NO03G00250, NO03G00250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00250 vs. NCBI_GenBank
Match: EWM29571.1 (uncharacterized protein Naga_100006g11 [Nannochloropsis gaditana]) HSP 1 Score: 310.1 bits (793), Expect = 5.300e-81 Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 0 Query: 14 RMILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPT 205 +M+LAKS ATQSLR QA+ T AKK V L STVRET+P PS K +AEVAATTEKWL+TVTGQKPTSPAETAALYA DGVLWATVSTELRVNPKEIRDYFDVFARLPNL V+DYKP+IR+YGDIALNDGYYTV FDSP+GKKV TKARYVFVYKR+E+SGAWEIIDHHSSAMPVAPAGLK ATTVAPP+ Sbjct: 370 KMLLAKSLATQSLRLQASIT-AKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKV-TKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558
BLAST of NO03G00250 vs. NCBI_GenBank
Match: XP_005854563.1 (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >XP_005854721.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21634.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21794.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 309.3 bits (791), Expect = 9.000e-81 Identity = 159/190 (83.68%), Postives = 171/190 (90.00%), Query Frame = 0 Query: 15 MILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPT 205 M+LAKS ATQSLR QA+ T AKK V L STVRET+P PS K +AEVAATTEKWL+TVTGQKPTSPAETAALYA DGVLWATVSTELRVNPKEIRDYFDVFARLPNL V+DYKP+IR+YGDIALNDGYYTV FDSP+GKKV TKARYVFVYKR+E+SGAWEIIDHHSSAMPVAPAGLK ATTVAPP+ Sbjct: 1 MLLAKSLATQSLRLQASIT-AKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKV-TKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 188
BLAST of NO03G00250 vs. NCBI_GenBank
Match: EWM24920.1 (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana]) HSP 1 Score: 166.8 bits (421), Expect = 7.200e-38 Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0 Query: 57 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 201 D+ EV TT++WL+TVT + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V Y+P++R++ G+ A+NDGYY + PDG++V ARY FVY++ G W I+DHHSS +P APAGL ATTV Sbjct: 38 DERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRK--EGGKWMIVDHHSSLLPTAPAGLAKATTV 184
BLAST of NO03G00250 vs. NCBI_GenBank
Match: EWM24921.1 (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana]) HSP 1 Score: 166.8 bits (421), Expect = 7.200e-38 Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0 Query: 57 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 201 D+ EV TT++WL+TVT + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V Y+P++R++ G+ A+NDGYY + PDG++V ARY FVY++ G W I+DHHSS +P APAGL ATTV Sbjct: 182 DERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRK--EGGKWMIVDHHSSLLPTAPAGLAKATTV 328
BLAST of NO03G00250 vs. NCBI_GenBank
Match: XP_005854298.1 (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >XP_005855250.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21107.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU22059.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 165.6 bits (418), Expect = 1.600e-37 Identity = 82/149 (55.03%), Postives = 102/149 (68.46%), Query Frame = 0 Query: 57 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 201 D+ EV TT+KWL+TVT + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V Y+P++R++ G+ A+NDGYY + PDG++V ARY FVY++ W I+DHHSS +P APAGL ATTV Sbjct: 38 DERVKQEVLQTTQKWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKEGEK--WMIVDHHSSLLPTAPAGLAKATTV 184
BLAST of NO03G00250 vs. NCBI_GenBank
Match: CBJ26233.1 (similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold [Ectocarpus siliculosus]) HSP 1 Score: 141.0 bits (354), Expect = 4.200e-30 Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 0 Query: 51 LPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPF-IRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNE--SSGAWEIIDHHSSAMPVAPAGLKTATTVAPP 204 +P D+ A+A+ TT W +TVT +P +TAALYA DGVLW TVS E+R P++I YFD FARLP L V +Y P +R+YGD A+ G YT F PDG V +AR+ F ++R+ S W I++HHSS+MP APAGLK A P Sbjct: 157 VPTPEEDRKAVAD---TTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSPRPWTIVEHHSSSMPTAPAGLKRVGQEAVP 309
BLAST of NO03G00250 vs. NCBI_GenBank
Match: CBJ26228.1 (similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold [Ectocarpus siliculosus]) HSP 1 Score: 137.5 bits (345), Expect = 4.700e-29 Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 0 Query: 64 VAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPF-IRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNE--SSGAWEIIDHHSSAMPVAPAGLK 196 VA TT W +TVT +P +TAALYA DGVLW TVS E+R P++I YFD FARLP L V +Y P +R+YGD A+ G YT F DG V +AR+ F ++R+ S W I++HHSS+MP APAGLK Sbjct: 132 VADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 266
BLAST of NO03G00250 vs. NCBI_GenBank
Match: WP_036487251.1 (DUF4440 domain-containing protein [Myxosarcina sp. GI1]) HSP 1 Score: 136.7 bits (343), Expect = 8.000e-29 Identity = 72/134 (53.73%), Postives = 89/134 (66.42%), Query Frame = 0 Query: 63 EVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYG-DIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLK 196 EVA TT+ WL TVT E ALYA DGVLW TVS ++R P EI DYF+ FARLP L+V+ YK +RMY D+A+N GYYT F S +G+ ARY FVY++N + WEII+HHSSA+P AP L+ Sbjct: 50 EVAETTDTWLNTVTSGSEGVVDEVVALYAEDGVLWGTVSEQVRDTPAEIGDYFEFFARLPELSVSSYKGCVRMYDEDLAINSGYYTFTF-SENGQTKEVPARYSFVYQKN-GNNQWEIIEHHSSALPEAPETLE 181
BLAST of NO03G00250 vs. NCBI_GenBank
Match: WP_019506721.1 (DUF4440 domain-containing protein [Pleurocapsa sp. PCC 7319]) HSP 1 Score: 135.6 bits (340), Expect = 1.800e-28 Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0 Query: 58 KAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGD-IALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATT 200 K A EVA +T+ WL TVT E ALYA DGVLW TVS ++R P EI DYF+ FA+LP L+V+ YK +R+Y + +A+N GYYT + S DG+ ARY FVY + S+ WEII+HHSSA+P AP L+T +T Sbjct: 53 KKAEKEVAQSTDIWLDTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRSTPVEISDYFEYFAKLPELSVSSYKGCVRVYDENVAINTGYYTFTY-SKDGQTKVVPARYSFVYHKG-SNNQWEIIEHHSSALPEAPETLETVST 193
BLAST of NO03G00250 vs. NCBI_GenBank
Match: WP_021834240.1 (DUF4440 domain-containing protein [Crocosphaera watsonii] >CCQ59796.1 hypothetical protein CWATWH0401_2416 [Crocosphaera watsonii WH 0401] >CCQ59465.1 hypothetical protein CWATWH0005_2445 [Crocosphaera watsonii WH 0005] >CCQ65175.1 hypothetical protein CWATWH0402_4543 [Crocosphaera watsonii WH 0402]) HSP 1 Score: 135.6 bits (340), Expect = 1.800e-28 Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 0 Query: 63 EVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGD-IALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGL 195 EVA TT+ WL TVT E ALY DG+LW TVS ++R NP EIRDYF+ FA+LP L+V+ YK +R Y + +A+N GYYT F DG+ + ARY FVY++N + WEII+HHSSA+P AP L Sbjct: 53 EVADTTDIWLNTVTSGSEEVVDEVVALYGKDGILWGTVSEQVRDNPAEIRDYFEYFAKLPELSVSSYKGCVRTYNENLAINIGYYTFTF-RKDGETIEVPARYSFVYQKN-GNNQWEIIEHHSSALPQAPEAL 183 The following BLAST results are available for this feature:
BLAST of NO03G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00250 ID=NO03G00250|Name=NO03G00250|organism=Nannochloropsis oceanica|type=gene|length=3204bpback to top protein sequence of NO03G00250.1 >NO03G00250.1-protein ID=NO03G00250.1-protein|Name=NO03G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top protein sequence of NO03G00250.2 >NO03G00250.2-protein ID=NO03G00250.2-protein|Name=NO03G00250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=207bpback to top Synonyms
Publications
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