NO14G01180, NO14G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01180 vs. NCBI_GenBank
Match: EWM24689.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana]) HSP 1 Score: 442.2 bits (1136), Expect = 2.800e-120 Identity = 213/329 (64.74%), Postives = 253/329 (76.90%), Query Frame = 0 Query: 331 VFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIF-GCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALLGSALWLPVGVIWASLSKLCAGSPAAVSCLGGHWQMCDLIFPLVSGSRTFRQGNGAMGLVYVFVFLGSAPIVLSASLLLQVLWMPFVLFVFVVRASRRRRLQISFMLAPMLLAMQFLDLDGE 659 ++ ++HL +VDP + KH+ R L A+PSLRECP+C + +GGSK RP L C +CGL FCFLHATAH + + EG CR+Y RQ+ A ERAS +TV+RISKPCP+CKAP EK+GGCNHISC CR+EWCWLC+QRYTP+HYSPTNIF GCPG+QFVDFGGGA GCCC APLCR+ R+LLA ILLP P LG+VV ++G+ LWLPVGV+WA L KL A P+ + C G W DL+FPLVSGS TFRQ NGAMG VYVFVFLG+AP+VL ASL+LQVLWMP L V V+RASRRRRL+ SF+LAPMLL FLDLDGE Sbjct: 61 LYSENHLRALVDPDLFQKHEQRLKLRAQPSLRECPACQAVCEGGSKRRPLLVCAACGLSFCFLHATAHPVGK---------EGGAGCRRYLRQVEATERASKTTVRRISKPCPKCKAPTEKNGGCNHISCAQCRHEWCWLCEQRYTPYHYSPTNIFLGCPGAQFVDFGGGARGCCCRLGAPLCRLLRLLLAGILLPLPFALGVVVGVVGTVLWLPVGVLWACLGKLLATCPSGMPCFAGEWNAWDLLFPLVSGSHTFRQRNGAMGSVYVFVFLGAAPLVLVASLVLQVLWMPLALLVLVIRASRRRRLRPSFVLAPMLLITHFLDLDGE 380
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_012206935.1 (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >KDO22412.1 hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 141.4 bits (355), Expect = 1.000e-29 Identity = 75/251 (29.88%), Postives = 118/251 (47.01%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPCPMRGDAG--CNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALLG 539 C H +C CI YL ++I +G C G C + + +V + K++ + A RECP CH L G P + C CG FC+ H+ AH +C +Y+ +MRA ++ + + + +ISKPCP CK+P+EK+GGCN + C++C +CWLC D P H+ N+ GC G+Q + +A +R+LL L+ P + L + ++LG Sbjct: 72 CGHRFCADCIHGYLASKISDGLVAPKCFFADGDGRPCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHP--------------HSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSETAVEGPSTLSKMVA---FSWRILLCLVFGPPALALTLAFSILG 305
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_012212395.1 (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >KDO16895.1 hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 139.0 bits (349), Expect = 5.100e-29 Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPCPMRGDAG--CNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALLG 539 C H +C CI YL ++I +G C G C + + +V + K++ + A RECP CH L G P + C CG FC+ H+ AH +C +Y+ +MRA ++ + + + +ISKPCP CK+P+EK+GGCN + C++C +CWLC D P H+ N+ GC G+Q + ++ +R+LL L+ P + L + ++LG Sbjct: 33 CGHRFCADCIHGYLASKISDGLVAPKCFFADGDGRPCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHP--------------HSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSETAVEGPSTLSKIVS---FSWRLLLCLVFGPPALALTLAFSVLG 266
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_008604055.1 (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >EQC42632.1 hypothetical protein SDRG_00360 [Saprolegnia diclina VS20]) HSP 1 Score: 135.6 bits (340), Expect = 5.700e-28 Identity = 75/250 (30.00%), Postives = 114/250 (45.60%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPCPMRGDAG--CNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H +C CI YL +I +G C G C V + +V + K++ + A RECP CH L G P + C CG FC+ H+ AH +C Y+ +MRA ++ + + + +ISKPCP CK+P+EK+GGCN + C++C +CWLC D P H+ N+ GC G+Q + L +R+LL L+ P + L + ++L Sbjct: 184 CGHRFCADCIHGYLANKIADGLIAPKCFFADSDGHPCEAVIPPSDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNGPDDPHMDCMQCGESFCYTHSNAHP--------------NSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSETAVEGPSTVSKM---LSFSWRILLCLLFGPPALALTLAFSIL 416
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_002901747.1 (RING-finger-containing E3 ubiquitin ligase, putative [Phytophthora infestans T30-4] >EEY57137.1 RING-finger-containing E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 135.2 bits (339), Expect = 7.400e-28 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H +C C++ YLE +I EG+ C CN D + +V + KH R+CP C H+ + GS H P C +C +FCF+H++AH HSC +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G G+ G V R++ +I P +++ +V ++L Sbjct: 206 CGHLFCEACLRNYLEFKIKEGQVYPKCFFEISEDKTACNAEIAVDDIQSLVSDGVWQKHNKFKFNKEHELARQCPYCDHSQLCAGSDH-PECVCEACNREFCFVHSSAHQ--------------GHSCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCTTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGSTQKGVGI------VMRIIFFVIFGPPALVMAVVFSVL 437
BLAST of NO14G01180 vs. NCBI_GenBank
Match: CEL99806.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 134.4 bits (337), Expect = 1.300e-27 Identity = 71/223 (31.84%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC-------PMRGDAG---CNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVK---GGSK----HRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQR----YTPFHYSPTNIFGCPGSQFVD 496 C H C C K Y+ +RI EG+ C P A CN + ++D ++ K++ + EP+ R CP C LV GG + + +TC CG +FC+ HA AH +C ++R R ERA+ + + KPCP C P+EK GGCNH+ C +C +CW+C ++ PFHY+ N+ GCP Q D Sbjct: 155 CGHQCCVCCFKDYISSRIAEGQISFHCFHVIPPDPPSAPAPVRLCNSRLDESEFVPLLDHTVVQKYRRYKRIREEPTCRSCPKCDHLVSSSGGGWRLSGGRQADMTCDKCGYRFCYFHADAHP--------------GMTCAAHERLHRHEERANRTVIATTCKPCPGCSQPVEKAGGCNHMICTNCGVSFCWICGRKVGEGQFPFHYAWWNVLGCPTRQMAD 363
BLAST of NO14G01180 vs. NCBI_GenBank
Match: OQR96619.1 (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata]) HSP 1 Score: 134.4 bits (337), Expect = 1.300e-27 Identity = 75/255 (29.41%), Postives = 119/255 (46.67%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC----PMRGDA---GCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYT----PFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H +C CI YLE++I++G C GD C + D + +V ++ K++ + RECP C+ + G + P + C C FC+ H+ AH SC +Y+ +MRA E+ + + + +ISKPCP CK P+EK+GGCN + CI C +CWLC ++ P H+ N+ GC G+Q + C L +R+LL I P ++ + ++L Sbjct: 477 CGHRFCVECINAYLESKINDGLIHPKCFYMPTATGDTEAQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPNDPVMECIKCSKIFCYTHSNAHPTT--------------SCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWNLRGCAGAQMSETASEGPSTCSKL---LSFSWRILLCAIFGPPAFVMAVTFSIL 714
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_009519281.1 (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >EGZ23993.1 hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae]) HSP 1 Score: 133.3 bits (334), Expect = 2.800e-27 Identity = 80/252 (31.75%), Postives = 120/252 (47.62%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPCPMRGD---AGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C+K YLE +I EG+ C A C D + +V + K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y +QM AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G G I V R+L ++ P +L +V +L Sbjct: 224 CGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAACKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACSREFCFVHSNAH-------------QGR-TCAEYDKQMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQMADIEG--QGTTQKGIG---MVMRILFFVLFGPPAFVLAVVFCIL 455
BLAST of NO14G01180 vs. NCBI_GenBank
Match: OQR83287.1 (RING-finger-containing E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 133.3 bits (334), Expect = 2.800e-27 Identity = 72/251 (28.69%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H +C C+ YL ++I +G C G C + +V + K++ + RECP CH + G P + C +C FC+ H+ AH +C +Y+ +MRA E+ + + + +ISKPCP CK+P+EK+GGCN + C++C +CWLC D P H+ N+ GC G+Q + + +R+LL LI P + L +V ++L Sbjct: 162 CGHRFCVECLNGYLASKIKDGLVTPQCFFTAADGAPPCGVAIATSDIQALVPVDLFDKYEKFKFIKTHADARECPYCHHVQVGRGPDDPVIDCAACHETFCYTHSNAHPTS--------------TCLEYEAKMRAEEKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSESAADGPSTAAKVAS---FTWRILLCLIFGPPALALTLVFSVL 395
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_024571718.1 (Predicted E3 ubiquitin ligase [Plasmopara halstedii] >XP_024582224.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii] >CEG45855.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii] >CEG35349.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii]) HSP 1 Score: 132.1 bits (331), Expect = 6.300e-27 Identity = 71/213 (33.33%), Postives = 106/213 (49.77%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGG 499 C H +C C+K++LE +I EG+ C + +A CN D + +V + K+ R+CP C H+ V GS++ P C +C +FCFLH AH DE +C Y+R M A+E+ + S + +IS+ CP C+ +EK GGCN + C+ C +CW+C D P H+ NI GC G+Q +D G Sbjct: 260 CGHIFCQACLKSFLEFKIKEGQVYPKCFFEISKNEAACNAAISVDDIQALVSQRVWQKYTTFKFNKDHELARQCPYCDHSQVCAGSEN-PECICEACNREFCFLHNNAH-QDE-------------TCAAYERSMIAIEKLNNSLISKISRRCPGCQNYVEKIGGCNQMKCVVCSTSFCWICLKIIDDSVFPEHFQWWNIRGCAGNQMLDNEG 457 The following BLAST results are available for this feature:
BLAST of NO14G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01180 ID=NO14G01180|Name=NO14G01180|organism=Nannochloropsis oceanica|type=gene|length=4654bpback to top protein sequence of NO14G01180.1 >NO14G01180.1-protein ID=NO14G01180.1-protein|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=659bpback to top protein sequence of NO14G01180.2 >NO14G01180.2-protein ID=NO14G01180.2-protein|Name=NO14G01180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=538bpback to top Synonyms
Publications
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