EWM24831.1, cds5840 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|585106427|gb|EWM24831.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 442.58 bits (1137), Expect = 3.398e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAAFRPAAGSLEGPAGGGW 216 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAAFRPAAGSLEGPAGGGW Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGSHTYHGIRQDETIQPAAAFRPAAGSLEGPAGGGW 216
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|585106428|gb|EWM24832.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 298.901 bits (764), Expect = 9.230e-101 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVA 149 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVG 149
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|585106430|gb|EWM24834.1| (adp-ribosylation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 288.886 bits (738), Expect = 7.723e-97 Identity = 145/185 (78.38%), Postives = 158/185 (85.41%), Query Frame = 0 Query: 1 MGQLMTRVLDVLW---GKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG L++RVLD L GK+++R+LMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVE V Y+NI FTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADR R EA++EL LLSE QL S +LV+ANKADLP AI V E+A+LLQLD AKGR WYIQPSCA TGDGLVEGLDWLS KLKE G Sbjct: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAG 185
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|242769202|ref|XP_002341722.1| (ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500] >gi|218724918|gb|EED24335.1| ADP-ribosylation factor, putative [Talaromyces stipitatus ATCC 10500]) HSP 1 Score: 238.81 bits (608), Expect = 4.128e-77 Identity = 109/182 (59.89%), Postives = 148/182 (81.32%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG +++R+LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EAR EL +L+E +L D++LLV+ANK DLP A+S+ E+ + L L ++ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLVVSRLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|212542639|ref|XP_002151474.1| (ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >gi|212542641|ref|XP_002151475.1| ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >gi|210066381|gb|EEA20474.1| ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >gi|210066382|gb|EEA20475.1| ADP-ribosylation factor, putative [Talaromyces marneffei ATCC 18224] >gi|679995264|gb|KFX47728.1| ADP-ribosylation factor [Talaromyces marneffei PM1]) HSP 1 Score: 238.424 bits (607), Expect = 5.137e-77 Identity = 108/182 (59.34%), Postives = 148/182 (81.32%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG +++++LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EAR EL +L+E +L D++LLV+ANK DLP A+S+ E+ + L L ++ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGMVVSKLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|1147822160|ref|XP_020120324.1| (ADP-ribosylation factor [Talaromyces atroroseus] >gi|748552613|dbj|GAM41493.1| ADP-ribosylation factor [Talaromyces cellulolyticus] >gi|1118539970|gb|OKL60203.1| ADP-ribosylation factor [Talaromyces atroroseus]) HSP 1 Score: 237.654 bits (605), Expect = 1.057e-76 Identity = 108/182 (59.34%), Postives = 148/182 (81.32%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG +++++LD LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EAR EL +L+E +L D++LLV+ANK DLP A+S+ E+ + L L ++ + R WYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGLVVSKLLDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSIAEITQQLGLQSLTR-RAWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|669160266|ref|XP_008615695.1| (ADP-ribosylation factor 1 [Saprolegnia diclina VS20] >gi|530732715|gb|EQC30957.1| ADP-ribosylation factor 1 [Saprolegnia diclina VS20]) HSP 1 Score: 237.269 bits (604), Expect = 1.388e-76 Identity = 112/180 (62.22%), Postives = 140/180 (77.78%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKE 180 MG L +RV+D L+ K+D R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE +EY+NI+FT+WDVGGQD++R LWRHYY + LIFV+DS DR R+ +AR ELH +L++ +L D+I LV+ANK DLP ++S EM L L GRPWYIQ CA TGDGL EGLDWLS LK+ Sbjct: 1 MGMLFSRVMDRLFSKQDVRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETLEYKNINFTVWDVGGQDKIRPLWRHYYDNTRGLIFVVDSNDRDRIDQARDELHRMLAQDELRDAITLVFANKQDLPNSMSAAEMTEKLGLRTF--GRPWYIQACCATTGDGLYEGLDWLSATLKK 178
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|1111710701|gb|OJI97368.1| (hypothetical protein ASPVEDRAFT_49389 [Aspergillus versicolor CBS 583.65] >gi|1111895501|gb|OJJ63565.1| hypothetical protein ASPSYDRAFT_53235 [Aspergillus sydowii CBS 593.65]) HSP 1 Score: 237.269 bits (604), Expect = 1.550e-76 Identity = 109/182 (59.89%), Postives = 146/182 (80.22%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG ++R+ D LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EAR EL +L+E +L D++LLV+ANK DLP A+S E+ + L L ++ + RPWYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGIAISRLFDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RPWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|972234267|emb|CEN62826.1| (Putative ADP-ribosylation factor (Broad) [Aspergillus calidoustus]) HSP 1 Score: 237.269 bits (604), Expect = 1.674e-76 Identity = 109/182 (59.89%), Postives = 146/182 (80.22%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182 MG ++R+ D LWGK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NI FT+WDVGGQD++R LWRHY+++ +IFV+DS DR R+ EAR EL +L+E +L D++LLV+ANK DLP A+S E+ + L L ++ + RPWYIQ +CA TGDGL EGL+WL+E L++ G Sbjct: 1 MGIAISRLFDRLWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIIEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTR-RPWYIQSTCATTGDGLYEGLEWLAETLRKTG 181
BLAST of EWM24831.1 vs. NCBI_GenBank
Match: gi|209876175|ref|XP_002139530.1| (ADP-ribosylation factor 1 [Cryptosporidium muris RN66] >gi|209555136|gb|EEA05181.1| ADP-ribosylation factor 1, putative [Cryptosporidium muris RN66] >gi|1098430061|gb|OII77910.1| ADP-ribosylation factor 1 [Cryptosporidium andersoni]) HSP 1 Score: 237.269 bits (604), Expect = 1.787e-76 Identity = 112/183 (61.20%), Postives = 142/183 (77.60%), Query Frame = 0 Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVGS 183 MG +T++ L+GK+D R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR R+++AR EL +LSE +L D+ LLV+ANK DLP A+S ++ LQL N+ + R WYIQ +CA +GDGL EGLDWLS L S Sbjct: 1 MGLALTKIWRNLFGKKDMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERINDARDELARMLSEDELRDAALLVFANKQDLPNAMSATDVTEKLQLSNI-RNRHWYIQSTCATSGDGLYEGLDWLSRTLASKSS 182 The following BLAST results are available for this feature:
BLAST of EWM24831.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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