Naga_100162g3, gene4759 (gene) Nannochloropsis gaditana

Overview
NameNaga_100162g3
Unique Namegene4759
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:692169..695187 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100162g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:692169..695187 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL009ngnoL009Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02810NO12G02810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4929rna4929-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4929rna4929Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4929

>rna4929-protein ID=rna4929-protein|Name=rna4929|organism=Nannochloropsis gaditana|type=polypeptide|length=954bp
MYPVCPTTTSSPVLTRCAVSDPHSAHSVPMAADRDDHSLVESEGRATAAL
PIGDPASEAAAAGTGPCNEEFQELLESLHNELDEVTKKKASVEAALGDEL
DSLLIVEATKAVPAPDGKQLALQMKDLEKAFAPTRVAHLTAKVSALTEHV
YGCQELADKMSSSVRELDERQMRVQRVLAMVEDIINLKTCAEGVARALEE
DDLLGATSYVRQFHSIEGASAKASGHYNVLVAAEARLKETVLRRVHLAVS
RSELDDVFKFCPLLGPLGLAKEGASIYESFAERLLKEGLDPLAAETNKLP
AVQLLPKIYNTAAGFLQRHLPLVSHGFKQVDADVSLIRLVQRECEDAAIP
VIRRFLEDKGVAEKCRAVAEASRGDNGLDGGAFYARKEGGHRRRGAQASG
GEGEEALPIGEMDGLMDALALVIQHTESYDRFLRHVAAEILETGRDLGAP
VLPAVTDLNGAVAEVAGPFALLEDYVMRASIAKALQIDELPALAPLSLVQ
AGTSLVASGAGIASIGEGDDLLLSTGRGDSPLTSSAVDDSFYVLRRCARR
ALVTGHAGTASAIINYINGALSDELMSVLSAKVRSLRELPLPIGLLPAAS
SLGAPVAGTAVVAVKQHWSKVKEGIGAGLETAQQLTAAAGSLMGGAAGVG
LGGGGLGAVTCYPYEEAKNALDRLVMLNNLSACARYTLKLQQELMAEVPS
IFQDDPPTQQLMACLQDMSVTAKHFEQTVDEGLQHVAALIKPKLRSFLQD
ALGVAQAVGKGQGGDAGQGGARGGSKVSYELDEDEFAANEAADPFMNRFL
EFLGGLLGPISLRLTGRNFSVLKMSVVAYMAKRLEYLLMRLPFTQLGALQ
LDKDLRCLIAFFPSSTGYGDYSETGQESGRVRDCFARLMQMSHLLNLDVP
TDIVDVFGGNSMKLTVEEALNIMRLRTDWEEVEICKAQEHLLMTLSNGIS
SDTL
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Synonyms
Publications