Naga_100234g3, gene5652 (gene) Nannochloropsis gaditana

Overview
NameNaga_100234g3
Unique Namegene5652
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:1000742..1002730 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100234g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:1000742..1002730 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03550NO11G03550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5856rna5856-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5855rna5855-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5856rna5856Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5855rna5855Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5856

>rna5856-protein ID=rna5856-protein|Name=rna5856|organism=Nannochloropsis gaditana|type=polypeptide|length=195bp
MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIG
FNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL
HEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVGA
LLEGGREEGKGYRDVDRDADHYLREDEGSLVMLCRPLDELTLCIV
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protein sequence of rna5855

>rna5855-protein ID=rna5855-protein|Name=rna5855|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIG
FNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL
HEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAK
GRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAA
FRPAAGSLEGPAGGGW
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Synonyms
Publications