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Properties
| Property Name | Value |
|---|
| Product | nudix hydrolase |
| Orig transcript id | gnl|cribi|Naga_100019g47.462.mrna |
| Orig protein id | gnl|cribi|Naga_100019g47.462 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:139247..140750 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9225 ID=rna9225|Name=rna9225|organism=Nannochloropsis gaditana|type=mRNA|length=1335bp
TCAGCCCAAAAGCGAACTCAACAATTGTCTCGCTCCCTGCAGTGTGAATT
GGAAAATATGAGTAAATCAGAAACATTTGCTACAACTCCGGGTGCAAGGA
AGGCCTACGGCTTTATCCATGGACGTGGCCTTGGTATCCTTGTGTCCCTC
CTTCGGGTCGCTGCACCCCGTGACTCACGCACTTAAGACCCTGCGTTCAA
GCCACCGAACTCAATTAACCTGTGCGACCCCGCTTAACAGCTCACAGGCC
AAACGGGATGGATGCACTGATCGAGGCCTTTGTTTGTGCCTCCCAGAAGG
TTGGCCATGCACAATCACAACAAAATGTCCAATGTTGTCCACAAGCGTCA
GCTTCCAGTCTTACAACTCCATCGAGTTTTGGTGGGAGCTTCGTGAGAAA
TGATGCCATGGCGTATAACAGGAGTCGTGCTACCAGTCCCGTTACGCTTT
GCAAAGCTGCTGTTCTTATACCTCTTTTCGAAAACCGAGAAGATGGCAAG
ATACATTGCTTGCTGACCGTTCGACCGTCGCACATGCGAGCTCATGCAGG
AGAGGTGTGTTTCCCTGGCGGGAAACTAGACGATGGGGAGGATGTCGTGT
CTGCAGCGCTGAGGGAAGCATGGGAGGAGGTCGGACTTGCACCCAAGGTA
GTGCGTGTGCTAGGAACAATGACCCCGACCCTCTCACTTCATCTCTACGA
AGTTACACCCGTGGTAGCTGTTATACCTCCTGACTTCGTCGCACAGCCCA
ACCCTGAGGTGATGAAAGAGCGAGAGAAATGGACTCGGATGACTACCATA
GTGACAAATTACTTGTTCCCCTTTGTATTATTACACCTCTTGGTGTCAAT
CACAGGAGGTTGCCGAGGTATTTTCTTGTCCGCTCAGCCTCATCATGTCC
CCATCACCTGGCCAACACACATGTCAAGATTTGCACTGGTTTAGCGCCTG
GCGGATGCACAAATTTCGGCATGCAGATAAATGGGATGTGTGGGGTTTGA
CAGCTGAGACCCTGCTTCGACTTGTCATCTTTTGCTTTCCTGAGCACCCT
TTCCCATATGAAACATGTCATCCCGACGGAACACACATGGAAACATGGTA
TCGAAGGGTGCTGGCACTCCCAGAATTTCATGAGCAAGCACAGGCAGCTG
AAAGTAAACGCGCAAGAAAAGCAGGCAGCCGCGCTAATAGACAAAGCCGC
AGGTCGCTCACAGGTGAAAAGAAGTCTTAGCTGTGGAGTTGGGGAATGTT
CTGTCTTCGAAGAAATTTTATATACATCGTCAGGAAAATGTACAAAGTAA
GGGGAAAAAGAAAATAATAGAGCATGCCCCGCAAA back to topprotein sequence of rna9225 >rna9225-protein ID=rna9225-protein|Name=rna9225|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp
MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDA
MAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEV
CFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVT
PVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITG
GCRGIFLSAQPHHVPITWPTHMSRFALV back to topmRNA from alignment at KK037252.1:139247..140750- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9225 ID=rna9225|Name=rna9225|organism=Nannochloropsis gaditana|type=mRNA|length=1504bp|location=Sequence derived from alignment at KK037252.1:139247..140750- (Nannochloropsis gaditana)
CCAAAAGCGAACTCAACAATTGTCTCGCTCCCTGCAGTGTGAATTGGAAA
ATATGAGTAAATCAGAAACATTTGCTACAACTCCGGGTGCAAGGAAGGCC
TACGGCTTTATCCATGGACGTGGCCTTGGTATCCTTGTGTCCCTCCTTCG
GGTCGCTGCACCCCGTGACTCACGCACTTAAGACCCTGCGTTCAAGCCAC
CGAACTCAATTAACCTGTGCGACCCCGCTTAACAGGTATACAGTCCTTCT
TTGCTTGAGTGTATTTCATTTTGATAATCCCATGGAAATAGTGATGGCAA
TCTGTGCTCTGGACGGGTGAGGTTTGGGTTGATACAGCCTCCCATATGCT
TGCTAGCCCTTTCACTACGGTCATGTTTCCTCGCTCTCTCCCTACACGAT
ACGAAGTAGCTCACAGGCCAAACGGGATGGATGCACTGATCGAGGCCTTT
GTTTGTGCCTCCCAGAAGGTTGGCCATGCACAATCACAACAAAATGTCCA
ATGTTGTCCACAAGCGTCAGCTTCCAGTCTTACAACTCCATCGAGTTTTG
GTGGGAGCTTCGTGAGAAATGATGCCATGGCGTATAACAGGAGTCGTGCT
ACCAGTCCCGTTACGCTTTGCAAAGCTGCTGTTCTTATACCTCTTTTCGA
AAACCGAGAAGATGGCAAGATACATTGCTTGCTGACCGTTCGACCGTCGC
ACATGCGAGCTCATGCAGGAGAGGTGTGTTTCCCTGGCGGGAAACTAGAC
GATGGGGAGGATGTCGTGTCTGCAGCGCTGAGGGAAGCATGGGAGGAGGT
CGGACTTGCACCCAAGGTAGTGCGTGTGCTAGGAACAATGACCCCGACCC
TCTCACTTCATCTCTACGAAGTTACACCCGTGGTAGCTGTTATACCTCCT
GACTTCGTCGCACAGCCCAACCCTGAGGTGATGAAAGAGCGAGAGAAATG
GACTCGGATGACTACCATAGTGACAAATTACTTGTTCCCCTTTGTATTAT
TACACCTCTTGGTGTCAATCACAGGAGGTTGCCGAGGTATTTTCTTGTCC
GCTCAGCCTCATCATGTCCCCATCACCTGGCCAACACACATGTCAAGATT
TGCACTGGTTTAGCGCCTGGCGGATGCACAAATTTCGGCATGCAGATAAA
TGGGATGTGTGGGGTTTGACAGCTGAGACCCTGCTTCGACTTGTCATCTT
TTGCTTTCCTGAGCACCCTTTCCCATATGAAACATGTCATCCCGACGGAA
CACACATGGAAACATGGTATCGAAGGGTGCTGGCACTCCCAGAATTTCAT
GAGCAAGCACAGGCAGCTGAAAGTAAACGCGCAAGAAAAGCAGGCAGCCG
CGCTAATAGACAAAGCCGCAGGTCGCTCACAGGTGAAAAGAAGTCTTAGC
TGTGGAGTTGGGGAATGTTCTGTCTTCGAAGAAATTTTATATACATCGTC
AGGAAAATGTACAAAGTAAGGGGAAAAAGAAAATAATAGAGCATGCCCCG
CAAA back to topCoding sequence (CDS) from alignment at KK037252.1:139247..140750- >rna9225 ID=rna9225|Name=rna9225|organism=Nannochloropsis gaditana|type=CDS|length=687bp|location=Sequence derived from alignment at KK037252.1:139247..140750- (Nannochloropsis gaditana)
ATGGATGCACTGATCGAGGCCTTTGTTTGTGCCTCCCAGAAGGTTGGCCA
TGCACAATCACAACAAAATGTCCAATGTTGTCCACAAGCGTCAGCTTCCA
GTCTTACAACTCCATCGAGTTTTGGTGGGAGCTTCGTGAGAAATGATGCC
ATGGCGTATAACAGGAGTCGTGCTACCAGTCCCGTTACGCTTTGCAAAGC
TGCTGTTCTTATACCTCTTTTCGAAAACCGAGAAGATGGCAAGATACATT
GCTTGCTGACCGTTCGACCGTCGCACATGCGAGCTCATGCAGGAGAGGTG
TGTTTCCCTGGCGGGAAACTAGACGATGGGGAGGATGTCGTGTCTGCAGC
GCTGAGGGAAGCATGGGAGGAGGTCGGACTTGCACCCAAGGTAGTGCGTG
TGCTAGGAACAATGACCCCGACCCTCTCACTTCATCTCTACGAAGTTACA
CCCGTGGTAGCTGTTATACCTCCTGACTTCGTCGCACAGCCCAACCCTGA
GGTGATGAAAGAGCGAGAGAAATGGACTCGGATGACTACCATAGTGACAA
ATTACTTGTTCCCCTTTGTATTATTACACCTCTTGGTGTCAATCACAGGA
GGTTGCCGAGGTATTTTCTTGTCCGCTCAGCCTCATCATGTCCCCATCAC
CTGGCCAACACACATGTCAAGATTTGCACTGGTTTAG back to top
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