Naga_100076g1, gene5793 (gene) Nannochloropsis gaditana

Overview
NameNaga_100076g1
Unique Namegene5793
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:313475..316494 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100076g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:313475..316494 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01180NO14G01180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5996rna5996-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5997rna5997-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5996rna5996Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5997rna5997Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5996

>rna5996-protein ID=rna5996-protein|Name=rna5996|organism=Nannochloropsis gaditana|type=polypeptide|length=324bp
MAFMDLNLPLYLCFAYPRRFGSDHNFYERPIPFLFSAHLFINSTGPKRRL
SHFKMMEQASWLQEHYYDADGESNRSSANSSIGSLGGLRSFDVEGSGGGN
AGEPSSSRRVVKGESDLRAIKALVQQLAGPSLPSLSSSPLTSEPLPASRS
NSSSHSSSPRSSHSSSLESLGADNDGAHGHHGSLSGTDGDSERAGARAVG
AGGFFQDVDLEAGESQRWSDAGPSGQTQDADRTLCLICYEDFPLEEEPPR
LPLPALHGPPDPPTRPNIPPTAPALPPRPSPRPACPHSFCRKCVVAYLET
RMREGRTDFPCPMRGDADCRHAFR
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protein sequence of rna5997

>rna5997-protein ID=rna5997-protein|Name=rna5997|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MLRPRSNLHGNSVGACTHLSVPVASDGRRAIACEGHGHRRRSAWYHQRGE
NRALHRARTASFPGPKRRLSHFKMMEQASWLQEHYYDADGESNRSSANSS
IGSLGGLRSFDVEGSGGGNAGEPSSSRRVVKGESDLRAIKALVQQLAGPS
LPSLSSSPLTSEPLPASRSNSSSHSSSPRSSHSSSLESLGADNDGAHGHH
GSLSGTDGDSERAGARAVGAGGFFQDVDLEAGESQRWSDAGPSGQTQDAD
RTLCLICYEDFPLEEEPPRLPLPALHGPPDPPTRPNIPPTAPALPPRPSP
RPACPHSFCRKCVVAYLETRMREGRTDFPCPMRGDADCRHAFR
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Synonyms
Publications