Naga_100147g9, gene9000 (gene) Nannochloropsis gaditana

Overview
NameNaga_100147g9
Unique Namegene9000
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:272086..274522 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100147g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:272086..274522 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00770NO22G00770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9278rna9278-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9279rna9279-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9280rna9280-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9278rna9278Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9279rna9279Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9280rna9280Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9278

>rna9278-protein ID=rna9278-protein|Name=rna9278|organism=Nannochloropsis gaditana|type=polypeptide|length=307bp
MIFSVPQLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHA
VDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEG
EGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQS
VNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEV
SCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFD
VVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPL
GRNMIFG
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protein sequence of rna9279

>rna9279-protein ID=rna9279-protein|Name=rna9279|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLE
STHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSM
TQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVA
RGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLE
HVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKS
FLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQA
GGPLGRNMIFG
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protein sequence of rna9280

>rna9280-protein ID=rna9280-protein|Name=rna9280|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLE
STHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSM
TQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVA
RGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLE
HVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKS
FLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGVKYDAEGEA
QGPVYDSDSSSTIHLSNGMVLYLREVDDYLAFVGLMRAENFQKKGLIDFN
IDCLKRSLGRLSSEGGSGGGGKGHVHEEKRNIMSGASRKGTPDPYQRIRN
GPASMSDLLEIK
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Synonyms
Publications