Naga_100017g48, gene821 (gene) Nannochloropsis gaditana

Overview
NameNaga_100017g48
Unique Namegene821
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:585420..587223 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100017g48
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:585420..587223 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03790NO03G03790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna858rna858-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna857rna857-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna858rna858Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna857rna857Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna858

>rna858-protein ID=rna858-protein|Name=rna858|organism=Nannochloropsis gaditana|type=polypeptide|length=417bp
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGL
RVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLP
FLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFS
FEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAE
MARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTS
AGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERK
KWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRN
IGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGE
ILSRLDVTRKWPELIDL
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protein sequence of rna857

>rna857-protein ID=rna857-protein|Name=rna857|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGL
RVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLP
FLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFS
FEFGRAIPKDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARR
RERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLA
SLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAF
ENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGK
HILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSR
LDVTRKWPELIDL
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Synonyms
Publications