NO11G03550, NO11G03550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03550 vs. NCBI_GenBank
Match: EWM24831.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 409.1 bits (1050), Expect = 8.700e-111 Identity = 197/216 (91.20%), Postives = 203/216 (93.98%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTHHGIRQDDTIHPAAALRPAAGSFNAPAGGGW 217 MGQ+M R LDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL EA+ EL HLL+EPQLLDSILLVYANKADLP AISVQEMA LQLD+VAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHT+HGIRQD+TI PAAA RPAAGS PAGGGW Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAAFRPAAGSLEGPAGGGW 216
BLAST of NO11G03550 vs. NCBI_GenBank
Match: EWM24834.1 (adp-ribosylation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 285.0 bits (728), Expect = 1.900e-73 Identity = 142/185 (76.76%), Postives = 153/185 (82.70%), Query Frame = 0 Query: 1 MGQIMQRALD---VLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG ++ R LD L GK+++R+LMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVE V Y+NI FTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADR R EAK EL LL+E QL S +LV+ANKADLP AI V E+A LQLD AKGR WYIQPSCA TGDGLVEGLDWLS KLKE G Sbjct: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAG 185
BLAST of NO11G03550 vs. NCBI_GenBank
Match: EWM24832.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 278.1 bits (710), Expect = 2.300e-71 Identity = 144/193 (74.61%), Postives = 155/193 (80.31%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTHHGIRQDD 194 MGQ+M R LDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL EA+ EL HLL+EPQLLDSILLVYANKADLP AISVQEMA LQLD+V A+ G EG + ++V H +R+D+ Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVG-----------ALLEGGREEGKGY-----RDVDRDADHYLREDE 177
BLAST of NO11G03550 vs. NCBI_GenBank
Match: XP_002341722.1 (ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500] >EED24335.1 ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500]) HSP 1 Score: 239.2 bits (609), Expect = 1.200e-59 Identity = 110/182 (60.44%), Postives = 146/182 (80.22%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG ++ R LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S+ E+ L L S+ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLVVSRLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: XP_002151474.1 (ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >XP_002151475.1 ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >EEA20474.1 ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >EEA20475.1 ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >KFX47728.1 ADP-ribosylation factor [Talaromyces marneffei PM1]) HSP 1 Score: 238.8 bits (608), Expect = 1.600e-59 Identity = 109/182 (59.89%), Postives = 146/182 (80.22%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG ++ + LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S+ E+ L L S+ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGMVVSKLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: XP_020120324.1 (ADP-ribosylation factor [Talaromyces atroroseus] >GAM41493.1 ADP-ribosylation factor [Talaromyces cellulolyticus] >OKL60203.1 ADP-ribosylation factor [Talaromyces atroroseus] >PCG91887.1 Small GTPase superfamily, ARF/SAR type [Penicillium occitanis] >PCG92288.1 hypothetical protein PENOC_093310 [Penicillium occitanis]) HSP 1 Score: 238.0 bits (606), Expect = 2.700e-59 Identity = 109/182 (59.89%), Postives = 146/182 (80.22%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG ++ + LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S+ E+ L L S+ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLVVSKLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: CEN62826.1 (Putative ADP-ribosylation factor (Broad) [Aspergillus calidoustus]) HSP 1 Score: 236.9 bits (603), Expect = 6.000e-59 Identity = 110/182 (60.44%), Postives = 144/182 (79.12%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG + R D LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S E+ L L S+ + RPWYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGIAISRLFDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIIEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RPWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: OJI97368.1 (hypothetical protein ASPVEDRAFT_49389 [Aspergillus versicolor CBS 583.65] >OJJ63565.1 hypothetical protein ASPSYDRAFT_53235 [Aspergillus sydowii CBS 593.65]) HSP 1 Score: 236.9 bits (603), Expect = 6.000e-59 Identity = 110/182 (60.44%), Postives = 144/182 (79.12%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG + R D LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S E+ L L S+ + RPWYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGIAISRLFDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RPWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: CRG84953.1 (ADP-ribosylation factor [Talaromyces islandicus]) HSP 1 Score: 236.1 bits (601), Expect = 1.000e-58 Identity = 109/182 (59.89%), Postives = 145/182 (79.67%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG ++ + LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S E+ L L S+ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLVVSKLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of NO11G03550 vs. NCBI_GenBank
Match: KKK24605.1 (ADP-ribosylation factor [Aspergillus ochraceoroseus] >KKK26354.1 ADP-ribosylation factor [Aspergillus rambellii] >PTU22655.1 hypothetical protein P175DRAFT_0432453 [Aspergillus ochraceoroseus IBT 24754]) HSP 1 Score: 236.1 bits (601), Expect = 1.000e-58 Identity = 109/182 (59.89%), Postives = 144/182 (79.12%), Query Frame = 0 Query: 1 MGQIMQRALDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLSEAKEELFHLLAEPQLLDSILLVYANKADLPHAISVQEMAHFLQLDSVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 183 MG + + D LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EA+EEL +L E +L D++LLV+ANK DLP+A+S E+ L L S+ + RPWYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLTVSKLFDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RPWYIQSTCATTGDGLYEGLEWLAETLRKTG 181 The following BLAST results are available for this feature:
BLAST of NO11G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03550 ID=NO11G03550|Name=NO11G03550|organism=Nannochloropsis oceanica|type=gene|length=1905bpback to top protein sequence of NO11G03550.1 >NO11G03550.1-protein ID=NO11G03550.1-protein|Name=NO11G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=217bpback to top Synonyms
Publications
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