Naga_100396g1, gene7496 (gene) Nannochloropsis gaditana

Overview
NameNaga_100396g1
Unique Namegene7496
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:224914..227492 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100396g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:224914..227492 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL047ngnoL047Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00850NO23G00850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7741rna7741-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7742rna7742-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7741rna7741Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7742rna7742Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7741

>rna7741-protein ID=rna7741-protein|Name=rna7741|organism=Nannochloropsis gaditana|type=polypeptide|length=457bp
MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSAD
LQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAI
QCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLG
KQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRP
ENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDD
ILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDL
RQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSS
TSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRE
LLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAV
RRGLFVS
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protein sequence of rna7742

>rna7742-protein ID=rna7742-protein|Name=rna7742|organism=Nannochloropsis gaditana|type=polypeptide|length=557bp
MCDSTSTTKASSASSIIVSMNDEDDYLSDNSSCDSRMEKEMDAANMLSSL
RMLTPRKLNEESLRPAPSGAGDRQSKWPAAHRPPASSTATLCPAATLKRE
MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSAD
LQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAI
QCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLG
KQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRP
ENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDD
ILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDL
RQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSS
TSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRE
LLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAV
RRGLFVS
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Synonyms
Publications