Naga_100121g2, gene4352 (gene) Nannochloropsis gaditana

Overview
NameNaga_100121g2
Unique Namegene4352
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:781706..784968 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100121g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:781706..784968 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL145ngnoL145Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01230NO06G01230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4510rna4510-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4510rna4510Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4510

>rna4510-protein ID=rna4510-protein|Name=rna4510|organism=Nannochloropsis gaditana|type=polypeptide|length=1009bp
MPCDGRSKTEKREQEEDDEVEIIEVLTVRSKRVKSSTLYGYGFGSSTLNS
LHPTKTLPSLPPLPPVPAWGRLIDEQSTAKVALQRFLGFSPPLLRHAYTA
CYRGVFNDRFNAVPGMGIASIFGRYGSGVRSILNVSGCSTFSSRSVEHAE
GLVRDQGRSDGQAILNPEVIQDVEGEEDDDVSSLPNGNAQGAKFWNKSHR
NFNFILNWALECSEVLKSCRQDVQDLQKLRVGLSPEAATLLWQCFHSPRA
ICRVHVQREGKKTIVKGKSSDRNDNGALQELVKQQVVRDVTGDQGALLMH
LYDVFAALRADELARMTLCLFGSAAAATSAVSSSLPCSWRGRRNASREAS
LKSLSTFLERCQKEGSPERVRRKLGHDLVKWLAKETQAPLQVKGEQQQQQ
SFRLVCLAPRLAKLLQRLFALFFMTNGYDAEDAVVLWWNDLETLRFASRG
DVDGAGQGRSGEGLLPFASRGPSTSTKSSADDENQEAEATIQKAERPPRS
ELPVAWPGLGSPEIPCAYRQFADTTLSLSDAFEAAVASGDSATAYACLHT
VSDLFLPRPMLPAHASGSVVSDPACTSLAALEVTQVKTGTHRFQLDVPAE
YRGLEELPGILFKVLARVIGRGIGLLERDRKHAQAVHYLKIILDGSEPLP
WSLRGHFHSRLVLDLVHCNRPGEALAACEHALADPRVDGEDRLFLQAKCL
SLAVAPRRWKKPTFPALQTAPVLELKMAEVQGWRQKGKSLEDSVLACLLQ
REGDGMAGREGCFPGVREEDPQQAGHWRGAHWENGLMLSLFGILCWDVLW
SAQPAHSEKESILATSSQGANGGRPDCRTRSSRGTRSTQSCRYQHAPCDL
QHNRGFLKSCPGRVSALEQVLARIQRGESGALLAENHARYHGTLCLGIDW
TTFSLPVLQTVAEALGSSALMLLCETLIRDYSLLSHGFPDLLLWRDAGPH
GGMPAMVRLVEVKGPGDSLSWAQKYWIDKLLGVGVRVEVARVVEGNERGL
RPGAQRRKA
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Synonyms
Publications