NO23G00850, NO23G00850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EWM22951.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 524.2 bits (1349), Expect = 5.300e-145 Identity = 350/634 (55.21%), Postives = 402/634 (63.41%), Query Frame = 0 Query: 1 MCDS-STTXXXXXXXXXXXXXXDEDYLSDSDCSYDSRREKEMDAANMLSSLRNLALPKPKKEVSDCMPIPARLPSTAGAKR-KLLALIRTPASSTATLLPAATFMREMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTISAASNTAVATLVGSDNGTSNLSFPPSTAASAFGYPRKSGSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARRAQERSFVATPQWDLKAEKAAIFNYCLYFQPHDC-IDSFLPSVTSILRTQDPEAYSATLADINRQKLNRRLTAGLKREASKYPPTSPLCLALQREKLIQQKPAPKKVLQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPHSAVPPYIPSTSFHVSPP--------------------ASEHMTKVMSLLQDALRVETHPAQRDLLRQAFRATVQSNRAAVNYVEGILGGGFARLDLEKQEDRESLVEALTSAVRRGLFVN 612 MCDS STT ++DYLSD+ S DSR EKEMDAANMLSSLR L P+K + + PA PS AG ++ K A R PASSTATL PAAT REMS XXXXXXXXXXXXXXXXXXXXXXX STI + + GSD T + S +AF K G KWT KED+QLR+GV VGEC+WD I+ QFL +RSAIQCSHRWQKVLRPGL+KGPWTQEED+II+ CRQNGV EWKEIALRL GRLGKQCRDRWLNHLDPAIS+ YWTEEED+VLAEGR +YGNAWAKIA+LLPGRPENSIKNRWYSARRAQERSFVA P+WDLK EK I ++C F+ + +D L + ++LR +DP AYS +LA INRQKL+RRLTAGLKREA+KY P S L AL+R KL+QQK + L AR + ++ P IPS+S S P A HM++VM LLQDALR ET +R+LL+QA ATVQSNRAAVNYVEGILGGGFA+LDL+ DR SLVEALTSAVRRGLFV+ Sbjct: 1 MCDSTSTTKASSASSIIVSMNDEDDYLSDNS-SCDSRMEKEMDAANMLSSLRMLT---PRKLNEESLR-PA--PSGAGDRQSKWPAAHRPPASSTATLCPAATLKREMS---------XXXXXXXXXXXXXXXXXXXXXXXKAGLCSTIESMGPGS-----GSDMETKSADL-QSIHPTAF----KPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAAR---------------------------------------------------RLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLXXXXCXXXXXXXXXXGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 557
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EWM22952.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 483.8 bits (1244), Expect = 7.900e-133 Identity = 259/449 (57.68%), Postives = 299/449 (66.59%), Query Frame = 0 Query: 184 KSGSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARRAQERSFVATPQWDLKAEKAAIFNYCLYFQPHDC-IDSFLPSVTSILRTQDPEAYSATLADINRQKLNRRLTAGLKREASKYPPTSPLCLALQREKLIQQKPAPKKVLQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPHSAVPPYIPSTSFHVSPP--------------------ASEHMTKVMSLLQDALRVETHPAQRDLLRQAFRATVQSNRAAVNYVEGILGGGFARLDLEKQEDRESLVEALTSAVRRGLFVN 612 K G KWT KED+QLR+GV VGEC+WD I+ QFL +RSAIQCSHRWQKVLRPGL+KGPWTQEED+II+ CRQNGV EWKEIALRL GRLGKQCRDRWLNHLDPAIS+ YWTEEED+VLAEGR +YGNAWAKIA+LLPGRPENSIKNRWYSARRAQERSFVA P+WDLK EK I ++C F+ + +D L + ++LR +DP AYS +LA INRQKL+RRLTAGLKREA+KY P S L AL+R KL+QQK + L AR + ++ P IPS+S S P A HM++VM LLQDALR ET +R+LL+QA ATVQSNRAAVNYVEGILGGGFA+LDL+ DR SLVEALTSAVRRGLFV+ Sbjct: 60 KPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAAR---------------------------------------------------RLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLXXXXCXXXXXXXXXXGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 457
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EWM20993.1 (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 220.7 bits (561), Expect = 1.200e-53 Identity = 116/276 (42.03%), Postives = 157/276 (56.88%), Query Frame = 0 Query: 186 GSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARRAQERSFV---ATPQWDLKAEKAAIFNYCLYF-------QPHD----------------------CIDSFLPSVTSILRTQDPEAYSATLADINRQKLNRRLTAGLKREASKYPPTSPLCLALQR 430 G WT ++D +LR+ V G +W I+ + +G + QC +RW KVLRPGL+KGPW +EED +IL C ++G+ +W EIA R+PGRLGKQCR+RWLNHLDP++S+ W+ EED+ L G+ +GNAWAKIA LLPGR ENS+KNRW SA A+ R V P WD E+ + YCL +P + + F+PSV L +P Y L + + L+ RL L+REA KY PT L ++ R Sbjct: 130 GPSWTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAAMARLRGSVDRSPPPDWDEDLERQTVREYCLRMAEAVGASEPQEGMARAAGAWPPASDSSIRKMSSKLADFIPSVMGALEGANPGLYGG-LGSAHIKPLHARLRVMLEREAEKYGPTHALYRSVLR 404
BLAST of NO23G00850 vs. NCBI_GenBank
Match: GBG26897.1 (Transcription factor MYB3R-4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 213.8 bits (543), Expect = 1.500e-51 Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 0 Query: 182 PRK-SGSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARR 338 PR+ G +WT +ED +LR GV +G W I+ ++L GRRS +QC HRWQKVLRPGL+KGPWT+EED +I AC + + +W EIA R+PGR+GKQCR+RW NHLDP I WTEEE++VL + +GN W +IA+LLPGRPEN++KNRW SA R Sbjct: 167 PRQGGGGRWTREEDAKLREGVTAIGATKWKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIR 323
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EWM26309.1 (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 211.8 bits (538), Expect = 5.800e-51 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 0 Query: 186 GSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARRAQERSF--VATPQWDL 352 G +W+ +ED LR V G W I+ +FLEG+RS +QC HRWQKVL+PGL+KGPWT EED+IIL C Q G ++W IA +PGRLGKQCR+RW N+LDPA+ + WTEEEDRVLAE + +GNAW KIAR LPGR EN++KNRW S+ R +E++ AT + DL Sbjct: 163 GKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAATKKRDL 330
BLAST of NO23G00850 vs. NCBI_GenBank
Match: GBG33445.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 204.5 bits (519), Expect = 9.200e-49 Identity = 88/159 (55.35%), Postives = 116/159 (72.96%), Query Frame = 0 Query: 180 GYPRKSGSKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARL-LPGRPENSIKNRWYSARR 338 G +K +WT ED+ L+ V +VG +W IA+++L R+ +QC HRWQKVLRPGL+KGPW EEDE I AC ++G+ W EIA R+PGR+GKQCR+RW NHLDP I WTEEED++L EG+ GN W++IA++ LPGRPEN++KNRW +A R Sbjct: 127 GSGKKGSGRWTKAEDESLKLAVKLVGARNWKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNAATR 285
BLAST of NO23G00850 vs. NCBI_GenBank
Match: GBG27799.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 197.2 bits (500), Expect = 1.500e-46 Identity = 81/141 (57.45%), Postives = 109/141 (77.30%), Query Frame = 0 Query: 197 LRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIILACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARR 338 L++ V +G +W I+ +FL G+RS +QC HRWQKVL+PGLIKGPWT+EED+ I+ ++GV +W EIA +PGR+GKQCR+RW NHLDP+I + WTEEEDR+L E ++ GN W +IA++LPGR EN++KNRW SA R Sbjct: 2 LKKAVDTIGARNWKRISQEFLNGKRSDVQCLHRWQKVLKPGLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGGWTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNSAMR 142
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EAY98312.1 (hypothetical protein OsI_20220 [Oryza sativa Indica Group]) HSP 1 Score: 188.3 bits (477), Expect = 6.800e-44 Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 0 Query: 172 PSTAASAFGYPRKSG------SKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIIL-ACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARR 338 P+ A S FG RKSG WT +ED++LR+ V + +W IA F + R+ +QC HRWQKVL P LIKGPWTQEED++I+ +++G +W IA L GR+GKQCR+RW NHLDP I + WT EE+RVLA MYGN WA+IA+LLPGR +NSIKN W S+ R Sbjct: 36 PTAADSIFGRRRKSGPVRRAKGGWTPEEDEKLRKAVDIYNGKNWKKIAESFSD--RTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLR 206
BLAST of NO23G00850 vs. NCBI_GenBank
Match: EEE63978.1 (hypothetical protein OsJ_18804 [Oryza sativa Japonica Group]) HSP 1 Score: 188.3 bits (477), Expect = 6.800e-44 Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 0 Query: 172 PSTAASAFGYPRKSG------SKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIIL-ACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARR 338 P+ A S FG RKSG WT +ED++LR+ V + +W IA F + R+ +QC HRWQKVL P LIKGPWTQEED++I+ +++G +W IA L GR+GKQCR+RW NHLDP I + WT EE+RVLA MYGN WA+IA+LLPGR +NSIKN W S+ R Sbjct: 35 PTAADSIFGRRRKSGPVRRAKGGWTPEEDEKLRKAVDIYNGKNWKKIAESFSD--RTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLR 205
BLAST of NO23G00850 vs. NCBI_GenBank
Match: XP_015637435.1 (PREDICTED: uncharacterized protein LOC4339005 [Oryza sativa Japonica Group]) HSP 1 Score: 188.3 bits (477), Expect = 6.800e-44 Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 0 Query: 172 PSTAASAFGYPRKSG------SKWTGKEDDQLRRGVGVVGECHWDLIAAQFLEGRRSAIQCSHRWQKVLRPGLIKGPWTQEEDEIIL-ACRQNGVVEWKEIALRLPGRLGKQCRDRWLNHLDPAISRRYWTEEEDRVLAEGRDMYGNAWAKIARLLPGRPENSIKNRWYSARR 338 P+ A S FG RKSG WT +ED++LR+ V + +W IA F + R+ +QC HRWQKVL P LIKGPWTQEED++I+ +++G +W IA L GR+GKQCR+RW NHLDP I + WT EE+RVLA MYGN WA+IA+LLPGR +NSIKN W S+ R Sbjct: 38 PTAADSIFGRRRKSGPVRRAKGGWTPEEDEKLRKAVDIYNGKNWKKIAESFSD--RTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLR 208 The following BLAST results are available for this feature:
BLAST of NO23G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00850 ID=NO23G00850|Name=NO23G00850|organism=Nannochloropsis oceanica|type=gene|length=2305bpback to top protein sequence of NO23G00850.1 >NO23G00850.1-protein ID=NO23G00850.1-protein|Name=NO23G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=612bpback to top Synonyms
Publications
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