NO03G03790, NO03G03790 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03790 vs. NCBI_GenBank
Match: EWM29842.1 (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 440.7 bits (1132), Expect = 5.300e-120 Identity = 269/411 (65.45%), Postives = 305/411 (74.21%), Query Frame = 0
Query: 17 PRHHRRLGPASLLAFLVCCSTTIAPTLGFLVNPRTTFPRIHALPSRGHRGESSISRGRRMRPMTLVTAGERSPSSTFPAVLGGLSLPFLACTSQAVVAAPGAGRIVGKATDISPPTPPSNSRIERSITPWS------SFEFSRSIPKIRIQDGDLISNDRVVVHGRPIQKKDVAIIGGFVGAAIAQSELAKRREREGGAGGLDGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPELIDL 422
P RR A + V + TL + R P++ + R G + P V P + PAVLGGLSLPFL+ ++QA +AAPGAGRI G+ATDI ERS+TP S SFEF R+IPKIRIQDGDL+SNDRV+VHGRPI+K DVA+ GGF+G AIAQ+E+A+RRER G GG++GDV+LVTYQ+ALYDRDQ GLMQALQRLA+RAETTTS+GLASLASSVSLELLRSYEGWVAA A SGRFKDMAAAERAFNEAS++ERKKW FEN+ EDRAA XXXXXXXXXXXXXXXX GKQL+VLTLMVACR+IGGK ILPR+ GSAEALE SLERFAAALLEKNGKNVLAVDVSWTPDG+GE LSR DV KWPELIDL
Sbjct: 18 PCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVI----HPKANLPAVLGGLSLPFLSQSAQA-LAAPGAGRIAGRATDIPXXXXXXXXXXERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERL-GQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAA-----MVLAXXXXXXXXXXXXXXXXMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
BLAST of NO03G03790 vs. NCBI_GenBank
Match: EWM29841.1 (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 427.9 bits (1099), Expect = 3.500e-116 Identity = 265/411 (64.48%), Postives = 301/411 (73.24%), Query Frame = 0
Query: 17 PRHHRRLGPASLLAFLVCCSTTIAPTLGFLVNPRTTFPRIHALPSRGHRGESSISRGRRMRPMTLVTAGERSPSSTFPAVLGGLSLPFLACTSQAVVAAPGAGRIVGKATDISPPTPPSNSRIERSITPWS------SFEFSRSIPKIRIQDGDLISNDRVVVHGRPIQKKDVAIIGGFVGAAIAQSELAKRREREGGAGGLDGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPELIDL 422
P RR A + V + TL + R P++ + R G + P V P + PAVLGGLSLPFL+ ++QA +AAPGAGRI G+ATDI ERS+TP S SFEF R+IPK DGDL+SNDRV+VHGRPI+K DVA+ GGF+G AIAQ+E+A+RRER G GG++GDV+LVTYQ+ALYDRDQ GLMQALQRLA+RAETTTS+GLASLASSVSLELLRSYEGWVAA A SGRFKDMAAAERAFNEAS++ERKKW FEN+ EDRAA XXXXXXXXXXXXXXXX GKQL+VLTLMVACR+IGGK ILPR+ GSAEALE SLERFAAALLEKNGKNVLAVDVSWTPDG+GE LSR DV KWPELIDL
Sbjct: 18 PCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVI----HPKANLPAVLGGLSLPFLSQSAQA-LAAPGAGRIAGRATDIPXXXXXXXXXXERSVTPSSSSDSRFSFEFGRAIPK----DGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERL-GQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAA-----MVLAXXXXXXXXXXXXXXXXMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
BLAST of NO03G03790 vs. NCBI_GenBank
Match: XP_005856177.1 (membrane protein [Nannochloropsis gaditana CCMP526] >EKU20181.1 membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 347.8 bits (891), Expect = 4.700e-92 Identity = 201/250 (80.40%), Postives = 221/250 (88.40%), Query Frame = 0
Query: 172 VVHGRPIQKKDVAIIGGFVGAAIAQSELAKRREREGGAGGLDGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPELIDL 422
+VHGRPI+K DVA+ GGF+G AIAQ+E+A+RRER G GG++GDV+LVTYQ+ALYDRDQ GLMQALQRLA+RAETTTS+GLASLASSVSLELLRSYEGWVAA A SGRFKDMAAAERAFNEAS++ERKKW FEN+ EDRAA XXXXXXXXXXXXXXXX GKQL+VLTLMVACR+IGGK ILPR+ GSAEALE SLERFAAALLEKNGKNVLAVDVSWTPDG+GE LSR DV KWPELIDL
Sbjct: 1 MVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERL-GQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAA-----MVLAXXXXXXXXXXXXXXXXMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 244
BLAST of NO03G03790 vs. NCBI_GenBank
Match: CBN74099.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.1 bits (196), Expect = 1.800e-11 Identity = 72/262 (27.48%), Postives = 117/262 (44.66%), Query Frame = 0
Query: 175 GRPIQKKDVAIIGGFVGAAIAQSELAKRREREGGA--GGLDG----------DVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRF--KDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKI-LPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPELIDL 422
G + D+ ++G G A S+L K GG G LD DV + + DR + ++ L+ ++ R +T + SGLA + S VSL L R WVA+ ++ F +++ AE F++ S++ R K E + G + V++L+VA R K++ L R + L+ +L+ A+ L G NVLA +V WTP+ E L+R+D + +PEL+DL
Sbjct: 168 GFGVNPVDLLVLG---GVAYGVSQLVK----GGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKIERETNA------------VIGGKNISAERSGGGGIGSGGPTVAVVSLVVALRGDAMKRLGLDRSVSNISGLKTALQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 410
BLAST of NO03G03790 vs. NCBI_GenBank
Match: KEF42941.1 (hypothetical protein ER33_03485 [Cyanobium sp. CACIAM 14]) HSP 1 Score: 77.0 bits (188), Expect = 1.500e-10 Identity = 64/206 (31.07%), Postives = 95/206 (46.12%), Query Frame = 0
Query: 213 DGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPEL 419
DG V + QV L L L+RLA A+T+TSSGL + SL LLR + WV A + G+ +AE FN S++ER K E + A IV+TL+VA R+ ++ + G+AE L SL++ A ++LA++V W P+G GE LS + ++T +P+L
Sbjct: 129 DGPVSIAQIQVGLL-ASARDLQDDLRRLAASADTSTSSGLQRVLQETSLSLLRHPDLWVYANGEVGQV-PFTSAESTFNRLSMQERSK--LERELTANVA----------GRRFSAPAAVAPGASDAASDFIVVTLLVASRN----RLAIKGAGTAEDLRESLQKLGAV----GADDLLALEVIWQPEGAGEVLSTEQLITAYPDL 312
BLAST of NO03G03790 vs. NCBI_GenBank
Match: WP_106220682.1 (DUF1517 domain-containing protein [Aphanothece minutissima] >PSB37969.1 hypothetical protein C7B81_07685 [Aphanothece cf. minutissima CCALA 015]) HSP 1 Score: 76.3 bits (186), Expect = 2.600e-10 Identity = 63/206 (30.58%), Postives = 97/206 (47.09%), Query Frame = 0
Query: 213 DGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPEL 419
DG V + QV L L L+RLA ++T++SSGL + SL LLR + WV A+ + G+ A+AE FN S++ER K E + A IV+TL+VA R + + + GSA+ L +SL++ A ++LA++V W P+G GE L+ + V+T +P+L
Sbjct: 128 DGPVSIAQIQVGLL-ASARDLQDDLRRLAGSSDTSSSSGLQRVLQETSLSLLRHPDLWVYASGEVGQV-PFASAESTFNRLSMQERSK--LERELTANVA----------GRRFSEPAPVAPGASDAASDFIVVTLLVASR----RSLAIKGAGSADDLRDSLQKLGAV----GADDLLAIEVIWQPEGAGEVLTTEQVITAYPDL 311
BLAST of NO03G03790 vs. NCBI_GenBank
Match: WP_006454954.1 (DUF1517 domain-containing protein [Synechococcus sp. PCC 7335] >EDX85211.1 conserved hypothetical protein [Synechococcus sp. PCC 7335]) HSP 1 Score: 75.9 bits (185), Expect = 3.400e-10 Identity = 68/242 (28.10%), Postives = 110/242 (45.45%), Query Frame = 0
Query: 186 IGGFVG--AAIAQSELAKRREREGGAGGLDGDVF-------LVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPEL 419
+GG G IA + R RE G GG + + + QV L + L L RLA+ A+T+TS+GL + +L LLR E WV A S + + + +AE+AFN+ ++ ER K+ E+ A + IV T++VA + GK LP+ S + + ++ R + + + ++AV+V WTP GETLS +++ ++P L
Sbjct: 106 MGGLFGIFITIAIANFIIRSFREAGVGGDSAETYSSNPTVSVARLQVGLL-AEARSLQTDLTRLAETADTSTSAGLTKILQETTLSLLRHPEYWVYADIDSDQTR-LLSAEQAFNQLAIAERSKFTRESLSNVNAQISQAKSKAALNSSGELATAEDPG------EYIVATILVASQ---GKLNLPKNTTSTDDVRQAINRIGSI----SSEQLMAVEVLWTPQVPGETLSADELIAEYPNL 332
BLAST of NO03G03790 vs. NCBI_GenBank
Match: AFA52597.1 (hypothetical protein [Vaucheria litorea]) HSP 1 Score: 74.7 bits (182), Expect = 7.600e-10 Identity = 71/256 (27.73%), Postives = 122/256 (47.66%), Query Frame = 0
Query: 182 DVAIIGGFVGAAIAQSELAKRREREGGAGGLDGDVF--------LVTYQVAL--YDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRF--KDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILP----RKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPELIDL 422
DVAI+ G V AI+Q + + G D D F ++ Q+ L DR ++G++ ++ +AQ T+ ++GL+ + S L LLR+ + W++A+++ F ++ AE AFN SV ER K FE + + V++L++A I G+ + P + S AL+N+L + ++ L +G NVLA ++ WTP+ E L R+ ++ +PEL+DL
Sbjct: 107 DVAIV-GVVIFAISQVLNSGSSLTQNRWGNFDDDYFSSLGNGVSVLKLQICLDCKDRTENGVLGQIRNIAQ---TSQNTGLSYMTSEACLALLRNSDNWISASSKFEYFDPRNSNKAESAFNAYSVAERSK--FEKETTENFSQNEIGVPTK----------------------AVVSLVLA---INGETLRPFDLDKSVNSVSALKNALSKISSDSLTDDGMNVLAAELIWTPEDAREVLDRESIIQDFPELMDL 331
BLAST of NO03G03790 vs. NCBI_GenBank
Match: WP_072622591.1 (DUF1517 domain-containing protein [Spirulina major]) HSP 1 Score: 74.7 bits (182), Expect = 7.600e-10 Identity = 65/219 (29.68%), Postives = 100/219 (45.66%), Query Frame = 0
Query: 205 REGGAGGLDGD-----VFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPEL 419
R G GG +GD V + QV L Q GL L++LAQ A+T T++G A++ + SL +LR E WV A+S ++ + AAE FN+ ++ ER K+ E +A + +V T++V GK LP+ +SL+ L G +LAV++ WTP +G+TLS D++ +P L
Sbjct: 115 RNSGFGGAEGDRTPSKVSVAKVQVGLLGSAQ-GLKTELEQLAQNADTGTANGRANVLQATSLAILRHPELWVYGAAES-QYTALEAAESTFNQLALTERSKFTAETLSNVDSALQQLELQVKTPQEALVEQGEVG-------EYLVATIIVGA---VGKLDLPKVTDG-----DSLKTVVQQLGSVGGDRLLAVEILWTPQADGDTLSTDDILANYPNL 316
BLAST of NO03G03790 vs. NCBI_GenBank
Match: WP_094585459.1 (DUF1517 domain-containing protein [Synechococcus sp. BO 8801]) HSP 1 Score: 74.7 bits (182), Expect = 7.600e-10 Identity = 71/237 (29.96%), Postives = 107/237 (45.15%), Query Frame = 0
Query: 184 AIIGGFVGAAIA--QSELAKRREREGGAGGLDGDVFLVTYQVALYDRDQHGLMQALQRLAQRAETTTSSGLASLASSVSLELLRSYEGWVAATAQSGRFKDMAAAERAFNEASVKERKKWGFENSVEDRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLIVLTLMVACRHIGGKKILPRKQGSAEALENSLERFAAALLEKNGKNVLAVDVSWTPDGEGETLSRKDVMTKWPEL 419
A+ GG A+A SEL+ R DG V + QV L L L+RLA ++T++SSGL + SL LLR + WV A + G+ A+AE FN S++ER K E + A IV+TL+VA R + + + G+A+ L +SL++ A ++LA++V W P+G GE L+ + V+T +P L
Sbjct: 106 ALRGGXXXPALAGSGSELSYRPRP-------DGPVSIAQVQVGLL-ASARDLQDDLRRLAGSSDTSSSSGLQRVLQETSLSLLRHPDLWVYANGEVGQV-PFASAESTFNRLSMQERSK--LERELTANVA----------GRRFSEPAPVAPGASDAASDFIVVTLLVASR----RNLAIKGAGTADDLRDSLQKLGAV----GADDLLAIEVIWQPEGAGEVLTTEQVITAYPNL 313 The following BLAST results are available for this feature:
BLAST of NO03G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03790 ID=NO03G03790|Name=NO03G03790|organism=Nannochloropsis oceanica|type=gene|length=2119bpback to top protein sequence of NO03G03790.1 >NO03G03790.1-protein ID=NO03G03790.1-protein|Name=NO03G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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