jgi.p|Nanoce1779_2|613545, gene_10668 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|613545
Unique Namegene_10668
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_76:861..3306 +

Link to JBrowse

Properties
Property NameValue
TranscriptId613631
ProteinId613545
Product nameVRR-NUC domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:861..3306 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL098ncniL098Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01230NO06G01230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613545mRNA_10668-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613545mRNA_10668Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|613545

>mRNA_10668-protein ID=mRNA_10668-protein|Name=jgi.p|Nanoce1779_2|613545|organism=Nannochloropsis oceanica|type=polypeptide|length=622bp
MVPTIAASSSSSSQVLIELSDEEEEEKSGTGNHHHHHQPQQQRHISTATR
SPSSFQPLGPSFIPPSYAQLFDSSLSLADAFEQAVVAGDAVTAYSCLHAV
SNLFLPPPPFQEEQAHEQKRDRTPLLSSLSTLEEDRASSSSGGGCSGDGR
GVEVHRLVPPPTYRGLHDLPRVLFKLLSAVMGRGISLLERERKYGQAVHY
LRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVD
GEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDG
EGKISSLEDGVLACLLEEEEEEGEGRWGSHEEEEDGVTVKAKVDERVGGR
AGRRGGRKEGNCQWQGAHCENNIILTLFGLLCWDVLWLATAETERQQQQQ
SSPATFTRSSSNSSESSTSSSKSSSSPSEYQHAPSDLMLCQEFLLSPARR
RALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQG
FGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLS
WAQKYWIDKLVGVGVRVEVARVVNGEEEKDGKWDARGGKRGRRVGGGRKG
RGGGGRGGGWRTGAEVRKGRE*
back to top
Synonyms
Publications