Naga_100857g1, gene6903 (gene) Nannochloropsis gaditana

Overview
NameNaga_100857g1
Unique Namegene6903
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:537079..539029 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100857g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:537079..539029 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005198structural molecule activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0005829cytosol
GO:0005730nucleolus
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G00480NO19G00480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7139rna7139-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7140rna7140-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7139rna7139Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7140rna7140Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7139

>rna7139-protein ID=rna7139-protein|Name=rna7139|organism=Nannochloropsis gaditana|type=polypeptide|length=143bp
MRQLRHHEQKLLKKVDFLQWKSDQNIREIKILRRYHIQDREDYVKYNKIC
GHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLA
ASAFCRRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTGRGK
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protein sequence of rna7140

>rna7140-protein ID=rna7140-protein|Name=rna7140|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MRQLRHHEQKLLKKVDFLQWKSDQNIREIKILRRYHIQDREDYVKYNKIC
GHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLA
ASAFCRRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTVVTDPTFLVTR
SQEDFLTWVDSSKIKRAVVAYNDKLDDFDLLGN
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Synonyms
Publications