Naga_100019g47, gene8947 (gene) Nannochloropsis gaditana

Overview
NameNaga_100019g47
Unique Namegene8947
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:139247..140755 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100019g47
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:139247..140755 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL078ngnoL078Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL076ngnoL076Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01300NO22G01300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9225rna9225-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9224rna9224-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9225rna9225Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9224rna9224Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9225

>rna9225-protein ID=rna9225-protein|Name=rna9225|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp
MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDA
MAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEV
CFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVT
PVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITG
GCRGIFLSAQPHHVPITWPTHMSRFALV
back to top

protein sequence of rna9224

>rna9224-protein ID=rna9224-protein|Name=rna9224|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp
MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDA
MAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEV
CFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVT
PVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITG
GCRGIFLSAQPHHVPITWPTHMSRFALV
back to top
Synonyms
Publications