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Properties
| Property Name | Value |
| Product | myb-like protein |
| Orig transcript id | gnl|cribi|Naga_100396g1.7449.mrna |
| Orig protein id | gnl|cribi|Naga_100396g1.7449 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002473.1 | supercontig | CM002473.1:225016..227492 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7742 ID=rna7742|Name=rna7742|organism=Nannochloropsis gaditana|type=mRNA|length=2443bp AGTGCTAGATGCGTCCACATATCCATTTTGTAAACTACAACTTCTTATGA ACTCATGTACAAATCTGCAACCACTGCGTTTGTGGCAAATCTGTTTTGAT CATAAGGTGCGGCCTTCCATGTGCGACTCCACTTCTACTACCAAAGCTTC GTCAGCGTCCTCCATTATAGTCTCAATGAACGATGAAGACGACTACCTTT CAGACAACAGCAGCTGCGACAGTCGCATGGAAAAAGAAATGGATGCAGCC AACATGCTATCCTCCCTTAGAATGGTAAGTACTTAGATGAAATGTAACTT TTTCTTTGTCCATCGACGGCGAGCCTCATCGCAATTCCGTTGTACATTCC TCACCAAGAGAAGGACCTCCATCTATAGTTTAAAGTGAATATCAATTGTT TGTTTCTTCGCTCAGCGACTTTACTAGCATCTCTGTCCCAAGATGTATCC TGTGTTCGCACGCTGTTGCTGAAGCTCACAAAGTCCAACGAGCAGAGCCC CTTTTACTCATAAGTTATCTTCCTGCGCCGATTCTGGAGCCCGTTCCTCA TCATTAAATACCTATACTCTTTCCTTCAATACTTAATCAGCTCACTCCGC GCAAGCTGAATGAAGAGTCGCTCCGCCCTGCTCCCTCTGGGGCTGGTGAT AGGCAGAGCAAATGGCCCGCGGCGCACAGGCCTCCCGCATCTTCGACTGC GACCCTCTGCCCGGCGGCGACGCTCAAGCGAGAAATGAGTATGGCAAGTA CAACTAGTGCCAGTAGTCTAAATAGCAGCAGCAGCAATAACAGTGACAGC AACAACGTGAAGGCTGGGCTCTGCAGCACCATTGAGAGCATGGGCCCGGG GTCGGGGAGCGACATGGAGACTAAATCAGCGGATCTTCAGTCCATTCACC CCACTGCCTTCAAACCTGGCGGAAAATGGACAAGCAAAGAAGACGAGCAA CTTCGAAAGGGAGTGACAGCGGTTGGAGAGTGCAACTGGGACACAATATC GACGCAGTTTCTGCACTCGCAACGCTCGGCCATCCAATGCTCGCATCGGT GGCAAAAAGTTTTGCGTCCAGGCCTTGTCAAAGGGCCCTGGACACAAGAA GAGGACGATATCATAGTCGTATGTCGGCAGAACGGGGTGACCGAGTGGAA AGAGATCGCCCTCCGCTTAGAAGGGAGGCTAGGGAAGCAGTGCCGAGACC GGTGGTTGAACCACTTGGACCCGGCCATCAGCAAGCACTACTGGACGGAG GAAGAGGACAAGGTCCTTGCCGAAGGCCGCAGGCTTTACGGGAACGCCTG GGCGAAAATAGCCAAGCTTCTTCCAGGAAGGCCGGAGAATTCTATCAAAA ATCGCTGGTATAGCGCACGCCGGGCTCAAGAGCGCTCCTTCGTTGCCCCG CCACGCTGGGACCTGAAATTTGAAAAGAAAGTTATCAGCGATTTTTGCGC TTCGTTTCGCAAGGAGGAGGTTAACGTGGACGACATTCTCGCCCATATCA TCGCCGTCCTCCGTGTCCGGGACCCAGTGGCTTACTCTCCGTCCCTCGCG CACATCAACCGCCAGAAGCTCCACCGACGCCTCACCGCGGGGCTGAAAAG AGAGGCGGCCAAGTATCAACCGGACTCCGACCTCCGGCAGGCCCTGAGGC GCGCCAAGTTGGTACAGCAGAAAGGAGGCTCCTGGGAGGGGTTGGCGGCT CGCAGGTTGGCTGCGGCACCCAATGGGCCCGTGCTTGCCTCCGACACCTC GCAAGGCCCGGCCATCCCCTCCTCGTCCTCCTCCACCTCACATCCCGCCC TGCCCCTTTCGGCGTCGCCCTGCTCTTCCTCTTTCCACCCGCCTCCCCCC CCGGGCGCCGATACCCATATGAGCCAGGTCATGATCCTCCTCCAGGATGC CTTGCGCGCGGAGACAGACTCCGGCCGAAGAGAGCTGCTGCAGCAAGCAG TCTCGGCGACCGTACAGTCCAACCGAGCCGCCGTCAACTACGTGGAAGGG ATCCTGGGCGGAGGCTTTGCCAAGCTGGACTTGCAGGACGCGGGGGACAG GGCCAGCCTGGTAGAGGCTCTGACCTCGGCGGTGCGGCGGGGCTTGTTTG TCTCGTAAGGGAATGATGAAAGGGAAACTCTCTGGAGTGGAGCGCAGGAA AGGATTATTGCATACAGGAAGGGGAAGGTCTTTTCTGGGTGTTCAGAACT CGATGTGGAGCCTTATCTCTCTATATGAAATGGCAAATCGATTTATTGGT GCATATTTTGTTGGGGAATAGCTCCATTTTCCCATCATCGTTTCATGTCA CACATCTAAAATAAAAATTGAAGGCGACAACGCGATGTTAGCCTGTAATT AACTTTACTTTCTGTACTTCGCACATATGAGAGGATTGCATTAGGACGAG TGCGCTCCATTGTTTTCCAAAACCCATTCCAAGCATTAAGCCC back to topprotein sequence of rna7742 >rna7742-protein ID=rna7742-protein|Name=rna7742|organism=Nannochloropsis gaditana|type=polypeptide|length=557bp MCDSTSTTKASSASSIIVSMNDEDDYLSDNSSCDSRMEKEMDAANMLSSL RMLTPRKLNEESLRPAPSGAGDRQSKWPAAHRPPASSTATLCPAATLKRE MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSAD LQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAI QCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLG KQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRP ENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDD ILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDL RQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSS TSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRE LLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAV RRGLFVS back to topmRNA from alignment at CM002473.1:225016..227492+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7742 ID=rna7742|Name=rna7742|organism=Nannochloropsis gaditana|type=mRNA|length=2477bp|location=Sequence derived from alignment at CM002473.1:225016..227492+ (Nannochloropsis gaditana) TAAGGTGCGGCCTTCCATGTGCGACTCCACTTCTACTACCAAAGCTTCGT
CAGCGTCCTCCATTATAGTCTCAATGAACGATGAAGACGACTACCTTTCA
GACAACAGCAGCTGCGACAGTCGCATGGAAAAAGAAATGGATGCAGCCAA
CATGCTATCCTCCCTTAGAATGGTAAGTACTTAGATGAAATGTAACTTTT
TCTTTGTCCATCGACGGCGAGCCTCATCGCAATTCCGTTGTACATTCCTC
ACCAAGAGAAGGACCTCCATCTATAGTTTAAAGTGAATATCAATTGTTTG
TTTCTTCGCTCAGCGACTTTACTAGCATCTCTGTCCCAAGATGTATCCTG
TGTTCGCACGCTGTTGCTGAAGCTCACAAAGTCCAACGAGCAGAGCCCCT
TTTACTCATAAGTTATCTTCCTGCGCCGATTCTGGAGCCCGTTCCTCATC
ATTAAATACCTATACTCTTTCCTTCAATACTTAATCAGCTCACTCCGCGC
AAGCTGAATGAAGAGTCGCtccgccctgctccctctgGGGCTGGTGATAG
GCAGAGCAAATGGCCCGCGGCGCACAGGCCTCCCGCATCTTCGACTGCGA
CCCTCTGCCCGGCGGCGACGCTCAAGCGAGAAATGAGTATGGCAAGTACA
ACTAGTGCCAGTAGTCTAaatagcagcagcagcaataaCAGTGACAGCAA
CAACGTGAAGGCTGGGCTCTGCAGCACCATTGAGAGCATGGGCCCGGGGT
CGGGGAGCGACATGGAGACTAAATCAGCGGATCTTCAGTCCATTCACCCC
ACTGCCTTCAAACCTGGCGGAAAATGGACAAGCAAAGAAGACGAGCAACT
TCGAAAGGGAGTGACAGCGGTTGGAGAGTGCAACTGGGACACAATATCGA
CGCAGTTTCTGCACTCGCAACGCTCGGCCATCCAATGCTCGCATCGGTGG
CAAAAAGTTTTGCGTCCAGGCCTTGTCAAAGGGCCCTGGAcacaagaaga
ggacgatatCATAGTCGTATGTCGGCAGAACGGGGTGACCGAGTGGAAAG
AGATCGCCCTCCGCTTAGAAGGGAGGCTAGGGAAGCAGTGCCGAGACCGG
TGGTTGAACCACTTGGACCCGGCCATCAGCAAGCACTActggacggagga
agaggacaaggtcCTTGCCGAAGGCCGCAGGCTTTACGGGAACGCCTGGG
CGAAAATAGCCAAGCTTCTTCCAGGAAGGTACGTGTGCTCCTCAAGGTCT
GGGTAGAGGGGGATCATCAAGTCCTGGCGACTTGGCATGGTAGTATGCAT
GACTGTCTTACCCCAAAGAAAGATCCGTCACTTTCCAGACTCACATGGTT
TTTTAATATCTCAGGCCGGAGAATTCTATCAAAAATCGCTGGTATAGCGC
ACGCCGGGCTCAAGAGCGCTCCTTCGTTGCCCCGCCACGCTGGGACCTGA
AATTTGAAAAGAAAGTTATCAGCGATTTTTGCGCTTCGTTtcgcaaggag
gaggttaacgTGGACGACATTCTCGCCCATATCATCGCCGTCCTCCGTGT
CCGGGACCCAGTGGCTTACTCTCCGTCCCTCGCGCACATCAACCGCCAGA
AGCTCCACCGACGCCTCACCGCGGGGCTGAAAAGAGAGGCGGCCAAGTAT
CAACCGGACTCCGACCTCCGGCAGGCCCTGAGGCGCGCCAAGTTGGTACA
GCAGAAAGGAGGCTCCTGGGAGGGGTTGGCGGCTCGCAGGTTGGCTGCGG
CACCCAATGGGCCCGTGCTTGCCTCCGACACCTCGCAAGGCCcggccatc
ccctcctcgtcctcctccacctcacatcccgccctgcccctttcgGCGTC
gccctgctcttcctctttccacccgcctccccccccgggcgcCGATACCC
ATATGAGCCAGGTCatgatcctcctccaggatgCCTTGCGCGCGGAGACA
GACTCCGGCCGAAGAGAGCTGCTGCAGCAAGCAGTCTCGGCGACCGTACA
GTCCAACCGAGCCGCCGTCAACTACGTGGAAGGGATCCTGGGCGGAGGCT
TTGCCAAGCTGGACTTGCAGGACGCGGGGGACAGGGCCAGCCTGGTAGAG
GCTCTGACCTCGGCGGTGCGGCGGGGCTTGTTTGTCTCGTAAGGGAATGA
TGAAAGGGAAACTCTCTGGAGTGGAGCGCAGGAAAGGATTATTGCataca
ggaaggggaaggtctTTTCTGGGTGTTCAGAACTCGATGTGGAGCCTTAT
CTCTCTATATGAAATGGCAAATCGATTTATTGGTGCATATTTTGTTGGGG
AATAGCTCCATTTTCCCATCATCGTTTCATGTCACACATCTAAAATAAAA
ATTGAAGGCGACAACGCGATGTTAGCCTGTAATTAACTTTACTTTCTGTA
CTTCGCACATATGAGAGGATTGCATTAGGACGAGTGCGCTCCATTGTTTT
CCAAAACCCATTCCAAGCATTAAGCCC back to topCoding sequence (CDS) from alignment at CM002473.1:225016..227492+ >rna7742 ID=rna7742|Name=rna7742|organism=Nannochloropsis gaditana|type=CDS|length=5022bp|location=Sequence derived from alignment at CM002473.1:225016..227492+ (Nannochloropsis gaditana) ATGTGCGACTCCACTTCTACTACCAAAGCTTCGTCAGCGTCCTCCATTAT AGTCTCAATGAACGATGAAGACGACTACCTTTCAGACAACAGCAGCTGCG ACAGTCGCATGGAAAAAGAAATGGATGCAGCCAACATGCTATCCTCCCTT AGAATGCTCACTCCGCGCAAGCTGAATGAAGAGTCGCtccgccctgctcc ctctgGGGCTGGTGATAGGCAGAGCAAATGGCCCGCGGCGCACAGGCCTC CCGCATCTTCGACTGCGACCCTCTGCCCGGCGGCGACGCTCAAGCGAGAA ATGAGTATGGCAAGTACAACTAGTGCCAGTAGTCTAaatagcagcagcag caataaCAGTGACAGCAACAACGTGAAGGCTGGGCTCTGCAGCACCATTG AGAGCATGGGCCCGGGGTCGGGGAGCGACATGGAGACTAAATCAGCGGAT CTTCAGTCCATTCACCCCACTGCCTTCAAACCTGGCGGAAAATGGACAAG CAAAGAAGACGAGCAACTTCGAAAGGGAGTGACAGCGGTTGGAGAGTGCA ACTGGGACACAATATCGACGCAGTTTCTGCACTCGCAACGCTCGGCCATC CAATGCTCGCATCGGTGGCAAAAAGTTTTGCGTCCAGGCCTTGTCAAAGG GCCCTGGAcacaagaagaggacgatatCATAGTCGTATGTCGGCAGAACG GGGTGACCGAGTGGAAAGAGATCGCCCTCCGCTTAGAAGGGAGGCTAGGG AAGCAGTGCCGAGACCGGTGGTTGAACCACTTGGACCCGGCCATCAGCAA GCACTActggacggaggaagaggacaaggtcCTTGCCGAAGGCCGCAGGC TTTACGGGAACGCCTGGGCGAAAATAGCCAAGCTTCTTCCAGGAAGGCCG GAGAATTCTATCAAAAATCGCTGGTATAGCGCACGCCGGGCTCAAGAGCG CTCCTTCGTTGCCCCGCCACGCTGGGACCTGAAATTTGAAAAGAAAGTTA TCAGCGATTTTTGCGCTTCGTTtcgcaaggaggaggttaacgTGGACGAC ATTCTCGCCCATATCATCGCCGTCCTCCGTGTCCGGGACCCAGTGGCTTA CTCTCCGTCCCTCGCGCACATCAACCGCCAGAAGCTCCACCGACGCCTCA CCGCGGGGCTGAAAAGAGAGGCGGCCAAGTATCAACCGGACTCCGACCTC CGGCAGGCCCTGAGGCGCGCCAAGTTGGTACAGCAGAAAGGAGGCTCCTG GGAGGGGTTGGCGGCTCGCAGGTTGGCTGCGGCACCCAATGGGCCCGTGC TTGCCTCCGACACCTCGCAAGGCCcggccatcccctcctcgtcctcctcc acctcacatcccgccctgcccctttcgGCGTCgccctgctcttcctcttt ccacccgcctccccccccgggcgcCGATACCCATATGAGCCAGGTCatga tcctcctccaggatgCCTTGCGCGCGGAGACAGACTCCGGCCGAAGAGAG CTGCTGCAGCAAGCAGTCTCGGCGACCGTACAGTCCAACCGAGCCGCCGT CAACTACGTGGAAGGGATCCTGGGCGGAGGCTTTGCCAAGCTGGACTTGC AGGACGCGGGGGACAGGGCCAGCCTGGTAGAGGCTCTGACCTCGGCGGTG CGGCGGGGCTTGTTTGTCTCGTAAATGTGCGACTCCACTTCTACTACCAA AGCTTCGTCAGCGTCCTCCATTATAGTCTCAATGAACGATGAAGACGACT ACCTTTCAGACAACAGCAGCTGCGACAGTCGCATGGAAAAAGAAATGGAT GCAGCCAACATGCTATCCTCCCTTAGAATGCTCACTCCGCGCAAGCTGAA TGAAGAGTCGCtccgccctgctccctctgGGGCTGGTGATAGGCAGAGCA AATGGCCCGCGGCGCACAGGCCTCCCGCATCTTCGACTGCGACCCTCTGC CCGGCGGCGACGCTCAAGCGAGAAATGAGTATGGCAAGTACAACTAGTGC CAGTAGTCTAaatagcagcagcagcaataaCAGTGACAGCAACAACGTGA AGGCTGGGCTCTGCAGCACCATTGAGAGCATGGGCCCGGGGTCGGGGAGC GACATGGAGACTAAATCAGCGGATCTTCAGTCCATTCACCCCACTGCCTT CAAACCTGGCGGAAAATGGACAAGCAAAGAAGACGAGCAACTTCGAAAGG GAGTGACAGCGGTTGGAGAGTGCAACTGGGACACAATATCGACGCAGTTT CTGCACTCGCAACGCTCGGCCATCCAATGCTCGCATCGGTGGCAAAAAGT TTTGCGTCCAGGCCTTGTCAAAGGGCCCTGGAcacaagaagaggacgata tCATAGTCGTATGTCGGCAGAACGGGGTGACCGAGTGGAAAGAGATCGCC CTCCGCTTAGAAGGGAGGCTAGGGAAGCAGTGCCGAGACCGGTGGTTGAA CCACTTGGACCCGGCCATCAGCAAGCACTActggacggaggaagaggaca aggtcCTTGCCGAAGGCCGCAGGCTTTACGGGAACGCCTGGGCGAAAATA GCCAAGCTTCTTCCAGGAAGGCCGGAGAATTCTATCAAAAATCGCTGGTA TAGCGCACGCCGGGCTCAAGAGCGCTCCTTCGTTGCCCCGCCACGCTGGG ACCTGAAATTTGAAAAGAAAGTTATCAGCGATTTTTGCGCTTCGTTtcgc aaggaggaggttaacgTGGACGACATTCTCGCCCATATCATCGCCGTCCT CCGTGTCCGGGACCCAGTGGCTTACTCTCCGTCCCTCGCGCACATCAACC GCCAGAAGCTCCACCGACGCCTCACCGCGGGGCTGAAAAGAGAGGCGGCC AAGTATCAACCGGACTCCGACCTCCGGCAGGCCCTGAGGCGCGCCAAGTT GGTACAGCAGAAAGGAGGCTCCTGGGAGGGGTTGGCGGCTCGCAGGTTGG CTGCGGCACCCAATGGGCCCGTGCTTGCCTCCGACACCTCGCAAGGCCcg gccatcccctcctcgtcctcctccacctcacatcccgccctgcccctttc gGCGTCgccctgctcttcctctttccacccgcctccccccccgggcgcCG ATACCCATATGAGCCAGGTCatgatcctcctccaggatgCCTTGCGCGCG GAGACAGACTCCGGCCGAAGAGAGCTGCTGCAGCAAGCAGTCTCGGCGAC CGTACAGTCCAACCGAGCCGCCGTCAACTACGTGGAAGGGATCCTGGGCG GAGGCTTTGCCAAGCTGGACTTGCAGGACGCGGGGGACAGGGCCAGCCTG GTAGAGGCTCTGACCTCGGCGGTGCGGCGGGGCTTGTTTGTCTCGTAAAT GTGCGACTCCACTTCTACTACCAAAGCTTCGTCAGCGTCCTCCATTATAG TCTCAATGAACGATGAAGACGACTACCTTTCAGACAACAGCAGCTGCGAC AGTCGCATGGAAAAAGAAATGGATGCAGCCAACATGCTATCCTCCCTTAG AATGCTCACTCCGCGCAAGCTGAATGAAGAGTCGCtccgccctgctccct ctgGGGCTGGTGATAGGCAGAGCAAATGGCCCGCGGCGCACAGGCCTCCC GCATCTTCGACTGCGACCCTCTGCCCGGCGGCGACGCTCAAGCGAGAAAT GAGTATGGCAAGTACAACTAGTGCCAGTAGTCTAaatagcagcagcagca ataaCAGTGACAGCAACAACGTGAAGGCTGGGCTCTGCAGCACCATTGAG AGCATGGGCCCGGGGTCGGGGAGCGACATGGAGACTAAATCAGCGGATCT TCAGTCCATTCACCCCACTGCCTTCAAACCTGGCGGAAAATGGACAAGCA AAGAAGACGAGCAACTTCGAAAGGGAGTGACAGCGGTTGGAGAGTGCAAC TGGGACACAATATCGACGCAGTTTCTGCACTCGCAACGCTCGGCCATCCA ATGCTCGCATCGGTGGCAAAAAGTTTTGCGTCCAGGCCTTGTCAAAGGGC CCTGGAcacaagaagaggacgatatCATAGTCGTATGTCGGCAGAACGGG GTGACCGAGTGGAAAGAGATCGCCCTCCGCTTAGAAGGGAGGCTAGGGAA GCAGTGCCGAGACCGGTGGTTGAACCACTTGGACCCGGCCATCAGCAAGC ACTActggacggaggaagaggacaaggtcCTTGCCGAAGGCCGCAGGCTT TACGGGAACGCCTGGGCGAAAATAGCCAAGCTTCTTCCAGGAAGGCCGGA GAATTCTATCAAAAATCGCTGGTATAGCGCACGCCGGGCTCAAGAGCGCT CCTTCGTTGCCCCGCCACGCTGGGACCTGAAATTTGAAAAGAAAGTTATC AGCGATTTTTGCGCTTCGTTtcgcaaggaggaggttaacgTGGACGACAT TCTCGCCCATATCATCGCCGTCCTCCGTGTCCGGGACCCAGTGGCTTACT CTCCGTCCCTCGCGCACATCAACCGCCAGAAGCTCCACCGACGCCTCACC GCGGGGCTGAAAAGAGAGGCGGCCAAGTATCAACCGGACTCCGACCTCCG GCAGGCCCTGAGGCGCGCCAAGTTGGTACAGCAGAAAGGAGGCTCCTGGG AGGGGTTGGCGGCTCGCAGGTTGGCTGCGGCACCCAATGGGCCCGTGCTT GCCTCCGACACCTCGCAAGGCCcggccatcccctcctcgtcctcctccac ctcacatcccgccctgcccctttcgGCGTCgccctgctcttcctctttcc acccgcctccccccccgggcgcCGATACCCATATGAGCCAGGTCatgatc ctcctccaggatgCCTTGCGCGCGGAGACAGACTCCGGCCGAAGAGAGCT GCTGCAGCAAGCAGTCTCGGCGACCGTACAGTCCAACCGAGCCGCCGTCA ACTACGTGGAAGGGATCCTGGGCGGAGGCTTTGCCAAGCTGGACTTGCAG GACGCGGGGGACAGGGCCAGCCTGGTAGAGGCTCTGACCTCGGCGGTGCG GCGGGGCTTGTTTGTCTCGTAA back to top
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