NO06G01230, NO06G01230 (gene) Nannochloropsis oceanica

Overview
NameNO06G01230
Unique NameNO06G01230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3303
Alignment locationchr6:392819..396121 -

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Properties
Property NameValue
DescriptionFanconi-associated nuclease 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:392819..396121 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0036297interstrand cross-link repair
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0036297interstrand cross-link repair
GO:0006974cellular response to DNA damage stimulus
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0016788hydrolase activity, acting on ester bonds
GO:0046872metal ion binding
GO:0016788hydrolase activity, acting on ester bonds
GO:0016787hydrolase activity
GO:0004528phosphodiesterase I activity
GO:0004518nuclease activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR033315Fan1-like
IPR014883VRR_NUC
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO06G01230 vs. NCBI_GenBank
Match: EWM26169.1 (fanconi-associated nuclease 1 [Nannochloropsis gaditana])

HSP 1 Score: 737.6 bits (1903), Expect = 5.400e-209
Identity = 453/1012 (44.76%), Postives = 553/1012 (54.64%), Query Frame = 0
Query:   71 AWGKLIDEEAAAKVILQRFLGYHPPATRRLFTASYRGTFNDRHNAVPGVGRASSFGRYGSGVRSSLNCTGCLGLTWNSGDIGNESPEAASQWXXXXXXXXXXXXXXXI-ADIADAVGSAP-----------KALRNFCVVLDWALKHSEILKNCPQDVARLEALRQDLTPSAADLFWRCFHRARAVCRVSLQQEHQQWQGKRGDRSATAMHSSSKGSNDKHDTCALLQELVGKQAILDVTQNETILLTHLYDVFAALRADELIRLNNFLFGSAGXXXXXXXXXXXXXXXXXXSLGGKRGSATRDDSLATIDNFISQCQRERDPILLRRKLGKDLIKWLGKD--XXXXXXXXXXXXXXFRLVCVEPALAKLLQRVFALFFMTNGYDAEDAVVLLWNDLGGLRVVGRKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATRSPSSFQP-----LGPSFIPPSYAQLFDSSLSLADAFEQAVVAGDAVTAYSCLHAVSNLFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSGDGRGVEVHRLVPPPTYRGLHDLPRVLFKLLSAVMGRGISLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSLEDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLS-PARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKE------VRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARVVNGEE 1057
            AWG+LIDE++ AKV LQRFLG+ PP  R  +TA YRG FNDR NAVPG+G AS FGRYGSGVRS LN +GC   T++S  + +       Q                +  +  D V S P           K+ RNF  +L+WAL+ SE+LK+C QDV  L+ LR  L+P AA L W+CFH  RA+CRV +Q+E     GK+     T +   S   ND       LQELV +Q + DVT ++  LL HLYDVFAALRADEL R+   LFGSA                   S  G+R +A+R+ SL ++  F+ +CQ+E  P  +RRKLG DL+KWL K+                FRLVC+ P LAKLLQR+FALFFMTNGYDAEDAVVL WNDL  LR   R  V                                                              A R P S  P     LG   IP +Y Q  D++LSL+DAFE AV +GD+ TAY+CLH VS+LFLP                                            G    +L  P  YRGL +LP +LFK+L+ V+GRGI LLER+RK+ QAVHYL+I+L+G+  L WSLRG+FH RLVLDL H NRPG+AL ACE ALAD  VDGEDRLFLQ KC +LAV PRRWKKP FP L +APV+ L+MA VQ  R++   GK  SLED VLACLL+          G      +    +A                      W+GAH EN ++L+LFG+LCWDVLW A                                          HAP DL   + FL S P R  AL +VLAR++RGE+ A+LAE H ++ GTLCLG+DW +F L  LQT+A+  G  ALMLLCETL +DYSLL+HGFPDL+LW++ G        VRLVEVKGPGDSLSWAQKYWIDKL+GVGVRVEVARVV G E
Sbjct:   68 AWGRLIDEQSTAKVALQRFLGFSPPLLRHAYTACYRGVFNDRFNAVPGMGIASIFGRYGSGVRSILNVSGC--STFSSRSVEHAEGLVRDQGRSDGQAILNPEVIQDVEGEEDDDVSSLPNGNAQGAKFWNKSHRNFNFILNWALECSEVLKSCRQDVQDLQKLRVGLSPEAATLLWQCFHSPRAICRVHVQRE-----GKK-----TIVKGKSSDRNDN----GALQELVKQQVVRDVTGDQGALLMHLYDVFAALRADELARMTLCLFGSAA------AATSAVSSSLPCSWRGRR-NASREASLKSLSTFLERCQKEGSPERVRRKLGHDLVKWLAKETQAPLQVKGEQQQQQSFRLVCLAPRLAKLLQRLFALFFMTNGYDAEDAVVLWWNDLETLRFASRGDV---------------------DGAGQGRSGEGLLPFASRGPSTSTKSSADDENQEAEATIQKAERPPRSELPVAWPGLGSPEIPCAYRQFADTTLSLSDAFEAAVASGDSATAYACLHTVSDLFLPRPMLPAHASGSVVSDPACTSLAALEVTQVK-------------TGTHRFQLDVPAEYRGLEELPGILFKVLARVIGRGIGLLERDRKHAQAVHYLKIILDGSEPLPWSLRGHFHSRLVLDLVHCNRPGEALAACEHALADPRVDGEDRLFLQAKCLSLAVAPRRWKKPTFPALQTAPVLELKMAEVQGWRQK---GK--SLEDSVLACLLQREGDGMAGREGCFPGVREEDPQQAG--------------------HWRGAHWENGLMLSLFGILCWDVLWSAQPAHSEKESILATSSQGANGGRPDCRTRSSRGTRSTQSCRYQHAPCDLQHNRGFLKSCPGRVSALEQVLARIQRGESGALLAENHARYHGTLCLGIDWTTFSLPVLQTVAEALGSSALMLLCETLIRDYSLLSHGFPDLLLWRDAGPHGGMPAMVRLVEVKGPGDSLSWAQKYWIDKLLGVGVRVEVARVVEGNE 997          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: XP_005845068.1 (hypothetical protein CHLNCDRAFT_137359 [Chlorella variabilis] >EFN52966.1 hypothetical protein CHLNCDRAFT_137359 [Chlorella variabilis])

HSP 1 Score: 167.9 bits (424), Expect = 1.700e-37
Identity = 131/412 (31.80%), Postives = 178/412 (43.20%), Query Frame = 0
Query:  663 GISLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVF--PVLMSAPVVRLEMAMVQRRRERDGEGKISSLEDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARVVNGEEEKDGKWDARGGKRGRR 1073
            G+ LLER+++Y +AV  L ++L G      + RG +  RL ++L H  R  +ALE  E+ALAD  +   DRL +Q +   L  PP RWK P +        PVVR++   +   R    + +   L++    C +EE           H   E+G                           WQG HCE  +   LFGLL WDVL++                                            AP DL      L  P R+ A+   LARV  GEAP MLA    QH GT+C GV W    LE LQ +A+  G   L  +C  LA D+   + G PDL+LW+   ++ +L EVKGP D LS  Q+ WI+ L   G   EV +V    EE      + G K+ RR
Sbjct:  667 GVDLLERQKRYKEAVQRLDMLLGGCCCP--TRRGEWWERLSINLKHLGRHQEALERAEAALADEALSCGDRLTMQRRVLLLGKPPWRWKTPAWKKEAQREPPVVRIQGRPL--NRTTGAKSRFYGLDEE--QCGVEELAL-------QHYATEEG-------------------------GGWQGVHCEGGVWAMLFGLLLWDVLFMPVPDVFRTPFQT--------------------------------APLDL---DTPLFYPTRKEAVKACLARVAAGEAPRMLAAAWEQHEGTMCRGVRWDRHELEELQVVAECVGGRQLAAVCRLLAIDHGGWSGGMPDLLLWRPARRDAKLAEVKGPRDRLSNQQRAWINALRDAGFHAEVLKV----EEP----SSHGSKKQRR 997          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: PRW59254.1 (fanconi-associated nuclease 1-like protein isoform X1 [Chlorella sorokiniana])

HSP 1 Score: 163.3 bits (412), Expect = 4.200e-36
Identity = 125/400 (31.25%), Postives = 167/400 (41.75%), Query Frame = 0
Query:  663 GISLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAV-------PPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSLEDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARVVNGE 1056
            G+SLLER+++Y +A+  L  +L G   L  S RG +  RL  +L H  R   ALE  E+ALAD  +   DRL LQ +   LA         PRRW  P +    +     + +           + +    +D    C +EE           +   EDG                           WQG H E  I  TL+GLL WDVL++                                            AP DL      L  P R+ A+ E L R+  G+APAML     QH G +C GV+W    LE LQ IA+  G P L  +C  LA+D+   + G PDL+LW  G +  RL EVKGP D LS  Q+ W+  L   G++ EV +VV  E
Sbjct: 1332 GVSLLERQKRYQEAIDRLHQLLGGACCL--SRRGDWWTRLATNLVHLKRKNQALEQVETALADDWLSRGDRLGLQRRWLRLAKEPANAGGAPRRWVVPPWAKAANWEPPEVRIVGWPLNNTTGTKSRFYGFDDA--QCTVEELAL-------QYYATEDG-------------------------GGWQGVHSEGGIWATLWGLLLWDVLFMPVPDVFRTPFQT--------------------------------APLDL---DTPLFYPTRKDAIEECLGRISAGQAPAMLRSAWQQHRGVMCRGVNWERHSLEDLQLIAECIGGPGLAQVCRLLAQDHGGWSGGMPDLLLWHAGRRAARLAEVKGPRDRLSDQQRAWMAALSEAGLQAEVLKVVEPE 1660          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: PSC75645.1 (fanconi-associated nuclease 1-like protein isoform X1 [Micractinium conductrix])

HSP 1 Score: 162.2 bits (409), Expect = 9.500e-36
Identity = 129/411 (31.39%), Postives = 178/411 (43.31%), Query Frame = 0
Query:  663 GISLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSLEDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARVVNGEEEKDGKWDARGGKRGRRV 1074
            G+SLLE ++++ +AV  L  +L G      + RG ++VRL  DL H  RPG++LE  E AL+D  +   DRL LQ +   L  PPRRWK+P +    +A    LE+ +  R        K          C +EE           +  EE G                           W+G H E  I  TLFGLL WDVL++                                            AP DL     +    AR+ A+   LA V  G+AP +L  +   H GTL  GV+W    LE LQ +A+  G  AL  +C  LA+D++  + G PDL+LW+   ++ +L EVKGP D LS  Q  W++ L   G+  EV +VV  E        A GG R RR+
Sbjct:  556 GVSLLECQQRHAEAVRRLEQLLGG--RCCPNRRGDWYVRLTTDLEHLKRPGESLERAEKALSDGWLSNGDRLALQRRILRLGKPPRRWKRPHW--AEAAQHEALEVRIEGRPLNNTLGVKSRFYGPNDEQCTVEELALQY------YAGEEGG--------------------------GWRGVHSEGGIWATLFGLLLWDVLFMPAPDVFRTPFQT--------------------------------APLDLDTPGFY---EARKGAVEACLAHVAAGDAPRLLRASWEAHEGTLARGVNWERHSLEELQLVAECIGGAALAGVCRLLARDHAGWSGGMPDLLLWRPDRRDAKLSEVKGPRDRLSTQQIAWMNALDAAGLHAEVLKVVEPETA------AAGGGRKRRL 889          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: EFJ10355.1 (hypothetical protein SELMODRAFT_427181 [Selaginella moellendorffii])

HSP 1 Score: 161.0 bits (406), Expect = 2.100e-35
Identity = 124/389 (31.88%), Postives = 171/389 (43.96%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++ L+ +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + ++  +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L ++C+ LA+D+S    G PDL+LWKE  KE RL EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  453 SFLEKERRYAEAINLLKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLKK---KHKVVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSNWTAGMPDLLLWKE--KEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 766          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: XP_024518096.1 (fanconi-associated nuclease 1 homolog [Selaginella moellendorffii])

HSP 1 Score: 161.0 bits (406), Expect = 2.100e-35
Identity = 124/389 (31.88%), Postives = 171/389 (43.96%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++ L+ +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + ++  +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L ++C+ LA+D+S    G PDL+LWKE  KE RL EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  548 SFLEKERRYAEAINLLKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLKK---KHKVVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSNWTAGMPDLLLWKE--KEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 861          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: EFJ19666.1 (hypothetical protein SELMODRAFT_418853 [Selaginella moellendorffii])

HSP 1 Score: 160.6 bits (405), Expect = 2.800e-35
Identity = 123/389 (31.62%), Postives = 170/389 (43.70%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++  + +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + ++  +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L ++C+ LA+D+S    G PDL+LWKE  KE RL EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  518 SFLEKERRYAEAINLFKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLKK---KQKVVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSNWTAGMPDLLLWKE--KEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 831          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: XP_024540127.1 (fanconi-associated nuclease 1 homolog isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 160.6 bits (405), Expect = 2.800e-35
Identity = 123/389 (31.62%), Postives = 170/389 (43.70%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++  + +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + ++  +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L ++C+ LA+D+S    G PDL+LWKE  KE RL EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  559 SFLEKERRYAEAINLFKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLKK---KQKVVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSNWTAGMPDLLLWKE--KEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 872          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: XP_024540128.1 (fanconi-associated nuclease 1 homolog isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 160.2 bits (404), Expect = 3.600e-35
Identity = 123/389 (31.62%), Postives = 169/389 (43.44%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++  + +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + +   +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L ++C+ LA+D+S    G PDL+LWKE  KE RL EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  559 SFLEKERRYAEAINLFKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLK----KKQKVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSNWTAGMPDLLLWKE--KEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 871          
BLAST of NO06G01230 vs. NCBI_GenBank
Match: XP_024518088.1 (fanconi-associated nuclease 1 homolog isoform X3 [Selaginella moellendorffii])

HSP 1 Score: 158.7 bits (400), Expect = 1.000e-34
Identity = 122/389 (31.36%), Postives = 169/389 (43.44%), Query Frame = 0
Query:  665 SLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHVRLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRWKKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSL--EDGVLACLLEEXXXXXXXXWGSHXXEEDGVTVKAKVDXXXXXXXXXXXXXXXXNCQWQGAHCENNIILTLFGLLCWDVLWLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAETHGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLAHGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVARV 1052
            S LE+ER+Y +A++  + +L  +       RGY+ +RL +DL H  R  ++L   E+ L D  V G DR+ LQ +   L  PPRRWK P +  L+     + ++  +  R   +  G  S     DG   C +E+           +   EDG                           W+G H E+ I LTLFGLL WDV++                                             AP D  LC +    P R   +   L  ++ G A  ++AET  +H GT C GV+W  + LE LQTI    G P L  +C+ LA+D+S    G PDL+LWKE  KE +L EVKGPGD LS  Q  W   L    V VE+ +V
Sbjct:  559 SFLEKERRYAEAINLFKQLL--SMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGKPPRRWKVPPYAALLKK---KQKVVTIMGRPLNNANGMKSRFYGYDG-QQCSVEDLAL-------QYYAGEDG-------------------------GGWKGVHSESGIWLTLFGLLMWDVIF--------------------------------SDVPDVFQTPFQTAPLD--LCTDSFY-PVRSSLIESRLQAIRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSAICKLLAEDHSNWTAGMPDLLLWKE--KEAKLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKV 872          
The following BLAST results are available for this feature:
BLAST of NO06G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26169.15.400e-20944.76fanconi-associated nuclease 1 [Nannochloropsis gad... [more]
XP_005845068.11.700e-3731.80hypothetical protein CHLNCDRAFT_137359 [Chlorella ... [more]
PRW59254.14.200e-3631.25fanconi-associated nuclease 1-like protein isoform... [more]
PSC75645.19.500e-3631.39fanconi-associated nuclease 1-like protein isoform... [more]
EFJ10355.12.100e-3531.88hypothetical protein SELMODRAFT_427181 [Selaginell... [more]
XP_024518096.12.100e-3531.88fanconi-associated nuclease 1 homolog [Selaginella... [more]
EFJ19666.12.800e-3531.62hypothetical protein SELMODRAFT_418853 [Selaginell... [more]
XP_024540127.12.800e-3531.62fanconi-associated nuclease 1 homolog isoform X1 [... [more]
XP_024540128.13.600e-3531.62fanconi-associated nuclease 1 homolog isoform X2 [... [more]
XP_024518088.11.000e-3431.36fanconi-associated nuclease 1 homolog isoform X3 [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR098ncniR098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01230.1NO06G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613545gene_10668Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100121g2gene4352Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01230.1NO06G01230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01230 ID=NO06G01230|Name=NO06G01230|organism=Nannochloropsis oceanica|type=gene|length=3303bp
ATGAAACGGGCGGCGTTGGAAAAAAAAAGCAGTGTCAACGAGGATGACCA
CGACCATGAGGTAGAGATCATAGAGATGCTGCCTAGTCAAGGCAAGAAAA
GAAAATCAAGCACGCTGTTTGGGTATGGGTTTGGCGGGAATTCCAGCAGC
ACCAGCAGCGCCACTGCGGCCGACTGCCCTCCCTCCTTGCCTCCTCTCTC
TCCTCCTCCGGCCTGGGGCAAGCTCATCGATGAAGAAGCTGCCGCCAAGG
TGATATTGCAGCGATTTCTGGGCTATCATCCACCTGCGACACGGCGTCTT
TTTACAGCATCTTACCGAGGCACCTTTAATGACAGGCATAACGCGGTGCC
GGGCGTGGGCCGTGCTTCGAGCTTTGGACGGTACGGATCTGGCGTTCGTA
GCTCCCTAAACTGCACAGGGTGTTTAGGTCTGACATGGAATAGTGGTGAC
ATTGGTAACGAGAGTCCCGAGGCTGCTTCGCAGTGGGAGCAAGACCAAGA
TGACGACGACGAGGGGGGTGGGGACGAGGAGATTGCCGACATTGCGGATG
CTGTGGGATCTGCGCCCAAGGCCCTGCGTAATTTTTGCGTGGTTCTTGAC
TGGGCACTAAAACATTCGGAGATCCTCAAGAACTGCCCTCAAGACGTTGC
CCGGCTGGAGGCGCTGCGACAGGATTTGACGCCGTCAGCGGCGGATCTGT
TTTGGCGGTGCTTCCACCGGGCACGGGCTGTTTGCCGGGTTTCGTTACAG
CAGGAGCACCAGCAATGGCAGGGGAAGAGGGGTGATAGAAGTGCCACTGC
TATGCACAGCAGCAGCAAAGGTAGCAATGATAAGCACGATACATGTGCGC
TTCTTCAAGAGCTAGTGGGCAAACAGGCCATCCTAGACGTGACACAAAAT
GAGACAATTTTACTAACGCACTTGTACGATGTCTTTGCCGCTCTACGTGC
CGACGAGTTGATACGTCTCAATAATTTCTTATTCGGCTCTGCTGGAGCTT
CTAGCGCTGCCTCTGCTACTGCTGCCAATGCTGTTGCCTCCTCCTTCTCT
TCACTGGGCGGAAAGCGTGGAAGCGCTACACGGGATGACTCCCTCGCGAC
CATTGACAATTTTATTTCTCAGTGTCAGAGAGAGCGCGATCCCATCCTCC
TCCGAAGAAAGCTTGGAAAAGACCTGATCAAGTGGCTCGGCAAGGACGTA
GGGAAGCAACAAAAGAAGCAGCAGCAGCAGCAACAGGCTTTTCGACTGGT
GTGTGTGGAGCCAGCGTTGGCCAAGTTGTTGCAGCGGGTTTTCGCCTTAT
TTTTTATGACGAATGGCTATGATGCCGAGGATGCGGTGGTGTTATTGTGG
AATGATTTAGGAGGGCTGCGGGTTGTTGGCAGAAAAGGAGTAGGGGATGG
TGGTGGTGGTGGTGGTAGAGGAGGGGAAGGGTGGGGAATGGTGCCAACCA
TTGCTGCATCCTCATCGTCCTCGTCGCAGGTATTGATTGAGCTTAGTGAT
GAAGAGGAGGAAGAGAAAAGTGGCACTGGGAATCATCATCATCATCATCA
GCCGCAGCAGCAGCGACATATCTCTACAGCAACTCGCTCGCCGTCATCCT
TCCAACCCCTCGGTCCTTCCTTCATCCCTCCTTCCTACGCCCAGCTCTTC
GATTCCTCCTTATCCCTAGCTGACGCGTTCGAGCAAGCCGTGGTAGCAGG
AGACGCAGTGACAGCCTATTCATGCCTCCACGCTGTCTCGAATCTATTCC
TCCCTCCTCCTCCTTTTCAGGAGGAGCAAGCGCACGAGCAGAAACGCGAC
CGCACACCTTTACTTTCTTCCCTCTCCACTTTAGAAGAAGACAGGGCCTC
TAGCAGCAGCGGCGGCGGTTGTAGTGGTGATGGTCGAGGGGTGGAAGTTC
ATCGTCTGGTGCCTCCACCCACCTATCGAGGTTTGCACGATTTACCCCGC
GTTCTCTTCAAATTGCTTTCGGCAGTGATGGGAAGAGGGATTAGCTTATT
GGAACGTGAACGGAAATACGGACAAGCGGTGCATTATCTGAGGATTGTGC
TAGAGGGAACTTCGAATTTGAGGTGGTCGTTAAGAGGATATTTTCATGTA
CGGTTAGTGCTGGATTTGGGCCATAGCAACCGACCGGGGGATGCGTTAGA
GGCATGTGAAAGCGCCTTGGCGGATGCGTGCGTGGATGGCGAGGACCGGT
TGTTCCTACAAGGGAAATGCCAGGCCTTGGCCGTCCCTCCCCGGAGGTGG
AAGAAGCCGGTGTTTCCCGTGTTGATGTCTGCACCTGTTGTGAGACTTGA
GATGGCCATGGTGCAGAGGAGGAGAGAGAGGGATGGGGAGGGGAAGATCA
GCAGCCTGGAGGATGGGGTGCTGGCATGCTTGCTGGAGGAGGAGGAGGAG
GAGGGGGAAGGAAGGTGGGGAAGCCATGAGGAGGAAGAAGATGGTGTGAC
GGTGAAAGCGAAAGTTGACGAACGAGTGGGAGGAAGAGCGGGGAGGCGGG
GAGGGAGGAAGGAAGGAAATTGTCAATGGCAAGGGGCGCACTGTGAGAAC
AATATCATCTTGACGCTCTTTGGACTTCTCTGCTGGGACGTGCTATGGCT
GGCGACGGCAGAGACGGAACGGCAGCAGCAGCAGCAGTCCTCTCCCGCCA
CCTTTACGAGGAGCAGCAGCAACAGTAGCGAAAGCAGTACTAGCAGCAGC
AAGAGCAGCAGCAGCCCCAGTGAATACCAACATGCTCCCTCCGACCTCAT
GCTCTGTCAGGAGTTTTTACTCTCCCCCGCGCGTCGACGGGCCTTGAACG
AAGTGCTCGCTCGAGTCAAGCGTGGGGAAGCACCAGCAATGCTCGCGGAG
ACGCATGGGCAACATGCGGGCACTCTTTGTTTAGGCGTTGATTGGGTCTC
ATTTCCTTTAGAAACATTACAGACCATCGCCCAAGGCTTCGGGCCACCGG
CACTGATGCTGCTGTGTGAAACTCTGGCGAAGGACTACTCCCTCCTCGCA
CACGGCTTTCCAGATCTGATGCTCTGGAAGGAGGGAGGGAAGGAGGTGCG
TTTGGTGGAGGTGAAAGGGCCGGGGGATAGTTTGAGTTGGGCACAAAAGT
ATTGGATTGATAAATTGGTAGGAGTTGGGGTGAGGGTTGAGGTGGCAAGG
GTTGTGAATGGTGAGGAGGAAAAGGATGGGAAATGGGATGCAAGAGGAGG
AAAACGAGGACGACGAGTAGGGGGAGGACGGAAAGGGAGAGGAGGAGGAG
GACGGGGAGGAGGATGGCGGACAGGAGCAGAGGTCAGGAAAGGGAGGGAG
TAA
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protein sequence of NO06G01230.1

>NO06G01230.1-protein ID=NO06G01230.1-protein|Name=NO06G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1101bp
MKRAALEKKSSVNEDDHDHEVEIIEMLPSQGKKRKSSTLFGYGFGGNSSS
TSSATAADCPPSLPPLSPPPAWGKLIDEEAAAKVILQRFLGYHPPATRRL
FTASYRGTFNDRHNAVPGVGRASSFGRYGSGVRSSLNCTGCLGLTWNSGD
IGNESPEAASQWEQDQDDDDEGGGDEEIADIADAVGSAPKALRNFCVVLD
WALKHSEILKNCPQDVARLEALRQDLTPSAADLFWRCFHRARAVCRVSLQ
QEHQQWQGKRGDRSATAMHSSSKGSNDKHDTCALLQELVGKQAILDVTQN
ETILLTHLYDVFAALRADELIRLNNFLFGSAGASSAASATAANAVASSFS
SLGGKRGSATRDDSLATIDNFISQCQRERDPILLRRKLGKDLIKWLGKDV
GKQQKKQQQQQQAFRLVCVEPALAKLLQRVFALFFMTNGYDAEDAVVLLW
NDLGGLRVVGRKGVGDGGGGGGRGGEGWGMVPTIAASSSSSSQVLIELSD
EEEEEKSGTGNHHHHHQPQQQRHISTATRSPSSFQPLGPSFIPPSYAQLF
DSSLSLADAFEQAVVAGDAVTAYSCLHAVSNLFLPPPPFQEEQAHEQKRD
RTPLLSSLSTLEEDRASSSSGGGCSGDGRGVEVHRLVPPPTYRGLHDLPR
VLFKLLSAVMGRGISLLERERKYGQAVHYLRIVLEGTSNLRWSLRGYFHV
RLVLDLGHSNRPGDALEACESALADACVDGEDRLFLQGKCQALAVPPRRW
KKPVFPVLMSAPVVRLEMAMVQRRRERDGEGKISSLEDGVLACLLEEEEE
EGEGRWGSHEEEEDGVTVKAKVDERVGGRAGRRGGRKEGNCQWQGAHCEN
NIILTLFGLLCWDVLWLATAETERQQQQQSSPATFTRSSSNSSESSTSSS
KSSSSPSEYQHAPSDLMLCQEFLLSPARRRALNEVLARVKRGEAPAMLAE
THGQHAGTLCLGVDWVSFPLETLQTIAQGFGPPALMLLCETLAKDYSLLA
HGFPDLMLWKEGGKEVRLVEVKGPGDSLSWAQKYWIDKLVGVGVRVEVAR
VVNGEEEKDGKWDARGGKRGRRVGGGRKGRGGGGRGGGWRTGAEVRKGRE
*
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Synonyms
Publications