NO12G02810, NO12G02810 (gene) Nannochloropsis oceanica

Overview
NameNO12G02810
Unique NameNO12G02810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2400
Alignment locationchr12:785153..787552 -

Link to JBrowse

Properties
Property NameValue
DescriptionConserved oligomeric Golgi complex, subunit 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:785153..787552 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013167COG_su4
Homology
BLAST of NO12G02810 vs. NCBI_GenBank
Match: EWM25751.1 (Conserved oligomeric Golgi complex, subunit 4 [Nannochloropsis gaditana])

HSP 1 Score: 525.8 bits (1353), Expect = 1.600e-145
Identity = 319/564 (56.56%), Postives = 367/564 (65.07%), Query Frame = 0
Query:    1 MDELALVIQHTESYDRFVRYLAAEAKXXXXXXXXXXXXXXGTEENKEMVVLPAATDLNGAIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGG--LQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGG-AGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGV---------------------------QSHEGGGGEXXXXXXXR-----------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSG---GEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFGGPLSKLTSEEALNVMKLRVDWEETEIGRAQQHLL-TASSG 520
            MD LALVIQHTESYDRF+R++AAE                 T  +    VLPA TDLNGA+AEV+GPFA+LE ++MR+SI KAL+IDELP LAPL+  Q G  L  SG   A  A  G  +++     + TG G +P TSS VDD+FYV+RRCARRALVTGHAGTASAI+NYIN  L DELM VLSAKVRSLRE+PLP+GL PA  +                       QHWS+VK G  AGLETAQQLTA AAGSLMGG AG+GL GGG G +T YP  EAK ALDRLVMLNNL+ACA YT+KLQQELMAEVPSIFQDDP T QLM CL +MS T++ FEQ  +EGLQHV ALIKPK+R FLQDALGV                              E    E       R           +  RL+ + F  LKM++V Y+ KRLEYLLMR  FTQLG LQ DKDLRCL+AFFPS    G+           R+ FARLMQM+ LLNLDVPTDIVDVFGG   KLT EEALN+M+LR DWEE EI +AQ+HLL T S+G
Sbjct:  416 MDALALVIQHTESYDRFLRHVAAE--------------ILETGRDLGAPVLPAVTDLNGAVAEVAGPFALLEDYVMRASIAKALQIDELPALAPLSLVQAGTSLVASG---AGIASIGEGDDL----LLSTGRGDSPLTSSAVDDSFYVLRRCARRALVTGHAGTASAIINYINGALSDELMSVLSAKVRSLRELPLPIGLLPAASS---------LGAPVAGTAVVAVKQHWSKVKEGIGAGLETAQQLTA-AAGSLMGGAAGVGLGGGGLGAVTCYPYEEAKNALDRLVMLNNLSACARYTLKLQQELMAEVPSIFQDDPPTQQLMACLQDMSVTAKHFEQTVDEGLQHVAALIKPKLRSFLQDALGVAQXXXXXXXXXXXXXXXXXGSKVSYELDEDEFAANEAADPFMNRFLEFLGGLLGPISLRLTGRNFSVLKMSVVAYMAKRLEYLLMRLPFTQLGALQLDKDLRCLIAFFPSSTGYGDYSETGQESGRVRDCFARLMQMSHLLNLDVPTDIVDVFGGNSMKLTVEEALNIMRLRTDWEEVEICKAQEHLLMTLSNG 948          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: CBJ31353.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 146.0 bits (367), Expect = 3.400e-31
Identity = 156/605 (25.79%), Postives = 237/605 (39.17%), Query Frame = 0
Query:    1 MDELALVIQHTESYDRFVRYLAAEAKXXXXXXXXXXXXXXGTE----ENKEMV---------------------VLPAATDLNGAIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGG-----------------------------------------GAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDP---------STDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQS--------HEGGGGE-------------XXXXXXXRVRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVF--GGPL-SKLTSEEALNVMKLRVDWEETEI 507
            ++ELA++ QHTESYDRFV++L  E +               T     E+K                        V+PA T L  A AEV+  ++ +E  L+ +S+ KA+ +DE+ P              G AA                            SSC +D F+V +RCA+RAL TGHAG ASA+VN++ +TL  +L+  L  KV+S     LP G    T +                        +W     G  AGL +    +A AA S +   G G V G                                                        + + LV +N L AC+ + ++L++ L  +                    +++M CL  +  T   F +A  + L+ V   ++  +R  +   LG +S        ++    E                    R    LSD  F  L   +  YL KR+E  L ++ FTQLGGLQ DKDLRC++ FF                RE F+RL QM+ LLNL+ P D +D +  G PL ++LT++E ++V++ R D+   ++
Sbjct:  398 LEELAVLTQHTESYDRFVKFLVMEVESAHPSQEEFDATRAPTNGEDGESKXXXXXXXXXXXXRPSVLPAPILEPVMPARTRLQEAGAEVAVYYSQIEGQLLEASVSKAIAVDEVAP--------------GAAA----------------------------SSCAEDAFFVAQRCAKRALATGHAGAASAVVNHVGNTLGVDLLEALVRKVKSTLS-TLPAG-GGGTLDLTIKQLGQIDFTDLASLKDQLQMDNWE----GMGAGLASDLTSSATAAISNIRRTGAGAVPGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNECLVYVNTLEACSTFAVRLREMLERDASXXXXXXXXXXXXXXXHDAERVMSCLQGLGSTRALFTRAASDCLEEVLNRLRQVLRTVVSSHLGEKSAVSYQLSENQYAANEAEDPYAHALVEYLRLLLEPYRPPGGLSDSLFLELLTLVAGYLAKRMEIALKKRLFTQLGGLQLDKDLRCVMGFFTQ--------QAGRGAREPFSRLAQMSLLLNLERPQDAMDYWEPGSPLQAQLTADEVVSVLQQREDFAREDL 946          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: OAE27004.1 (hypothetical protein AXG93_1774s1140 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 125.6 bits (314), Expect = 4.700e-25
Identity = 121/467 (25.91%), Postives = 191/467 (40.90%), Query Frame = 0
Query:   60 AIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            ++ E++G + VLE + M  ++ KA++IDE  P A                                          QT+S VDD FYV++ C+RRA+ T ++    A +N++   L +E    L      LR++ LP                                   +     F AG+ +A+  T VAA                                    LNN+   A Y IKL+ E+       F      +++  CL E+SETS    Q    GL+ +   I P++RG L D +G  S+E    +                        ++  L+   ++SL   ++D+LVKRLE ++++K F QLGGLQ D+D R L+  F SG             R++FARL QM  +LNL+  ++I+D +G   GP++ +LT+ E    + LRVD++   I
Sbjct:  381 SVQELTGYYVVLEEYFMEENVRKAIKIDEFVPDA------------------------------------------QTTSMVDDCFYVLQTCSRRAVSTANSQAVLATLNHVIDILNNEYKEAL------LRKINLP-----------------------------------NLAIRLFSAGVGSAKTGTEVAAA-----------------------------------LNNVDISAEYVIKLKHEIEEHCMETFAGPGEREKIKSCLSELSETSTALRQLGNGGLEQLANAIIPRLRGIL-DVVGPVSYELTEAQYAENEVNDPWVQKLLHLVDGNVAWLQPLLTSNNYDSLVHLIIDFLVKRLEAIMVQKRFNQLGGLQLDRDARTLVGHF-SG-------MTQRTVRDKFARLTQMATILNLEKVSEILDYWGENSGPMTWRLTTTEVRRTLSLRVDFKPESI 720          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: PTQ28942.1 (hypothetical protein MARPO_0151s0016 [Marchantia polymorpha])

HSP 1 Score: 125.6 bits (314), Expect = 4.700e-25
Identity = 121/467 (25.91%), Postives = 191/467 (40.90%), Query Frame = 0
Query:   60 AIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            ++ E++G + VLE + M  ++ KA++IDE  P A                                          QT+S VDD FYV++ C+RRA+ T ++    A +N++   L +E    L      LR++ LP                                   +     F AG+ +A+  T VAA                                    LNN+   A Y IKL+ E+       F      +++  CL E+SETS    Q    GL+ +   I P++RG L D +G  S+E    +                        ++  L+   ++SL   ++D+LVKRLE ++++K F QLGGLQ D+D R L+  F SG             R++FARL QM  +LNL+  ++I+D +G   GP++ +LT+ E    + LRVD++   I
Sbjct:  381 SVQELTGYYVVLEEYFMEENVRKAIKIDEFVPDA------------------------------------------QTTSMVDDCFYVLQTCSRRAVSTANSQAVLATLNHVIDILNNEYKEAL------LRKINLP-----------------------------------NLAIRLFSAGVGSAKTGTEVAAA-----------------------------------LNNVDISAEYVIKLKHEIEEHCMETFAGPGEREKIKSCLSELSETSTALRQLGNGGLEQLANAIIPRLRGIL-DVVGPVSYELTEAQYAENEVNDPWVQKLLHLVDGNVAWLQPLLTSNNYDSLVHLIIDFLVKRLEAIMVQKRFNQLGGLQLDRDARTLVGHF-SG-------MTQRTVRDKFARLTQMATILNLEKVSEILDYWGENSGPMTWRLTTTEVRRTLSLRVDFKPESI 720          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: XP_023004265.1 (conserved oligomeric Golgi complex subunit 4-like [Cucurbita maxima])

HSP 1 Score: 120.2 bits (300), Expect = 2.000e-23
Identity = 110/467 (23.55%), Postives = 186/467 (39.83%), Query Frame = 0
Query:   60 AIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            A+ +++G + +LE   M  ++ KA++IDEL P                                             T+S VDD FYV++ C RRA+ T +  +  A+++  +S L +E    L  K+R            P  G                                                A   +GG G+                  K  ++    LNN+   + Y +KL+ E+  +   +F      +++  CL E+ + S  F+QA   GL+ +   I P+IR  L D +   S+E    E                        ++  ++   ++S    ++D++VKRLE ++++K F+QLGGLQ D+D R L++ F S              R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LRVD++   I
Sbjct:  408 AVQDITGSYVILEGFFMVENVRKAIKIDELVP------------------------------------------DSLTTSMVDDVFYVLQSCLRRAISTSNISSLIAVLSGASSLLSNEYQEALQQKMR-----------EPNLG------------------------------------------------AKLFLGGVGV-----------------QKTGMEIATALNNMDVSSEYVLKLKHEIEEQCSEVFPAPADREKVKSCLSELGDMSNTFKQALNAGLEQLVGTITPRIRPVL-DTVATISYELSEAEYADNEVNDPWVQRLLHGVEINVAWLQPLMTANNYDSFVHLVIDFIVKRLEVIMVQKRFSQLGGLQLDRDARALVSHFSS--------MTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAI 747          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: XP_019419514.1 (PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Lupinus angustifolius] >OIV95182.1 hypothetical protein TanjilG_21572 [Lupinus angustifolius])

HSP 1 Score: 119.0 bits (297), Expect = 4.400e-23
Identity = 103/390 (26.41%), Postives = 167/390 (42.82%), Query Frame = 0
Query:  137 TSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            T+S VDD FYV++ C RRA+ T +  +  A+++  +S L +E    L  K+R            P  G                                                A    GG G+   G           TE   A      LNN+   + Y +KL+ E+  +   +F      +++  CL EM E+S  F+QA   G++ + A I P+IR  L D++G  S+E    E                        ++  ++   +++    ++D++VKRLE ++M+K F+QLGGLQ D+D R L++ F                R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LRVD++   I
Sbjct:  446 TTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSGASSLLTNEYQEALQQKIR-----------EPNLG------------------------------------------------AKLFFGGVGVQKTG-----------TEIATA------LNNIDVSSEYVLKLKYEIEEQCAEVFPAPADREKVKSCLSEMGESSNAFKQALNAGIEQLVATITPRIRPVL-DSVGTISYELSEAEYADNEVNDPWVQRLLHAVETNVAWLQPLMTANNYDTFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHF--------SIMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAI 750          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: ERM93568.1 (hypothetical protein AMTR_s00004p00104770 [Amborella trichopoda])

HSP 1 Score: 118.6 bits (296), Expect = 5.800e-23
Identity = 115/464 (24.78%), Postives = 181/464 (39.01%), Query Frame = 0
Query:   63 EVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            E+SG + +LE   M  ++ KA+ IDE  P                                             T+S VDD FYV++ C RRA+ T    +  A+++   + L +E    L  K+R            P  G                                                A   MGG G+   G           TE   A      LNN+   + Y +KL+QE+      +F      +++  CL ++ E S  F QA   GL+ + A + P++R  L DA+   S+E    E                        ++  ++   ++S    ++D++VKRLE ++M+K FTQLGGLQ D+D R L++ F S              R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LR D++   I
Sbjct:  401 ELSGYYVILEEFFMVENVRKAIRIDEHVP------------------------------------------DSLTTSMVDDVFYVLQSCCRRAISTSKVNSVLAVLSGAVNLLSNEYQEALQRKMR-----------EPNLG------------------------------------------------AKLFMGGVGVQKTG-----------TEITTA------LNNMDVSSEYALKLKQEIEEHCAEVFPAPADREKVKSCLSDLGEVSEGFRQALSSGLEQLAASVTPRLRPTL-DAVASISYELSEAEYAENELNDPWVQNLLHSVETSVSWLQPSMTSNNYDSFLHLVIDFVVKRLEVIMMQKRFTQLGGLQLDRDTRALVSRFSS--------MTQRTVRDKFARLTQMATVLNLEKVSEILDFWGENAGPMTWRLTPAEVRRVLGLRTDFKPEAI 737          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: XP_002302675.2 (conserved oligomeric Golgi complex subunit 4 [Populus trichocarpa] >PNT50290.1 hypothetical protein POPTR_002G179600v3 [Populus trichocarpa])

HSP 1 Score: 118.6 bits (296), Expect = 5.800e-23
Identity = 111/466 (23.82%), Postives = 185/466 (39.70%), Query Frame = 0
Query:   61 IAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            + E++G + +LE   M  ++ KA++IDE  P                                             T+S VDD FYV++ C RRA+ T +  +  A+++   S L +E    L  K+R L                                                            + A   +GG G+   G           TE   A      LNN+     Y +KL+ E+  +    F      +++  CL E+ + S  F+QA   G++ + A + P+IR  L D++   S+E    E                        ++  ++   ++S    ++D++VKRLE ++M+K F+QLGGLQ D+D+R L++ F S              R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LRVD++   I
Sbjct:  420 VQEITGFYVILEGFFMVENVRKAIKIDEHVP------------------------------------------DSLTTSTVDDVFYVLQSCLRRAISTSNVNSVIAVLSAAGSLLSNEYHEALQQKMRELN-----------------------------------------------------------LGAKLFLGGVGVQKTG-----------TEFATA------LNNMDVSGEYVLKLKHEIEEQCAEAFPATADRERVKSCLSELGDVSSTFKQALNAGMEQLVATVTPRIRPVL-DSVATISYELSEAEYADNEVNDPWVQRLLHSVETNVSWLQPLMTANNYDSFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDVRALVSHFSS--------MTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAI 758          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: XP_011025369.1 (PREDICTED: conserved oligomeric Golgi complex subunit 4 [Populus euphratica])

HSP 1 Score: 118.6 bits (296), Expect = 5.800e-23
Identity = 111/466 (23.82%), Postives = 184/466 (39.48%), Query Frame = 0
Query:   61 IAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            + E++G + +LE   M  ++ KA++IDE  P                                             T+S VDD FYV++ C RRA+ T +  +  A+++   S L +E    L  K+R L                                                            + A   +GG G+   G           TE   A      LNN+     Y +KL+ E+  +    F      +++  CL E+ + S  F+QA   G++ + A + P+IR  L D++   S+E    E                         +  ++   ++S    ++D++VKRLE ++M+K F+QLGGLQ D+D+R L++ F S              R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LRVD++   I
Sbjct:  417 VQEITGFYVILEGFFMVENVRKAIKIDEHVP------------------------------------------DSLTTSTVDDVFYVLQSCLRRAISTSNVNSVIAVLSAAGSLLSNEYHEALQQKMRELN-----------------------------------------------------------LGAKLFLGGVGVQKTG-----------TEFATA------LNNMDVSGEYVLKLKHEIEEQCAEAFPASADRERVKSCLSELGDVSTTFKQALNSGMEQLVATVTPRIRPVL-DSVATISYELSEAEYADNEVNDPWVQRLLHSVETNVSWFQPLMTANNYDSFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDVRALVSHFSS--------MTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAI 755          
BLAST of NO12G02810 vs. NCBI_GenBank
Match: XP_006826331.2 (conserved oligomeric Golgi complex subunit 4 [Amborella trichopoda])

HSP 1 Score: 118.6 bits (296), Expect = 5.800e-23
Identity = 115/464 (24.78%), Postives = 181/464 (39.01%), Query Frame = 0
Query:   63 EVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQGGLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRRCARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLNPATGNAXXXXXXXXXXXXXXXXXXXXXXQHWSRVKGGFEAGLETAQQLTAVAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYTIKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVGALIKPKIRGFLQDALGVQSHEGGGGEXXXXXXXR----------------VRQRLSDQGFESLKMALVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDXXXXXXXXXXRERFARLMQMNQLLNLDVPTDIVDVFG---GPLS-KLTSEEALNVMKLRVDWEETEI 507
            E+SG + +LE   M  ++ KA+ IDE  P                                             T+S VDD FYV++ C RRA+ T    +  A+++   + L +E    L  K+R            P  G                                                A   MGG G+   G           TE   A      LNN+   + Y +KL+QE+      +F      +++  CL ++ E S  F QA   GL+ + A + P++R  L DA+   S+E    E                        ++  ++   ++S    ++D++VKRLE ++M+K FTQLGGLQ D+D R L++ F S              R++FARL QM  +LNL+  ++I+D +G   GP++ +LT  E   V+ LR D++   I
Sbjct:  409 ELSGYYVILEEFFMVENVRKAIRIDEHVP------------------------------------------DSLTTSMVDDVFYVLQSCCRRAISTSKVNSVLAVLSGAVNLLSNEYQEALQRKMR-----------EPNLG------------------------------------------------AKLFMGGVGVQKTG-----------TEITTA------LNNMDVSSEYALKLKQEIEEHCAEVFPAPADREKVKSCLSDLGEVSEGFRQALSSGLEQLAASVTPRLRPTL-DAVASISYELSEAEYAENELNDPWVQNLLHSVETSVSWLQPSMTSNNYDSFLHLVIDFVVKRLEVIMMQKRFTQLGGLQLDRDTRALVSRFSS--------MTQRTVRDKFARLTQMATVLNLEKVSEILDFWGENAGPMTWRLTPAEVRRVLGLRTDFKPEAI 745          
The following BLAST results are available for this feature:
BLAST of NO12G02810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25751.11.600e-14556.56Conserved oligomeric Golgi complex, subunit 4 [Nan... [more]
CBJ31353.13.400e-3125.79conserved unknown protein [Ectocarpus siliculosus][more]
OAE27004.14.700e-2525.91hypothetical protein AXG93_1774s1140 [Marchantia p... [more]
PTQ28942.14.700e-2525.91hypothetical protein MARPO_0151s0016 [Marchantia p... [more]
XP_023004265.12.000e-2323.55conserved oligomeric Golgi complex subunit 4-like ... [more]
XP_019419514.14.400e-2326.41PREDICTED: conserved oligomeric Golgi complex subu... [more]
ERM93568.15.800e-2324.78hypothetical protein AMTR_s00004p00104770 [Amborel... [more]
XP_002302675.25.800e-2323.82conserved oligomeric Golgi complex subunit 4 [Popu... [more]
XP_011025369.15.800e-2323.82PREDICTED: conserved oligomeric Golgi complex subu... [more]
XP_006826331.25.800e-2324.78conserved oligomeric Golgi complex subunit 4 [Ambo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010224NSK010224Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02810.1NO12G02810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648482gene_5453Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100162g3gene4759Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02810.1NO12G02810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02810 ID=NO12G02810|Name=NO12G02810|organism=Nannochloropsis oceanica|type=gene|length=2400bp
ATGGATGAGCTAGCATTGGTGATTCAGCACACCGAGAGCTATGACCGTTT
CGTGCGGTACCTTGCTGCGGAAGCTAAAAAGACGAGGAGTAGCAGTAGCA
GTAGCAGCATTCAGGAATCTGGGACGGAAGAGAACAAAGAGATGGTGGTC
TTGCCTGCGGCGACGGATCTGAATGGCGCGATTGCTGAGGTGTCGGGTCC
GTTCGCGGTGTTGGAGCACCATTTGATGCGGTCCTCGATTCACAAGGCCC
TGGAGATAGACGAGCTTCCCCCACTTGCTCCCCTTACATGCCACCAAGGC
GGGCTCCAAGGAAGCGGGATTGCGGCCGCGTCCGCTGCTGGTTCTGGGAG
AGAGGAGGAGGTGTACGGGCCGGGGGCGGTGGGGACAGGTAGTGGTGGGG
CCCCTCAAACGAGCAGTTGCGTGGATGACACTTTTTACGTGGTGAGACGG
TGTGCCCGACGAGCGCTGGTGACGGGGCATGCAGGCACGGCCTCGGCGAT
TGTTAACTATATCAATAGTACGTTGCTGGATGAGTTGATGCCGGTCCTGA
GTGCCAAGGTGCGGAGTCTTAGAGAGATGCCGTTGCCTGTAGGTCTGAAC
CCTGCAACAGGTAATGCTGCTGCTCCTAGCAACAGCAGTGGTGGGGGTGG
CCGAAAGGCGGGTGCTGCCATCGTAGCAGCCAAGCAGCATTGGAGCAGGG
TCAAGGGAGGGTTTGAAGCGGGGCTGGAGACGGCGCAGCAGCTGACTGCT
GTCGCTGCTGGTTCTCTCATGGGAGGCGCAGGGATCGGATTGGTGGGAGG
AGGGGCGGGAACGATCACATATTACCCTGCAACAGAAGCTAAGTTGGCCT
TGGATCGGCTGGTCATGTTGAACAACCTGGCAGCGTGTGCGGTGTATACG
ATAAAGCTGCAACAGGAGCTGATGGCGGAGGTACCCTCGATTTTTCAGGA
TGACCCGTCCACGGACCAGTTGATGGTGTGTCTGGGGGAGATGAGTGAGA
CGAGTCGACAGTTTGAGCAGGCGTGTGAGGAGGGGTTACAGCATGTCGGG
GCGTTGATTAAGCCGAAGATCAGAGGGTTTTTGCAGGATGCGTTGGGGGT
ACAAAGTCACGAGGGAGGAGGAGGAGAGGGAGGGGGGAGGGGATGGGGGA
GAGTAAGgtgtcttatgagttgaacgaggaggactttgccggcaatgaag
cggtggatccatgggtccatcgcttcgtggagtttttggggggcgtactg
ggacctattagGCAGCGATTGAGTGATCAGGGATTTGAGAGTTTGAAGAT
GGCGCTGGTTGATTATTTGGTGAAGAGGTTGGAGTACTTATTGATGCGAA
AATCCTTCACGCAATTAGGGGGATTGCAGTTTGATAAGGATTTGAGATGT
TTGTTGGCGTTTTTCCCCTCGGGGGGTGAGGATGGGGGGAGAAAGGGAGG
GAGGGGGGGGATGAGAGAACGGTTTGCGAGGTTGATGCAGATGAACCAGC
TGTTGAACTTGGATGTACCGACGGATATTGTGGATGTGTTTGGGGGTCCT
TTGAGCAAATTGACGTCAGAGGAAGCCTTGAACGTGATGAAATTAAGGGT
GGATTGGGAAGAGACGGAGATAGGGAGGGCGCAGCAGCATTTGTTAACGG
CCTCGTCGGGGGCGGGCGGAACGGGGGATGGCGGGTTCTTGTAGGGGAAG
ATAGCAAAAGTTGAGAATGTCGATGTGGGAAAAGGACATTAATCAAGAAT
TGGATGATGGGATTTCATTATTTGATGATATTGCTACTTGTTTTTATTCA
CTTACTATTATGTGGTTCGCGGACTTTTTTGGGGGCGCTATCAACCCAAA
ATCCACGGAGATGCCCTATAACTGTGCACAGCGAGACCTGGTGCTGTGGC
ACGGCAAAAGGTGTGTCTTGGAAGGGAACGATGGAGATAGAGGGAAGAAG
AACACAACGCAAGGGCACGGGGAAGAGAGAAGAAAAACGCAACTCAAATC
GTCCTGAAAGGCCGCAGGTCTTCAACCTTCTTCGCGTCTTCGTTTTCACC
ACACAACAGTTTCTCGACAAAGCACGGCGCATCATCTACATCTACGCACC
AACGCGACAGGTGGTCTAGAGAGCCAAACCTGTCGTCAACCCTCCCACCC
TCCACCAAAGGGGGGGACCGCCCTATCCATATGGTCACTGCGCACACAGC
CTCGATATGGGCAGGATTGCGCGTTGTGGGCTTCCCCCGATCGTTCAGGT
CCCCAGGCCGGCTGACGCATCGGCCCTCACACGATTCTTATCTCATATGC
CGTCAGTCGTTGGAGTCGACTCGACGCCATATCCTTGACCATAACTTGAA
TGAAACAATTAAGGAGATCGGCTCGCTTCTGGCTAAAATTTAATATGACG
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protein sequence of NO12G02810.1

>NO12G02810.1-protein ID=NO12G02810.1-protein|Name=NO12G02810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=530bp
MDELALVIQHTESYDRFVRYLAAEAKKTRSSSSSSSIQESGTEENKEMVV
LPAATDLNGAIAEVSGPFAVLEHHLMRSSIHKALEIDELPPLAPLTCHQG
GLQGSGIAAASAAGSGREEEVYGPGAVGTGSGGAPQTSSCVDDTFYVVRR
CARRALVTGHAGTASAIVNYINSTLLDELMPVLSAKVRSLREMPLPVGLN
PATGNAAAPSNSSGGGGRKAGAAIVAAKQHWSRVKGGFEAGLETAQQLTA
VAAGSLMGGAGIGLVGGGAGTITYYPATEAKLALDRLVMLNNLAACAVYT
IKLQQELMAEVPSIFQDDPSTDQLMVCLGEMSETSRQFEQACEEGLQHVG
ALIKPKIRGFLQDALGVQSHEGGGGEGGGRGWGRVRQRLSDQGFESLKMA
LVDYLVKRLEYLLMRKSFTQLGGLQFDKDLRCLLAFFPSGGEDGGRKGGR
GGMRERFARLMQMNQLLNLDVPTDIVDVFGGPLSKLTSEEALNVMKLRVD
WEETEIGRAQQHLLTASSGAGGTGDGGFL*
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Synonyms
Publications