Naga_100062g8, gene5885 (gene) Nannochloropsis gaditana

Overview
NameNaga_100062g8
Unique Namegene5885
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:546313..549008 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100062g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:546313..549008 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0140110transcription regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02080NO14G02080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6092rna6092-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6091rna6091-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6092rna6092Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6091rna6091Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6092

>rna6092-protein ID=rna6092-protein|Name=rna6092|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp
MCRAWYPGSAAFEAIKKSSIATSSVRVYPRFEDGGKIRAGKKMISSIYFV
PFRQPYNAYKRRINLSSDKMASESTTEVATRETAEQQPFTDPHWLYYHGP
LRRDNVLEYFAHSKFYDRCSCNEELRMQGAIDVRQEHLAGMRGVQYLAEE
VPGPVPEDPIFVIRKVLRTDSEQPQVMDVYYVLQNMVYQAPTIFSVLNAR
LRRCAHMLNKAQKTLNRAVSYDCTGGGMEGEGAGTAGSGGGGKGGSDMYR
VARRASKEGKANKRARAAAVTASAEMYPPSSPQYGFPPYSWQPQYSEGEP
LVLVDGLDPSYALPPMMPPPPLPHLLIEPSSPTASSPPSKSPQQQPQSEE
RPRFASRYPGPSPLAAAMTHPHPENSVAVDRAMGILVSDGSEWCRWECEI
RAVGF
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protein sequence of rna6091

>rna6091-protein ID=rna6091-protein|Name=rna6091|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MCRAWYPGSAAFEAIKKSSIATSSVRVYPRFEDGGKIRAGKKMISSIYFV
PFRQPYNAYKRRINLSSDKMASESTTEVATRETAEQQPFTDPHWLYYHGP
LRRDNVLEYFAHSKFYDRCSCNEELRMQGAIDVRQEHLAGMRGVQYLAEE
VPGPVPEDPIFVIRKVLRTDSEQPQVMDVYYVLQNMVYQAPTIFSVLNAR
LRRCAHMLNKAQKTLNRAVSYDCTGGGMEGEGAGTAGSGGGGKGGSDMYR
VARRASKEGKANKRARAAAVTASAEMYPPSSPQYGFPPYSWQPQYSEGEP
LVLVDGLDPSYALPPMMPPPPLPHLLIEPSSPTASSPPSKSPQQQPQSEE
RPRFASRYPGPSPLAAAMTHPHPENSVAVDRAMGILRMEEVAGGPRGHKE
D
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Synonyms
Publications