jgi.p|Nanoce1779_2|616016, gene_11729 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|616016
Unique Namegene_11729
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_111:26359..28262 -

Link to JBrowse

Properties
Property NameValue
TranscriptId616102
ProteinId616016
Product nameTLC domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_111supercontigscaffold_111:26359..28262 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL090ncniL090Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G02290NO21G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|616016mRNA_11729-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|616016mRNA_11729Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|616016

>mRNA_11729-protein ID=mRNA_11729-protein|Name=jgi.p|Nanoce1779_2|616016|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MAISSSSPALSLYDALYDKAETRHFTVLILGSYAMTLLMQIISHFASRAL
LPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH
HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLA
HHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGL
SRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCR
VLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFVVIAVLNVWWFGKMLA
LLKKRESKRGRERSNRS
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Synonyms
Publications