTFPFLCPETESSQALSLGHMRLYWRVVSTS-SSSFPSSSFSEKPTAATTASPSSSSWLACTEAE------------------------------------------------*RGGGNSGPSTEEALVWSGARESVVQILPHESIHLRYRVVAVLTGPIALPRLVLTQMPDAAA 1524
            T  LNGI NVPFRFLSL+KTVVFPPKK TH LKAADGRPLEGYTV G+ KQNWI+KHV+QLPSAAILLAPFD++WS  EW +RE  L QDMERLRQQVGPRDVRIF+VL++RA   +G          RESEERL+ FRRR PP FEA KMVYVLQ P+DL  +AP LRR+YKHVRDLSSGYYFLHGKRVKRWES LNRHAQLPLI RYR KQAF                                                                                                                                                                                                                                                                  KQRE+    + +   + K      + +    GP L  PLY+GGRPRL  SN+E  + E D+  LV +ILE EEA   +   E +LRLL  AV+  DPSRP R RF+GMQH+ LA+ELM   R  EAW HYC AL+RY    + G +  G GGS GWSL T  +L RMR+CAL LG        YLDLT +LLS  LR  V EE R+L ++EVL+LV G++                                 ++S       TY+++ +++ SS   S EPM+T+L D V V + C WRQL SFSL F DATAA+G +CLVLLR+VSHLP P+  S++ L FNK YIG + I+E     +    A DR+++ F  +  L +      V VD +   A V + LL  PD+PLDI + L L + EA+E+GD+LHAVQLQL+++  +S S +     SS+ FS   PL R+L LN+PSGVAY D  G+  AN+FKGP+      A A  +     PAT  SSL VPLQA++RGFPA+E+ RP A A+L+L   KEAE +LVT+LVGH+HCL +KVES+   L+NPVL++RSDPPA S + EDA FF      ++   GP                   PLKLG+DMQP  A+P+L       +  +    VL   SS+ VPVWVRP QEGR+KIN+ LVYH+   +  G                            D   D  SN L++ EY FD+ESY PF+TAFD ASP PA P +  SK    LQ D  + S  D+ A A + FYT EQV+MR  +K + P S   S GGGR RIEQV+W+PV + +  P     +SDK +        GR+LYS   D  GR+     +E GMQ  D L+LTFPFLCP+ E +QAL LG M LYWRV+ +S S++ P  +F   P A      +  SW++CTE E                                                   GGN G STE AL+WSGARE V+ I+P E+  L Y +++VLTGPIALPRL++++ P A A
Sbjct:    3 TAPLNGIANVPFRFLSLSKTVVFPPKKQTHALKAADGRPLEGYTVQGVFKQNWIRKHVTQLPSAAILLAPFDDAWSTGEWTQREHALLQDMERLRQQVGPRDVRIFIVLVQRAASAAG---------DRESEERLLGFRRRAPPAFEANKMVYVLQDPKDLSHTAPALRRLYKHVRDLSSGYYFLHGKRVKRWESTLNRHAQLPLIARYRLKQAF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CKQRELAGSHRPSAPHDGKFAALLANDLSPDKGPRLSWPLYVGGRPRLTASNLEGEMSEADLQALVLVILESEEAR-SKPHTEIILRLLTCAVTC-DPSRPVRNRFRGMQHLHLANELMGVDRLAEAWPHYCAALRRYAGDARGGRD--GFGGSHGWSLLTTFVLLRMRMCALMLG----KCSHYLDLTTQLLSNGLRESVREEDRRLLFQEVLYLVCGLR--------GRDTPPSSLESVFSYKSKGRASLEISNSEDWTETCTYNEAQDDSFSSCVAS-EPMITVLPDAVDVAVGCAWRQLFSFSLSFLDATAAIGSTCLVLLRLVSHLPSPVQASQLHLSFNKAYIGTICILEDKGSASMPTPAEDRLRRPFAGSCNLFSSSSPSIVAVDMEHGVARVPVPLLFHPDEPLDIQMALPLVVNEAIEIGDMLHAVQLQLVVDPASSLSSTPPLECSSACFS---PLNRALRLNMPSGVAYLDNFGIMTANLFKGPMPRRAKEAPANPLTTLYDPATQPSSLSVPLQATIRGFPAVEIIRPTAQATLSLSDPKEAEEQLVTTLVGHMHCLLIKVESHGQILTNPVLYLRSDPPALSYREEDALFFNTCQGQAV--HGPRVSVGGRQVQPLEPSTAVVPLKLGEDMQPGKAIPILSVELDRQAGGSN---VLGKHSSIFVPVWVRPVQEGRLKINMALVYHSDIDSGTGAYALAGPSRKISMQSCGRQDNTKFSDNIDSVGDTSSNLLLASEYTFDIESYTPFLTAFDAASPYPASPSSVKSKFPGDLQVDDGNVSEGDSRADADYTFYTDEQVLMRFLVKVVQPFSLESSSGGGRLRIEQVIWYPVRADSEPP-----VSDKDR--------GRILYSSTNDVCGRQ-----NEHGMQSQDTLSLTFPFLCPDKECNQALPLGRMHLYWRVMPSSLSTTRPPKTFERSPEALIKDMLTHISWVSCTEVECPSVEVVAPDVTVQMQVPPEATVGRVFRLSWTLCNRTDRPLALRVTIKEEEGGNPGLSTEGALLWSGARERVIHIVPAEAFSLSYCIMSVLTGPIALPRLLISRAPGANA 1244          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: OWY92598.1 (hypothetical protein PHMEG_00038338, partial [Phytophthora megakarya])

HSP 1 Score: 113.6 bits (283), Expect = 5.600e-21
Identity = 76/234 (32.48%), Postives = 118/234 (50.43%), Query Frame = 0
Query:   88 FLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDAAEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNRHAQL-PLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            F SL +   FP KK       T P +    R  EGY   G++K  W+KKH   LP+  +L   FD  WS  EW ++E  L +++E+L++ V  R+ R+ +VL+++    +GM+          +EERL   RRR     +      VL   +DL   +  L ++   VR+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   45 FASLPREHRFPGKKELREKHGTFPNQTQ--RDFEGYRTQGILKARWLKKHHELLPAVVLLFGEFDPRWSPQEWQQKETTLREEVEKLKRTVSARECRVMLVLMQQVD-DAGMA------PMNTTEERLTNLRRR----LDTDAKGLVLLRSRDLVRGSSVLAKLESSVRNMALEYYKAQSKRVKRYKKALAKTPGFQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETI56443.1 (hypothetical protein F443_00986 [Phytophthora parasitica P1569])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETK96234.1 (hypothetical protein L915_00925 [Phytophthora parasitica] >ETP26280.1 hypothetical protein F441_00961 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETL49605.1 (hypothetical protein L916_00912 [Phytophthora parasitica])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETM02723.1 (hypothetical protein L917_00880 [Phytophthora parasitica])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETM55926.1 (hypothetical protein L914_00919 [Phytophthora parasitica])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: XP_008890644.1 (hypothetical protein PPTG_00841 [Phytophthora parasitica INRA-310] >ETN24587.1 hypothetical protein PPTG_00841 [Phytophthora parasitica INRA-310])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETO85251.1 (hypothetical protein F444_00994 [Phytophthora parasitica P1976])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
BLAST of NO05G03360 vs. NCBI_GenBank
Match: ETP54267.1 (hypothetical protein F442_00938 [Phytophthora parasitica P10297])

HSP 1 Score: 111.3 bits (277), Expect = 2.800e-20
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 0
Query:   73 NKTPGLNGIVNVPF----RFLSLAKTVVFPPKKP------THPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWSAAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDA-AEDARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVRDLSSGYYFLHGKRVKRWESALNR-HAQLPLIVRYRFKQAFWYEFMGHAEKALKHFRKTFDALIEL 315
            NK   L  + N  F     F SL +   FP KK       T P +    R  EGY V G++K  W+KKH   LP+  +L   FD  WS  +W +RE  L +++E+L++ +  R+ R+ ++L+++        V DA       +EERL   RRR     +      VL   +DL   +  L ++   +R+++  YY    KRVKR++ AL +      L  R  FK A +YEF  +  K L+H+  ++ A+I L
Sbjct:   26 NKVLPLVRVANEEFVPKLHFTSLPREHRFPVKKELREKHGTFPNQTQ--RDFEGYRVQGILKARWLKKHHELLPAVVLLFDEFDPRWSPPDWQQRETALREEVEKLKRTLSARECRVMLILLQQ--------VDDAGVAPMNTTEERLTNLRRR----LDTDTKGLVLLRSRDLVRGSAMLVKLESSMRNMALEYYKAQSKRVKRYKKALAKTPGYQALHARLSFKIAHYYEFRRYTTKVLQHYEASYRAIIAL 265          
The following BLAST results are available for this feature:
BLAST of NO05G03360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28061.12.500e-26339.85conserved unknown potein [Nannochloropsis gaditana... [more]
OWY92598.15.600e-2132.48hypothetical protein PHMEG_00038338, partial [Phyt... [more]
ETI56443.12.800e-2031.50hypothetical protein F443_00986 [Phytophthora para... [more]
ETK96234.12.800e-2031.50hypothetical protein L915_00925 [Phytophthora para... [more]
ETL49605.12.800e-2031.50hypothetical protein L916_00912 [Phytophthora para... [more]
ETM02723.12.800e-2031.50hypothetical protein L917_00880 [Phytophthora para... [more]
ETM55926.12.800e-2031.50hypothetical protein L914_00919 [Phytophthora para... [more]
XP_008890644.12.800e-2031.50hypothetical protein PPTG_00841 [Phytophthora para... [more]
ETO85251.12.800e-2031.50hypothetical protein F444_00994 [Phytophthora para... [more]
ETP54267.12.800e-2031.50hypothetical protein F442_00938 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003526NSK003526Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03360.1NO05G03360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584712gene_3146Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100044g25gene2500Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03360.1NO05G03360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03360 ID=NO05G03360|Name=NO05G03360|organism=Nannochloropsis oceanica|type=gene|length=4913bp
ATGTTGGACAGTGTCTTGCCCGAGGAGGTATGGAAAGAGGCTCAACCTGT
GCTCTCCATCCAGGGTGAGGTGGACTGGGAACCCCACATCCACGACGTCT
TCATCCGTGCCCTCCACACCGTAAGCCTCGACAAGGGAAGCAGCATCAGC
GGCCCCTTGGGCAGCACCCTGACGAGCGGTGGCCTCAGCAGCATGGCAGC
GACAATTTCAACTCCAAATAAAACTCCGGGCCTTAATGGCATTGTCAACG
TGCCCTTTCGTTTTCTGAGTCTGGCCAAAACAGTCGTCTTTCCCCCAAAG
AAACCTACCCATCCCCTCAAGGCTGCGGACGGTCGCCCCCTGGAGGGCTA
CACGGTGGGAGGCCTGGTCAAGCAGAATTGGATCAAGAAACACGTGTCAC
AATTACCCTCCGCTGCCATCTTGCTTGCCCCATTTGACAACAGTTGGTCA
GCGGCGGAGTGGGGGCGGAGAGAGTTGGTGCTGTGGCAGGACATGGAACG
CTTGAGGCAACAAGTCGGCCCACGCGATGTCCGCATTTTTGTGGTGTTGA
TAAGGAGGGCGGGACTGCCTAGCGGCATGAGCGTTGGGGATGCAGCGGAG
GATGCAAGGGAGAGCGAGGAAAGGTTGGTGGCTTTCAGGCGACGGACGCC
TCCGGTGTTTGAGGCGGGGAAGATGGTGTACGTCCTGCAATACCCCCAGG
ATCTGCAACCTTCCGCACCGGGCCTCAGAAGGATGTATAAGCATGTAAGG
GATTTATCATCGGGCTACTATTTTTTGCATGGGAAGCGAGTGAAACGCTG
GGAGAGTGCCTTGAACAGACATGCGCAGCTGCCGCTGATTGTGAGGTATC
GCTTCAAACAAGCCTTTTGGTACGAATTTATGGGGCACGCCGAGAAGGCT
CTCAAACACTTCAGAAAAACATTTGATGCACTAATAGAGCTACAAGCAGG
GTGGTCTAACTTGAATCCATCTACATTTACTGAAGGACCGGTGGTGCGAG
GGGGAGCGCCTGCTCTAGGGTTGACTACGTCGACGTCCCCCTCAGCTTCC
CAGGCGAGTGCGCTTCAATCGAGCAATGCGCATGTGTTGGGGGGCTGGGT
ATCGCAGATTAAGGCGGTGGCGGAGGTGGTGGCGTTTAAGATTTGTTACT
ACTCGATGAGGGAGGCGAGGCATGGAGAGGCCTTGAGGCAGTTCCGGTTG
TTGATGTCCACATGGGGGTGGAAGAAGCAGCAGAGGGTAGGGAGAGCTGT
CGATGGCGATGCTGGAACAGGCAGACCCTTGATAACGATGATGCCTTCTT
CGTCGTTCTCGTCGTCGTTCTCTTCCTCCTCTACGTCGACTTCTTCGCCA
CTGGATGGGAGTTGTAGCGGGGGGCTTGACACCACGCCACGAGGAGCAGC
AGGAGCTCCTTCAGCAGCACCACCCACAGAATACAACCGTCTTGACTTTC
TCTCCTACAAATGGACCGCACGGCAAAATCAAATTTTTGGCGATCTTCTC
CAACTATTTCCGTGCTTTCCCTCCCCCCCTTCCAGCATCAGCAACAGCAG
CAGCAACAGCAGTAGCGCAACAGCAGCAGCTACAATAATGACGTATATGG
ACCCGGACCACTATTTCTTTAATGCTGCGCTCGAGATAGCAAAACAAAGG
GAAATGGGTCTTTTCCTACAGGCAAATCCACGGCCGGAGAGTAAATTAAT
GGTCAGGTTCGAGTCGCACATGGGCTCAGGGGCGGGGCCATTATTGGGGT
TGCCTTTGTATATGGGTGGGAGGCCGAGGTTGGTCGATTCGAACATAGAA
AATGGAATCGGGGAAGGAGATATTTGTGACTTAGTACAATTGATTTTAGA
GAGGGAAGAGGCGGCGGGCGGGGAGGTGCGGAGGGAAGAGGTGTTGCGCT
TGTTGGTGGCGGCTGTAAGTGTGTATGATCCGTCGAGACCGAGGAGGCCA
CGGTTTAAGGGAATGCAGCATGTGAGGCTGGCGGACGAATTGATGGAGGC
GGGGAGGGAGAGAGAGGCTTGGGGGCATTATTGCACAGCGTTGAAGAGGT
ATGAGAGGTATGAGAAATTAGGGCTGGAGGGAGGAGGATGTGGAGGGAGT
GTGGGATGGAGTTTGCCGACGGTGGTGATGTTGGGGAGGATGAGGGTGTG
CGCGTTGAGGCTGGGAGGGGTCGAAAAGAATTTGGGACAATACCTTGATT
TGACTCTGAAGCTGTTGAGTCAGGATTTGCGTGGGATGGTGGGGGAGGAG
ACTCGAAAGCTATTTTGGGAGGAGGTGCTCTTCTTGGTGTTTGGGATCCA
GCGGGAAGAGAGGGGGCAGCAGCAGCAGCAAGCCTCCTCGTTATGGTCAT
CGATTTTCACCTTCCACGAGCAACAGCAGCGACAGCCCCCTACTAATTTT
ACCTCGTCCGTATCGAAGCTTGGACCCGTTACTTACGACGACAGTGGGGA
AGAGACCGCCTCCTCCGTTTCCACCTCCCTGGAGCCAATGCTCACTCTTC
TGACCGACACGGTGCAAGTGGACTTGAACTGCGGCTGGCGACAGCTGGTT
TCCTTCTCCTTGTGCTTTCCCGATGCTACTGCTGCAATGGGGTGTTCTTG
TCTTGTGCTCCTGCGGGTTGTCTCCCATTTACCCTTGCCCTTGCATGTGA
GTGAGATGCTGCTTCGTTTTAACAAACCTTACATTGGCGCCGTTCGGATT
GTGGAGGCGTCCTCCCTCCCTGCCTCAACCGCCTCGGCCTTGGATAGGAT
TAAACAATCATTTACCGCCGCGCCTGCTCTTGTTGCTCCTCCTCTTCAAC
CAGCAGTAAAAGTTGATGACCAGAACACTGCTCACGTGACGCTTTCCCTG
TTGCTGCAGCCCGACAAACCCCTCGACATCCCCCTCACCCTCTCCCTCCC
CATGGGCGAGGCCGTCGAAGTAGGCGACCTGCTCCACGCCGTGCAACTTC
AACTTCTGATCAACGCCCCCAACTCAACCTCCCCCTCCTTCTCGTCCTCC
CTTTTTTCACCTTTTCCTCCTTTGCGTCGCTCTCTCTGTCTGAATCTCCC
ATCGGGGGTCGCCTACACAGATGGCCTCGGTGTTACGAGAGCCAACGTCT
TCAAAGGCCCCGTGTCGGCCGCAGCAGCAACAGAAGTCTATCCTCCCTCG
AGCCCGGCCACACATCTCTCTTCCCTTCCTGTCCCCCTGCAAGCGTCCCT
CCGCGGGTTTCCTGCCCTCGAAGTCACCCGTCCCGTCGCCCATGCCTCCT
TGGCTCTTCGCACCCAAAAAGAAGCAGAAAACAGATTAGTCACTAGTCTA
GTCGGGCACCTGCATTGCTTGTGGTTAAAGGTGGAAAGTAATGAAGACAC
GCTCTCTAATCCTGTACTGCATGTACGGAGCGACCCTCCTGCGCGGTCTT
CACAATTGGAGGACGCGTTCTTTTTTGAGAACAACAGCAATAGCAGCATC
AGTAGACGTGGACCCACTCCTTTAAAGTTGGGCAAAGACATGCAGCCTGA
GGCTGCCTTACCCGTACTCCTACCTTTGGCCCCTCTCTCGTCGTCTTCTA
CTACAGATGCTGCTGTGTTATCACCTCAGAGTAGCGTGCTGGTGCCTGTG
TGGGTGCGCCCCAAGCAGGAAGGAAGGGTGAAGATCAACATCGTACTTGT
GTACCATGCTACTGCTTCTGCTGCTGTCGGCGAGACGGACAGGAGGGAAG
ACATTTATTCAAATCGGCTGGTATCGTATGAGTATGTCTTTGACCTTGAG
AGCTATGCCCCCTTCGTGACTGCTTTTGATGTTGCCAGCCCATGTCCTGC
CCTCCCCCCCGCTCCTAGCAGCAAGATCGCGCGTGCCCTCCAAGGAGACA
CAGACGATAAGAGCACTGCTGATGCTGGTGCTGCTGCCGCTCATATATTC
TATACTGGGGAGCAAGTTATGATGCGGCTCTCAATCAAGGCGTTGCACCC
TTCGTCGTGGGGGGAGAGTCAGGGGGGAGGGCGACCGCGGATCGAGCAGG
TAGTATGGCATCCTGTAGAAAGCGGGAATTGGGCTCCTGACAGAGTAGCG
GCAATCAGCGATAAGAGGAAAGAGAAAAGGAATGAGAATGGAGAGGGGCG
TGTATTGTATTCCTTTGCGCAGGATAGGCATGGGAGAAGGGGAGGGGGAG
AGCATGATGAAAGGGGGATGCAGCCTCACGATGTGCTCACTTTGACGTTT
CCGTTTTTGTGCCCTGAGACGGAGAGTAGTCAGGCATTATCTTTGGGCCA
CATGCGACTGTACTGGCGCGTTGTGTCTACCTCCTCTTCTTCGTTTCCCT
CTTCCTCCTTTTCGGAGAAGCCCACTGCTGCTACTACTGCATCCCCCTCC
TCCTCTTCCTGGCTTGCGTGCACTGAGGCCGAATgtcccatcgtaggggt
ggttgcacccgatataattgtccacttacatgcgccttcagatgttatac
tcgggcaggcattcaagttgcgctggactttgaggaatctaaccgagaaa
gtgttgactatacgtgtggttctcaagGAAGGGGGGGGGGGAATTCGGGT
CCCTCCACGGAAGAGGCGTTGGTGTGGAGTGGGGCGAGGGAGAGCGTGGT
GCAGATTTTACCACACGAATCGATACATTTGCGGTATCGTGTTGTGGCGG
TGCTTACGGGGCCCATAGCCTTGCCTCGGTTGGTTTTGACGCAGATGCCC
GACGCTGCTGCTGTTAGCAGTAGCAAGAAGGAAGAGGGAGGGACCTCTTT
GCCTCTCCGGGTGGCTTACCGATACGTAGATAATGTTTTGTCAAACTCCA
CGTTATCTCTCTCCACGCCCCGCAGTGCTGAGAATCGTGGGAGTGTTGTT
GGGGGCCAGCCCTCTGATACACGACACCTATTTGTCATTCCTGAGGCGGC
GCTTAACCAATAG
back to top

protein sequence of NO05G03360.1

>NO05G03360.1-protein ID=NO05G03360.1-protein|Name=NO05G03360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1590bp
MLDSVLPEEVWKEAQPVLSIQGEVDWEPHIHDVFIRALHTVSLDKGSSIS
GPLGSTLTSGGLSSMAATISTPNKTPGLNGIVNVPFRFLSLAKTVVFPPK
KPTHPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWS
AAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDAAE
DARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVR
DLSSGYYFLHGKRVKRWESALNRHAQLPLIVRYRFKQAFWYEFMGHAEKA
LKHFRKTFDALIELQAGWSNLNPSTFTEGPVVRGGAPALGLTTSTSPSAS
QASALQSSNAHVLGGWVSQIKAVAEVVAFKICYYSMREARHGEALRQFRL
LMSTWGWKKQQRVGRAVDGDAGTGRPLITMMPSSSFSSSFSSSSTSTSSP
LDGSCSGGLDTTPRGAAGAPSAAPPTEYNRLDFLSYKWTARQNQIFGDLL
QLFPCFPSPPSSISNSSSNSSSATAAATIMTYMDPDHYFFNAALEIAKQR
EMGLFLQANPRPESKLMVRFESHMGSGAGPLLGLPLYMGGRPRLVDSNIE
NGIGEGDICDLVQLILEREEAAGGEVRREEVLRLLVAAVSVYDPSRPRRP
RFKGMQHVRLADELMEAGREREAWGHYCTALKRYERYEKLGLEGGGCGGS
VGWSLPTVVMLGRMRVCALRLGGVEKNLGQYLDLTLKLLSQDLRGMVGEE
TRKLFWEEVLFLVFGIQREERGQQQQQASSLWSSIFTFHEQQQRQPPTNF
TSSVSKLGPVTYDDSGEETASSVSTSLEPMLTLLTDTVQVDLNCGWRQLV
SFSLCFPDATAAMGCSCLVLLRVVSHLPLPLHVSEMLLRFNKPYIGAVRI
VEASSLPASTASALDRIKQSFTAAPALVAPPLQPAVKVDDQNTAHVTLSL
LLQPDKPLDIPLTLSLPMGEAVEVGDLLHAVQLQLLINAPNSTSPSFSSS
LFSPFPPLRRSLCLNLPSGVAYTDGLGVTRANVFKGPVSAAAATEVYPPS
SPATHLSSLPVPLQASLRGFPALEVTRPVAHASLALRTQKEAENRLVTSL
VGHLHCLWLKVESNEDTLSNPVLHVRSDPPARSSQLEDAFFFENNSNSSI
SRRGPTPLKLGKDMQPEAALPVLLPLAPLSSSSTTDAAVLSPQSSVLVPV
WVRPKQEGRVKINIVLVYHATASAAVGETDRREDIYSNRLVSYEYVFDLE
SYAPFVTAFDVASPCPALPPAPSSKIARALQGDTDDKSTADAGAAAAHIF
YTGEQVMMRLSIKALHPSSWGESQGGGRPRIEQVVWHPVESGNWAPDRVA
AISDKRKEKRNENGEGRVLYSFAQDRHGRRGGGEHDERGMQPHDVLTLTF
PFLCPETESSQALSLGHMRLYWRVVSTSSSSFPSSSFSEKPTAATTASPS
SSSWLACTEAE*RGGGNSGPSTEEALVWSGARESVVQILPHESIHLRYRV
VAVLTGPIALPRLVLTQMPDAAAVSSSKKEEGGTSLPLRVAYRYVDNVLS
NSTLSLSTPRSAENRGSVVGGQPSDTRHLFVIPEAALNQ*
back to top
Synonyms
Publications