jgi.p|Nanoce1779_2|615938, gene_11271 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|615938
Unique Namegene_11271
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_110:14347..16282 -

Link to JBrowse

Properties
Property NameValue
TranscriptId616024
ProteinId615938
Product nameputative ADP-ribosylation factor
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:14347..16282 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
GO:0006886intracellular protein transport
GO:0007264small GTPase mediated signal transduction
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL080ncniL080Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03550NO11G03550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615938mRNA_11271-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615938mRNA_11271Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|615938

>mRNA_11271-protein ID=mRNA_11271-protein|Name=jgi.p|Nanoce1779_2|615938|organism=Nannochloropsis oceanica|type=polypeptide|length=217bp
MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIG
FNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL
SEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAK
GRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTHHGIRQDDTIHPAAA
LRPAAGSFNAPAGGGW*
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Synonyms
Publications