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Properties
| Property Name | Value |
|---|
| Product | adp-ribosylation factor |
| Orig transcript id | gnl|cribi|Naga_100234g3.1035.mrna |
| Orig protein id | gnl|cribi|Naga_100234g3.1035 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:1000742..1002730 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5855 ID=rna5855|Name=rna5855|organism=Nannochloropsis gaditana|type=mRNA|length=2395bp
TGTCGTAAGGATCGCAACTCGCCTGCGTTTTCATTTCTACATCTTCACGC
ATAAGACTGATTCTTCTTTCTCATCTTCGATTCAATGCATATAGATGAAG
TTCTACAGGAAGCGCACAGCCGCTTTAGTGTTTATCGCCCTTCTTGGCGT
GATCCTGGTTGTCGGAGCGAGGGATGTGAAGCATACGGCAACAGAACCAG
GCCACGAGATTAAGACTGATGTCTCTCTTGTGGATGGCAAGCCAGTGGAA
ATCACTGATATACAGAAATCATCTCTGAAAAAATCCACGGAGCAAGTGAA
TGAAGACAATGAAGAAATTAAGAAGGGAGACGAAGGTGCTGAGGAAGAAG
AGGAGGATGAAGCTGAAGAGGAAGAAGAGGAGAACCCGCTGACGGAGGAA
AACAAAAAAGAAGCTGTGCAAAAAAATGATGAAAACAAAGAGAACGTTTC
AGAGGTAGGCGTGATTGGAGAGGAGCAGGAAGAGATGAAAGAGGGGAAAA
AGAAGGAGATAGAGGCAGATGCAGAAGCAGGGGAGGAAGAAGAGGAAGAG
GAAGAGGAAGAGGAAGAAGACGATGGGGTGGAGATGGAAAGCGAGGGAGG
AGAAGATGAGGATGAGGGGATAGAAAAGGAAGAGGATGAGGAGGAGGTGG
TGGAGATGAAGGGGGAGGTGGCAAAAGAAGGAAAGATTGAAGAGGAGGAC
AAGGACCACGGGGAGGGTATAGTTGAGGACGAAAAGGAGGAGGAGAAAGG
GGAGGAAGGAGAGGAGGACGAGTTGATCGCGGGTGAGAAGGGGGAGGAGG
AGAAGGACGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAG
GGAGAAGAGGAAGAGGACAACGGGGAGGAAGATGAAGGGATTGATGAGGA
GGTGGAGGAGGAGGTGGAGACAGAAGGGGAGGAGGACGAGGAGGACGAGG
AGGACGAGGGCGAGGAGGACAAGGAGATCGCGGCCTCTGGAGAGAAAAAA
AAGTCGAATGGTAGCTCGATGGATGCCTCCGCACCTGATGTGAAGGCCGA
TGGTGACCAACTCCCTGTTTCGGAGGCGCCTGAAGACGCGAAGGAGGAGG
AATGGCTGGACGCCCTCGCCAGCACCGTAGAAGACGTCATCGAAGAGGAG
GAGAAGGAGGCGAACGCGGGCTGGCAGGGCCTGCGAGGCTCCCACCGGAG
CTACGACGACACCGACGACCAAGATTCCTCCCTTTTTTTCCCCCTCCCCG
GGCTCCTCTCCTCTCTCTTTCCTCCCGCGGCCCCGGGCTCGATGGATATG
GAGGACGGCACGGAGCCTACCCTCGTGGTCCTGTCCCCTCCCTCCTCCTC
AGACCCCACCACTGCCTCCACCTCCCCCTTTGCCGCCATGAACGCCTTGG
TCAACAGCTTCTTCAACTCCTTCCCCGCCCCTCCCCCCCCTCCCTCCTTT
CCCCCCGGCGTCCCTCCCCCCCCGCCTGGGACCACCGTGGTCGTGGAGAC
CCTCCGTGACGAGACGGGCAAGACCACTGAGTCCTTTTACGTGGTCGACG
CAGAGAGCGGGGAGAGGGAGAAGGTGGGGGAGACCGTGGCCCCAGCGGAG
GAGGCTTCTGGCACAGAGACGCCGGAGGGAGGATTCATGAAGAGCGTGTA
CAGCTATGTGGTCCCGGAGGAGGGGGAGGACGCCGCTCAGCCGCTACAGT
TGAAGAGCGCCCCTCCTGCTCCCTCGGCCGGAGGCTCCCAGACAGGGCGA
GGCGATGGGACGCACCACGTCCTCCTGGTGCTGGTGGGGGTGGGGGTGGG
GGCTGCCTTTGTGGCCCTGGCCCTGGCCTTCTTTGCCATGAGGCGGGGGA
GGATGGAGGGGGAGGATGAGACGGCAGGGAGCTTGGGCCGACGGCGACAG
CAGCAGGAGCCCCTCTTGTACCTTCCTCCGGGGGGCGAAGAGGAGAGGGT
GGTACGGGCGCACGTGGTGAAAGCGGATGCCCCAGAGCCTCTGGAGGTTT
AATAACGGTACGAAATTTGGGCGTGATATCGAATGAACGACTTGCAATTG
ACGCAAAAAAGCGGATTGGTAGCGGAGGGAGAAGGTATCGGGGTAGAGGG
ATAGAGAGAAGGGGGAGGAGCGCGCCGATAGCGCGGTGGAAGCCAGGGGA
GGGCCTTCGAAAGGGATCCCAGAGAGAATTGAGAGCGACGGCCACATCCA
TCGTGTTACGCCTGTCTCGAATCTTGTCACCTTAAGTCAGGACAGAGGGC
GTGAATGGCACAAGGCACGCAGAAGTGGTCGGCGAGAGACACGGTCTCGG
AGCCCCCATCCCGTCCTCCGCCCTGAAGGCGCAAAGAAAAGCAACAATCG
ACCCTCCTCGCGATGTTCTGGAGGGGCCGTGCCCTTCAACATGAA back to topprotein sequence of rna5855 >rna5855-protein ID=rna5855-protein|Name=rna5855|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIG
FNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARL
HEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAK
GRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAA
FRPAAGSLEGPAGGGW back to topmRNA from alignment at CM002466.1:1000742..1002730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5855 ID=rna5855|Name=rna5855|organism=Nannochloropsis gaditana|type=mRNA|length=1989bp|location=Sequence derived from alignment at CM002466.1:1000742..1002730- (Nannochloropsis gaditana)
CTTGTCAATTATCCCACCAGCTATTTCCACCAACATGGCTCCCTTTTACC
CTTTTCGAACGTTCACAGCATTAAAAAAATATGGGACAGCTCATGACGCG
GGTCCTTGACGTCCTTTGGGGCAAAGAAGACAGGTAAATGACACAAAAAC
CTAGAAGGGAGGAGACTGGGGAGGCTTGAGGTACCTCCTACCAGTACGGG
ACTAAAACCCCCGTGTGCCGGGGACAGACACCTGAAAATAATCATTGTGT
ACGTCTACCCCCAAAAATCAACGACAGACGTTTGTTGATGCTGGGCCTCG
ACGCGGCGGGAAAGACCACCATCCTCTACCGCCTCCAGCTGGGCGAGGAC
GTGCACTCCATCCCCACGATCGGGTAGGTCGACATAGGCAGTGGCCCCTG
CCGCGTGACAGCGAGTGAAAATCATGCTATGAATTACATGTTTTACGAGT
GTGCTTATGCAGCTAATGGCAATGGTCCGTGCATTGCAGTCGCCGCCTTA
CCGTGACTGTACCGCTCAGGGTCTTGCTTGATCTAGGCTCCTGCCCCCTT
GCCTAACCCATCCTCTTGCATCGACCACCCTGCTAGGTTCAACGTTGAGA
AAGTCGAGTATCGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAA
GATCGCTTGCGAAAGTAGGTGCAGATGGAAAGGGAGGAAAAGGGGAGGCA
AAAAAGAGGGCGGGAAGGAAGCCGGTCGGTATTTGTTCTCGAACATTCAC
ATTTCTTCTCAATCTAGGCTATGGCGGCACTACTACAAGGACAACGACGC
CCTCATCTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGC
GGTCCGAACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATC
CTCCTTGTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCA
AGAAATGGCGCGGCTGTTGCAATTAGACAATGTAGGGGCTCTTTTGGAGG
GAGGGAGGGAGGAAGGGAAAGGATACAGAGATGTGGACAGAGACGCGGAC
CATTATTTGAGAGAGGATGAAGGCTCCCTTGTGATGCTTTGTCGGCCGCT
TGATGAGCTCACTCTGTGTATTGTTTAGTCCCATTGACTGCTTTGAACTG
GATTTTGACTCCCCTCTCGCCGGCCTCCCCGTGCCCTCCAACCCTTTCCT
GCCCCCCTCTCCCCGTCCCGCCCTCCCTCCCTCCTCCCCTCCGCCTCCCC
AGGTCGCCAAGGGCAGGCCATGGTACATTCAACCTTCGTGCGCAATGACC
GGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCTCCGAGAAACTCAAGGC
GCGTCAAGGGCCCTCCCCGCCCCTCCCTCTCTCCCCCCCTCCGTCCCTCC
CTCCTTCCCGTCCTCCCAGATCCTCACACTTTCCTATGCGTTGGATTGAC
GGGTCTCTTTCCTCCTGTCTTGTCTTTGTGGCCTCCCTCTGACTCTTTCT
CTCTGTCTCTGTTTCTTGACAGGAGGTGGGCTCTCACACGTATCACGGGA
TCAGACAGGACGAGACGATCCAGCCGGCAGCTGCCTTTAGACCGGCCGCG
GGCTCGTTGGAAGGGCCTGCGGGGGGGGGATGGTAGGAGCGGAAGGAGGA
CAGGAGGAAGGGAGGGAGGATGTGCGGTAGGAGGACGCGAGGGAGGGTGG
AAGGAGGGCAGGAACCAGTTTGCCCCGCCGCCTGGAGCGATGAGGGTTCA
GGGGGGCGAGTGGTTGGGAGGAAAGCGAGAGGACGTGCACCTGGCGGTGG
CCGAGTGTGGTTTGGGGCTGTTGGGTTTGCTGGGGGAGGCTTCTGTGTCG
ATAGAAGGAGGGAGAGAAGGCGGCGGAGGGATCGGGGGCGGGGGGAGGGG
GAAGGACCCACAACAGAAGCGTACAACATAGACAGGGCGAGCGTCGGGAA
GGGGACCGACAGAAAGCTGACAGAAATAATTCATGTTGA back to topCoding sequence (CDS) from alignment at CM002466.1:1000742..1002730- >rna5855 ID=rna5855|Name=rna5855|organism=Nannochloropsis gaditana|type=CDS|length=3906bp|location=Sequence derived from alignment at CM002466.1:1000742..1002730- (Nannochloropsis gaditana)
GAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACGATCCA
GCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCCTGCGG
GGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAACCTTCG
TGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCTCCGA
GAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCCTCATC
TTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGGTCCGA
ACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCTCCTTG
TCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAGAAATG
GCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGAGTATC
GGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCTTGCGA
AAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACCATCCT
CTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGATCGGAT
GGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGAAGACA
GGAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACGATCC
AGCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCCTGCG
GGGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAACCTTC
GTGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCTCCG
AGAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCCTCAT
CTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGGTCCG
AACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCTCCTT
GTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAGAAAT
GGCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGAGTAT
CGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCTTGCG
AAAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACCATCC
TCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGATCGGA
TGGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGAAGAC
AGGAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACGATC
CAGCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCCTGC
GGGGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAACCTT
CGTGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCTCC
GAGAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCCTCA
TCTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGGTCC
GAACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCTCCT
TGTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAGAAA
TGGCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGAGTA
TCGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCTTGC
GAAAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACCATC
CTCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGATCGG
ATGGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGAAGA
CAGGAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACGAT
CCAGCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCCTG
CGGGGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAACCT
TCGTGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCTC
CGAGAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCCTC
ATCTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGGTC
CGAACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCTCC
TTGTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAGAA
ATGGCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGAGT
ATCGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCTTG
CGAAAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACCAT
CCTCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGATCG
GATGGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGAAG
ACAGGAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACGA
TCCAGCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCCT
GCGGGGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAACC
TTCGTGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTCT
CCGAGAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCCT
CATCTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGGT
CCGAACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCTC
CTTGTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAGA
AATGGCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGAG
TATCGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCTT
GCGAAAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACCA
TCCTCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGATC
GGATGGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGAA
GACAGGAGGTGGGCTCTCACACGTATCACGGGATCAGACAGGACGAGACG
ATCCAGCCGGCAGCTGCCTTTAGACCGGCCGCGGGCTCGTTGGAAGGGCC
TGCGGGGGGGGGATGGTAGGTCGCCAAGGGCAGGCCATGGTACATTCAAC
CTTCGTGCGCAATGACCGGTGACGGCCTGGTCGAGGGCCTGGACTGGCTC
TCCGAGAAACTCAAGGCTATGGCGGCACTACTACAAGGACAACGACGCCC
TCATCTTCGTCATCGATTCTGCCGACCGCGCGCGCCTGCACGAGGCGCGG
TCCGAACTCCACCACTTGCTCTCTGAGCCCCAGCTCCTGGACTCCATCCT
CCTTGTCTACGCCAACAAGGCAGATTTACCGCAGGCGATTTCCGTGCAAG
AAATGGCGCGGCTGTTGCAATTAGACAATGTTCAACGTTGAGAAAGTCGA
GTATCGGAATATTTCGTTCACAATTTGGGACGTTGGAGGTCAAGATCGCT
TGCGAAAACGTTTGTTGATGCTGGGCCTCGACGCGGCGGGAAAGACCACC
ATCCTCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCCACGAT
CGGATGGGACAGCTCATGACGCGGGTCCTTGACGTCCTTTGGGGCAAAGA
AGACAG back to top
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