NO21G02290, NO21G02290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G02290 vs. NCBI_GenBank
Match: EWM22737.1 (TRAM, LAG1 and CLN8 lipid-sensing domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 109.4 bits (272), Expect = 2.100e-20 Identity = 75/194 (38.66%), Postives = 100/194 (51.55%), Query Frame = 0 Query: 124 LYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHG-----LSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFVVIAVLNVWWFGKMLALLKKRESKRGRE 313 LY + S+ SA P +L+ ++ S F Y+LSIMFIATELSTP VN+RWHL+H+ G +RP L + D G L+ D+ +VVVF + RV LPFQ +MV +H LG+ S WV VQC SFVVIA LN+WWFG+ML LL ++ ++ Sbjct: 82 LYDIIIHSMSDIGPVQRGQSAFPPHHTPNLVSSLPMPSG--FGPRYILSIMFIATELSTPFVNVRWHLLHVTPPQGSLSVSTTRPMHSKRCLPDVHSKSDVNKPD---QAGLLSTLKLVNDVVLVVVFAISRVCALPFQLRMVVKHAGPLGRASASWVMVQCVLSFVVIACLNLWWFGRMLRLLGRQGKMNSKD 270
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_001180495.1 (PREDICTED: transmembrane protein 56-B [Strongylocentrotus purpuratus]) HSP 1 Score: 78.2 bits (191), Expect = 5.200e-11 Identity = 75/299 (25.08%), Postives = 133/299 (44.48%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRHHSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALG-KVSRWWVSVQCGASFVVIAVLNVWWFGKML----ALLKKRESKRGRERSNRSS 319 + +++ S+ + + I + S L+P+ Y + +R +WN+RI S+FHAF VS+L+ L +GP+ + + SYL V +A+T GY+ D ++L PL + + HH+ AF++++ + + + + E STP VNLRW L +G KD ++ AM+ F RV +LP + + + G + W+++ C S V + +NV+WF KM ++ K+ + R ++SN SS Sbjct: 18 YVPVVVYSFVIFGVCACIIPYLSWWLVPK-YRTISTPERFDWNSRILSAFHAFLVSSLAIYNCLFDGPTWEDKIWGTSYLPRVTIALTAGYISCDLIIMLIGF-------------PLKESIFYILHHVAVLGAFAANVLYGPLTFFANIRVNAEFSTPFVNLRWMLYLLGY-----------------------------KD----TKFYMYNGFAMLGAFFAVRVGILPIFYYFMLKSFFEKGFRRLPMWMTLTCLVSSVGLDSINVYWFFKMARGASRMMAKKAAIRLEQKSNASS 269
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_016751371.1 (PREDICTED: transmembrane protein 56-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 73.2 bits (178), Expect = 1.700e-9 Identity = 73/295 (24.75%), Postives = 132/295 (44.75%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFV---VIAVLNVWWFGKMLALLKKRESKR 310 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA V+A+S + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G + K L + + V + V RVL+ + F + H + ++ + + + FV V++V+N++WFGK++ L+K +KR Sbjct: 26 YTSIICGICAYKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFVTAMSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVGMK----------------------------RSKAYLVN-----GVVIFVAWFVARVLLFMYLFYHIYLHYDQVKQMHSYGLLL----IFVVPSVLSVMNLFWFGKIIRGLRKTLAKR 266
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_012459969.1 (PREDICTED: transmembrane protein 56-like isoform X1 [Gossypium raimondii] >KJB75377.1 hypothetical protein B456_012G039200 [Gossypium raimondii]) HSP 1 Score: 72.8 bits (177), Expect = 2.200e-9 Identity = 72/295 (24.41%), Postives = 132/295 (44.75%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFV---VIAVLNVWWFGKMLALLKKRESKR 310 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA ++A+S + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G + K L + + V + V RVL+ + F + H + ++ + + + FV V++V+N++WFGK++ L+K +KR Sbjct: 26 YTSIICGICACKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFITAMSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVGMK----------------------------RSKAYLVN-----GVVIFVAWFVARVLLFMYLFYHIYLHYDQVKQMHSYGLLL----IFVVPSVLSVMNLFWFGKIIRGLRKTLAKR 266
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_016751225.1 (PREDICTED: transmembrane protein 56-like isoform X1 [Gossypium hirsutum] >XP_017612172.1 PREDICTED: transmembrane protein 56-like isoform X1 [Gossypium arboreum]) HSP 1 Score: 72.4 bits (176), Expect = 2.900e-9 Identity = 72/295 (24.41%), Postives = 132/295 (44.75%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFV---VIAVLNVWWFGKMLALLKKRESKR 310 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA ++A+S + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G + K L + + V + V RVL+ + F + H + ++ + + + FV V++V+N++WFGK++ L+K +KR Sbjct: 26 YTSIICGICACKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFITAMSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVGMK----------------------------RSKAYLVN-----GVVIFVAWLVARVLLFMYLFYHIYLHYDQVKQMHSYGLLL----IFVVPSVLSVMNLFWFGKIIRGLRKTLAKR 266
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_006353064.1 (PREDICTED: transmembrane protein 56-B-like [Solanum tuberosum] >XP_015166665.1 PREDICTED: transmembrane protein 56-B-like [Solanum tuberosum]) HSP 1 Score: 71.6 bits (174), Expect = 4.900e-9 Identity = 74/297 (24.92%), Postives = 123/297 (41.41%), Query Frame = 0 Query: 25 FTVLILGSYAMTL---LMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYED-------VRHHSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFG--VCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFVVIAVLNVWWFGKMLALLKKRESKR 310 +T + G +A + L Q+IS F R TY L QR EWN R S+ HA +SA+S +L+ D + S L+ L ++ GY L+D ++ + + P + + HH L A+A + S+Y G + + M + +E++TP +N+RW L D L R + +V+ F V R+L+ + F V+ H + + + + + G + V+N+ WFGK++ LKK SKR Sbjct: 41 YTSVFAGIFACKMVYDLCQLISSFYFR-----TYTTLTKIQRTEWNNRGMSTVHAIFISAVS--TYFAFWSNLFSDQNPDGLLITRSSPLSTFALGVSAGYFLSDLGMICW-------------FYPSLGGLEYVVHHSLSAIAVAYSMYTGEGQLYTFMVLISEVTTPEINMRWFL-----------------------------------DTAGLKRSYAYLINGVVIFFAWLVARILLFIYMFYHVSLHYDQVIHMHIFGILLVFGVP-AALGVMNLMWFGKIIKGLKKNLSKR 281
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_006366622.1 (PREDICTED: transmembrane protein 56-like [Solanum tuberosum] >XP_006366623.1 PREDICTED: transmembrane protein 56-like [Solanum tuberosum] >XP_006366624.1 PREDICTED: transmembrane protein 56-like [Solanum tuberosum] >XP_015160470.1 PREDICTED: transmembrane protein 56-like [Solanum tuberosum] >XP_015160471.1 PREDICTED: transmembrane protein 56-like [Solanum tuberosum] >XP_015160472.1 PREDICTED: transmembrane protein 56-like [Solanum tuberosum]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 76/292 (26.03%), Postives = 123/292 (42.12%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYED-------VRHHSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMGSNHGLSRPTREGGRLGGKARGREWTPMDGGKDKGPLARWARPVDMAMVVVFGVCRVLVLPFQFKMVTRHVIALGKVSRWWVSVQCGASFVVIAVLNVWWFGKMLALLKKRESKR 310 ++ +I G +A L+ + F+S + + Y L +Q+ EWN R S+ HA ++A+S + L L+ D + S L+ L ++ GY L D ++L+ + P + L HHLL +A S ++ M + +E +TP +NLRW+L G K K L MV V+ V R+LV + F H + KVS + + + C +VIAV+N+ WF K++ LKK +KR Sbjct: 26 YSSVIGGVFACKLVYDLSQIFSS--IYFKRYAGLSKSQQVEWNNRSISTVHAIFITAMS--LFLAFWSDLFSDDQLSGLVIMRSSTLSTSVLGVSVGYFLTDLAMILW-------------FYPSLGGMEYLVHHLLSLVALSYAMLTGEAQFYVYMVLLSEATTPGINLRWYLDVAGLK----------------------------KSKAYLIN-----GFMMVFVWLVARILVFIYVFYHFYVHYDQVMKVSSFGIFLVCVVP-LVIAVMNLVWFWKIVKGLKKTLAKR 266
BLAST of NO21G02290 vs. NCBI_GenBank
Match: KHG02961.1 (Transmembrane 56 [Gossypium arboreum]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 51/178 (28.65%), Postives = 88/178 (49.44%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMG 196 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA ++ALS + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G Sbjct: 26 YTSIICGICACKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFITALSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVG 186
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_016751372.1 (PREDICTED: transmembrane protein 56-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 70.1 bits (170), Expect = 1.400e-8 Identity = 51/178 (28.65%), Postives = 88/178 (49.44%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMG 196 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA V+A+S + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G Sbjct: 26 YTSIICGICAYKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFVTAMSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVG 186
BLAST of NO21G02290 vs. NCBI_GenBank
Match: XP_016751373.1 (PREDICTED: transmembrane protein 56-like isoform X3 [Gossypium hirsutum]) HSP 1 Score: 70.1 bits (170), Expect = 1.400e-8 Identity = 51/178 (28.65%), Postives = 88/178 (49.44%), Query Frame = 0 Query: 25 FTVLILGSYAMTLLMQIISHFASRALLPQTYPALPLAQRDEWNTRICSSFHAFAVSALSCRVMLTEGPSLYEDVRH-------HSYLAPVCLAITTGYLLADATLVLYSTLPRSLQSSSLPYGPLSAPVPTLAHHLLGAMAFSSSLYFRAGYVLSIMFIATELSTPLVNLRWHLIHMG 196 +T +I G A ++ + F+S + ++YP+LP QR EW+ R S+FHA V+A+S + +LY D ++ S L+ L + GY LAD ++++ + P + + HHLL A + S+ G + + M + +E +TP +NLRW+L +G Sbjct: 26 YTSIICGICAYKMVYDLTQLFSS--VYFKSYPSLPKIQRTEWSNRSISTFHAMFVTAMSLYFVFWS--NLYSDNQYAGMVTFRSSALSTFSLGASVGYFLADLGMIIW-------------FYPSLGGMEYVLHHLLSLAAVAYSMLTGEGQLYTFMVLISETTTPGINLRWYLDTVG 186 The following BLAST results are available for this feature:
BLAST of NO21G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02290 ID=NO21G02290|Name=NO21G02290|organism=Nannochloropsis oceanica|type=gene|length=1745bpback to top protein sequence of NO21G02290.2 >NO21G02290.2-protein ID=NO21G02290.2-protein|Name=NO21G02290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top protein sequence of NO21G02290.1 >NO21G02290.1-protein ID=NO21G02290.1-protein|Name=NO21G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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