EWM22951.1, cds7721 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|585103683|gb|EWM22951.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1143.64 bits (2957), Expect = 0.000e+0 Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0
Query: 1 MCDSTSTTKASSASSIIVSMNDEDDYLSDNSSCDSRMEKEMDAANMLSSLRMLTPRKLNEESLRPAPSGAGDRQSKWPAAHRPPASSTATLCPAATLKREMSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 557
MCDSTSTTKASSASSIIVSMNDEDDYLSDNSSCDSRMEKEMDAANMLSSLRMLTPRKLNEESLRPAPSGAGDRQSKWPAAHRPPASSTATLCPAATLKREMSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS
Sbjct: 1 MCDSTSTTKASSASSIIVSMNDEDDYLSDNSSCDSRMEKEMDAANMLSSLRMLTPRKLNEESLRPAPSGAGDRQSKWPAAHRPPASSTATLCPAATLKREMSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 557
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|585103684|gb|EWM22952.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 943.34 bits (2437), Expect = 0.000e+0 Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query: 101 MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 557
MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS
Sbjct: 1 MSMASTTSASSLNSSSSNNSDSNNVKAGLCSTIESMGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFVAPPRWDLKFEKKVISDFCASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDLRQALRRAKLVQQKGGSWEGLAARRLAAAPNGPVLASDTSQGPAIPSSSSSTSHPALPLSASPCSSSFHPPPPPGADTHMSQVMILLQDALRAETDSGRRELLQQAVSATVQSNRAAVNYVEGILGGGFAKLDLQDAGDRASLVEALTSAVRRGLFVS 457
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|585100989|gb|EWM20993.1| (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 233.802 bits (595), Expect = 2.192e-64 Identity = 126/296 (42.57%), Postives = 166/296 (56.08%), Query Frame = 0
Query: 145 ETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERSFV---APPRWDLKFEKKVISDFC----------------------------ASFRKEEVNVDDILAHIIAVLRVRDPVAYSPSLAHINRQKLHRRLTAGLKREAAKYQPDSDL-RQALRRAK 408
E + L S+ PG WT ++D +LRK V + G NW IS + + QC +RW KVLRPGLVKGPW +EED +I+ C ++G+T+W EIA R+ GRLGKQCR+RWLNHLDP++SK W+ EEDK L G+ +GNAWAKIA LLPGR ENS+KNRW SA A+ R V PP WD E++ + ++C +S RK + D + ++ L +P Y L + + LH RL L+REA KY P L R LRRA+
Sbjct: 113 EGEDPRLVSVDEDEADPGPSWTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAAMARLRGSVDRSPPPDWDEDLERQTVREYCLRMAEAVGASEPQEGMARAAGAWPPASDSSIRKMSSKLADFIPSVMGALEGANPGLYG-GLGSAHIKPLHARLRVMLEREAEKYGPTHALYRSVLRRAQ 407
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|585108315|gb|EWM26309.1| (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 199.519 bits (506), Expect = 1.144e-51 Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0
Query: 161 PGG--KWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERS 318
PGG +W+ +ED LR V + G W IS +FL +RS +QC HRWQKVL+PGLVKGPWT EED II+ C Q G +W IA + GRLGKQCR+RW N+LDPA+ K WTEEED+VLAE + +GNAW KIA+ LPGR EN++KNRW S+ R +E++
Sbjct: 160 PGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKA 319
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|1002266211|ref|XP_015637435.1| (PREDICTED: uncharacterized protein LOC4339005 [Oryza sativa Japonica Group]) HSP 1 Score: 187.963 bits (476), Expect = 9.502e-49 Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 163 GKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIV-VCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQ 315
G WT +EDE+LRK V NW I+ F S R+ +QC HRWQKVL P L+KGPWTQEEDD+I+ + +++G +W IA L GR+GKQCR+RW NHLDP I K WT EE++VLA +YGN WA+IAKLLPGR +NSIKN W S+ R +
Sbjct: 59 GGWTPEEDEKLRKAVDIYNGKNWKKIAESF--SDRTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLRKK 210
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|222631846|gb|EEE63978.1| (hypothetical protein OsJ_18804 [Oryza sativa Japonica Group]) HSP 1 Score: 187.963 bits (476), Expect = 1.097e-48 Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 163 GKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIV-VCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQ 315
G WT +EDE+LRK V NW I+ F S R+ +QC HRWQKVL P L+KGPWTQEEDD+I+ + +++G +W IA L GR+GKQCR+RW NHLDP I K WT EE++VLA +YGN WA+IAKLLPGR +NSIKN W S+ R +
Sbjct: 56 GGWTPEEDEKLRKAVDIYNGKNWKKIAESF--SDRTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLRKK 207
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|125552603|gb|EAY98312.1| (hypothetical protein OsI_20220 [Oryza sativa Indica Group]) HSP 1 Score: 187.963 bits (476), Expect = 1.115e-48 Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 163 GKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIV-VCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQ 315
G WT +EDE+LRK V NW I+ F S R+ +QC HRWQKVL P L+KGPWTQEEDD+I+ + +++G +W IA L GR+GKQCR+RW NHLDP I K WT EE++VLA +YGN WA+IAKLLPGR +NSIKN W S+ R +
Sbjct: 57 GGWTPEEDEKLRKAVDIYNGKNWKKIAESF--SDRTEVQCLHRWQKVLDPELIKGPWTQEEDDVIINMVKKHGPKKWSVIARSLNGRIGKQCRERWHNHLDPQIRKEAWTVEEERVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSLRKK 208
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|474139829|gb|EMS56516.1| (Myb-related protein 3R-1 [Triticum urartu]) HSP 1 Score: 186.422 bits (472), Expect = 2.474e-48 Identity = 86/152 (56.58%), Postives = 107/152 (70.39%), Query Frame = 0
Query: 163 GKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVV-CRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARR 313
G WT +EDE LRK VT NW ++ F R+ +QC HRWQKVL P L+KGPWTQEEDD I+ +++G T+W IA L GR+GKQCR+RW NHLDP I K WT EE++VL + R++GN WA+IAKLLPGR +NSIKN W S+ R
Sbjct: 36 GGWTPEEDETLRKAVTVFKGKNWKRVAEFF--PDRTEVQCLHRWQKVLDPELIKGPWTQEEDDTIIQKVKEHGPTKWSVIARSLHGRIGKQCRERWHNHLDPQIRKEAWTFEEEQVLVDAHRMHGNKWAEIAKLLPGRTDNSIKNHWNSSVR 185
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|514749435|ref|XP_004961857.1| (PREDICTED: myb-related protein A-like [Setaria italica] >gi|955716056|ref|XP_014660295.1| PREDICTED: myb-related protein A-like [Setaria italica] >gi|944250912|gb|KQL15175.1| hypothetical protein SETIT_021484mg [Setaria italica]) HSP 1 Score: 187.193 bits (474), Expect = 2.824e-48 Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 0
Query: 163 GKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIV-VCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARR 313
G WT EDE+LRK V A NW I+ F R+++QC HRWQKVL P L+KGPWTQEEDDII+ + ++ G +W IA L+GR+GKQCR+RW NHLDP I K W+ EE++V+A+ RL+GN WA+IAKLLPGR +NSIKN W S+ R
Sbjct: 69 GGWTLDEDEKLRKAVGACNGKNWKKIAESF--PDRTSVQCLHRWQKVLNPELIKGPWTQEEDDIIINMVKKYGPKKWSLIARSLDGRIGKQCRERWHNHLDPQIIKEAWSVEEERVVADAHRLHGNKWAEIAKLLPGRTDNSIKNHWNSSLR 218
BLAST of EWM22951.1 vs. NCBI_GenBank
Match: gi|357133393|ref|XP_003568309.1| (PREDICTED: cyclin-D-binding Myb-like transcription factor 1 isoform X1 [Brachypodium distachyon] >gi|721637523|ref|XP_010231305.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1 isoform X1 [Brachypodium distachyon] >gi|944070429|gb|KQK05913.1| hypothetical protein BRADI_2g23320 [Brachypodium distachyon]) HSP 1 Score: 185.652 bits (470), Expect = 9.762e-48 Identity = 93/179 (51.96%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 136 MGPGSGSDMETKSADLQSIHPTAFKPGGKWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIV-VCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARR 313
M P S ++ S ++ P GG WT +EDE LRK V A NW I+ F R+ +QC HRWQKVL P L+KGPWTQEEDD IV + +++G +W IA L+GR+GKQCR+RW NHLDP I K WT EE++VL + L+GN WA+IAKLLPGR +NSIKN W S+ R
Sbjct: 38 MSPAVSSPADSISGRRRTSGPVRRAKGG-WTPEEDETLRKAVYAFKGKNWKKIAESF--PDRTEVQCLHRWQKVLDPELIKGPWTQEEDDTIVDMVKKHGPRKWSLIAKSLDGRIGKQCRERWHNHLDPQIRKEAWTTEEEQVLVKAHHLHGNRWAEIAKLLPGRTDNSIKNHWNSSVR 213 The following BLAST results are available for this feature:
BLAST of EWM22951.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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